RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 RFC4P35249 363 aa28.84■■■□□ 2.21
UBE2D3-214ENST00000503282 MSL1Q68DK7 614 aa28.84■■■□□ 2.21
UBE2D3-214ENST00000503282 ARXQ96QS3 562 aa28.84■■■□□ 2.21
UBE2D3-214ENST00000503282 TRIM35Q9UPQ4 493 aa28.83■■■□□ 2.21
UBE2D3-214ENST00000503282 SNRPA1P09661 255 aaKnown RBP28.81■■■□□ 2.2
UBE2D3-214ENST00000503282 ZBTB1Q9Y2K1 713 aa28.8■■■□□ 2.2
UBE2D3-214ENST00000503282 CANXP27824 592 aaKnown RBP28.79■■■□□ 2.2
UBE2D3-214ENST00000503282 TSPYL4Q9UJ04 414 aa28.79■■■□□ 2.2
UBE2D3-214ENST00000503282 BABAM1Q9NWV8 329 aa28.78■■■□□ 2.2
UBE2D3-214ENST00000503282 SOS1Q07889 1333 aaPredicted RBP28.77■■■□□ 2.2
UBE2D3-214ENST00000503282 USP16Q9Y5T5 823 aa28.77■■■□□ 2.2
UBE2D3-214ENST00000503282 COL24A1Q17RW2 1714 aa28.77■■■□□ 2.2
UBE2D3-214ENST00000503282 PRAMEF22A3QJZ6 481 aa28.76■■■□□ 2.19
UBE2D3-214ENST00000503282 EIF4A1P60842 406 aaKnown RBP28.76■■■□□ 2.19
UBE2D3-214ENST00000503282 NLGN1Q8N2Q7 840 aa28.76■■■□□ 2.19
UBE2D3-214ENST00000503282 LAS1LQ9Y4W2 734 aaKnown RBP28.75■■■□□ 2.19
UBE2D3-214ENST00000503282 KDM3BQ7LBC6 1761 aa28.75■■■□□ 2.19
UBE2D3-214ENST00000503282 A1BGP04217 495 aa28.74■■■□□ 2.19
UBE2D3-214ENST00000503282 NPM2Q86SE8 214 aaKnown RBP28.74■■■□□ 2.19
UBE2D3-214ENST00000503282 FAM9BQ8IZU0 186 aa28.74■■■□□ 2.19
UBE2D3-214ENST00000503282 FHDC1Q9C0D6 1143 aaPredicted RBP28.74■■■□□ 2.19
UBE2D3-214ENST00000503282 ZPR1O75312 459 aa28.73■■■□□ 2.19
UBE2D3-214ENST00000503282 GIGYF1O75420 1035 aaPredicted RBP28.72■■■□□ 2.19
UBE2D3-214ENST00000503282 GYS1P13807 737 aa28.72■■■□□ 2.19
UBE2D3-214ENST00000503282 KLHL34Q8N239 644 aa28.72■■■□□ 2.19
UBE2D3-214ENST00000503282 ZNF330Q9Y3S2 320 aaPredicted RBP28.72■■■□□ 2.19
UBE2D3-214ENST00000503282 COL15A1P39059 1388 aa28.72■■■□□ 2.19
UBE2D3-214ENST00000503282 USP42Q9H9J4 1324 aaKnown RBP28.71■■■□□ 2.19
UBE2D3-214ENST00000503282 A0A087WZG4 1122 aa28.71■■■□□ 2.19
UBE2D3-214ENST00000503282 IL6STP40189 918 aaPredicted RBP28.71■■■□□ 2.19
UBE2D3-214ENST00000503282 EIF5P55010 431 aaKnown RBP28.71■■■□□ 2.19
UBE2D3-214ENST00000503282 CALD1Q05682 793 aaKnown RBP28.71■■■□□ 2.19
UBE2D3-214ENST00000503282 SRP68Q9UHB9 627 aaKnown RBP28.71■■■□□ 2.19
UBE2D3-214ENST00000503282 C4AP0C0L4 1744 aa28.7■■■□□ 2.19
UBE2D3-214ENST00000503282 CHL1O00533 1208 aa28.7■■■□□ 2.18
UBE2D3-214ENST00000503282 SYT17Q9BSW7 474 aa28.7■■■□□ 2.18
UBE2D3-214ENST00000503282 NARFQ9UHQ1 456 aa28.69■■■□□ 2.18
UBE2D3-214ENST00000503282 MMP10P09238 476 aa28.68■■■□□ 2.18
UBE2D3-214ENST00000503282 USPL1Q5W0Q7 1092 aa28.68■■■□□ 2.18
UBE2D3-214ENST00000503282 CFAP44Q96MT7 982 aa28.68■■■□□ 2.18
UBE2D3-214ENST00000503282 SENP3-EIF4A1A0A087X0R7 540 aa28.67■■■□□ 2.18
UBE2D3-214ENST00000503282 DIEXFQ68CQ4 756 aaKnown RBP28.66■■■□□ 2.18
UBE2D3-214ENST00000503282 PIP4K2AP48426 406 aaPredicted RBP28.65■■■□□ 2.18
UBE2D3-214ENST00000503282 FKBP8Q14318 412 aa28.65■■■□□ 2.18
UBE2D3-214ENST00000503282 CCDC27Q2M243 656 aa28.64■■■□□ 2.18
UBE2D3-214ENST00000503282 GNAI1P63096 354 aa28.63■■■□□ 2.17
UBE2D3-214ENST00000503282 NCBP3Q53F19 620 aaKnown RBP28.63■■■□□ 2.17
UBE2D3-214ENST00000503282 IFT57Q9NWB7 429 aa28.63■■■□□ 2.17
UBE2D3-214ENST00000503282 TBC1D2BQ9UPU7 963 aa28.63■■■□□ 2.17
UBE2D3-214ENST00000503282 PARP3Q9Y6F1 533 aa28.63■■■□□ 2.17
UBE2D3-214ENST00000503282 DCAF8L1A6NGE4 600 aa28.61■■■□□ 2.17
UBE2D3-214ENST00000503282 NBPF26B4DH59 902 aa28.61■■■□□ 2.17
UBE2D3-214ENST00000503282 CCER2I3L3R5 266 aa28.61■■■□□ 2.17
UBE2D3-214ENST00000503282 NBPF10Q6P3W6 841 aaKnown RBP28.61■■■□□ 2.17
UBE2D3-214ENST00000503282 WWC1Q8IX03 1113 aa28.61■■■□□ 2.17
UBE2D3-214ENST00000503282 NBPF15Q8N660 670 aa28.61■■■□□ 2.17
UBE2D3-214ENST00000503282 LAMB4A4D0S4 1761 aa28.6■■■□□ 2.17
UBE2D3-214ENST00000503282 ZNF853P0CG23 659 aa28.6■■■□□ 2.17
UBE2D3-214ENST00000503282 EIF2S2P20042 333 aaKnown RBP28.6■■■□□ 2.17
UBE2D3-214ENST00000503282 DZIP3Q86Y13 1208 aaKnown RBP28.6■■■□□ 2.17
UBE2D3-214ENST00000503282 MBIPQ9NS73 344 aa28.6■■■□□ 2.17
UBE2D3-214ENST00000503282 SALL2Q9Y467 1007 aaPredicted RBP28.6■■■□□ 2.17
UBE2D3-214ENST00000503282 CD2APQ9Y5K6 639 aa28.6■■■□□ 2.17
UBE2D3-214ENST00000503282 TM4SF1P30408 202 aa28.58■■■□□ 2.17
UBE2D3-214ENST00000503282 BCL2L12Q9HB09 334 aa28.58■■■□□ 2.17
UBE2D3-214ENST00000503282 MYL6BP14649 208 aa28.56■■■□□ 2.16
UBE2D3-214ENST00000503282 KRT24Q2M2I5 525 aa28.56■■■□□ 2.16
UBE2D3-214ENST00000503282 ERBB4Q15303 1308 aa28.55■■■□□ 2.16
UBE2D3-214ENST00000503282 NGEFQ8N5V2 710 aa28.55■■■□□ 2.16
UBE2D3-214ENST00000503282 NLGN2Q8NFZ4 835 aa28.55■■■□□ 2.16
UBE2D3-214ENST00000503282 CAMTA2O94983 1202 aa28.54■■■□□ 2.16
UBE2D3-214ENST00000503282 NFIXQ14938 502 aa28.54■■■□□ 2.16
UBE2D3-214ENST00000503282 DDR1Q08345 913 aa28.53■■■□□ 2.16
UBE2D3-214ENST00000503282 BICDL1Q6ZP65 573 aa28.53■■■□□ 2.16
UBE2D3-214ENST00000503282 POLRMTO00411 1230 aaKnown RBP28.52■■■□□ 2.16
UBE2D3-214ENST00000503282 HOXB7P09629 217 aa28.52■■■□□ 2.16
UBE2D3-214ENST00000503282 NECTIN2Q92692 538 aa28.52■■■□□ 2.16
UBE2D3-214ENST00000503282 DUSP27Q5VZP5 1158 aa28.51■■■□□ 2.15
UBE2D3-214ENST00000503282 TBC1D9BQ66K14 1250 aa28.51■■■□□ 2.15
UBE2D3-214ENST00000503282 ZNF652Q9Y2D9 606 aa28.51■■■□□ 2.15
UBE2D3-214ENST00000503282 IL16Q14005 1332 aa28.5■■■□□ 2.15
UBE2D3-214ENST00000503282 CLEC4GQ6UXB4 293 aa28.5■■■□□ 2.15
UBE2D3-214ENST00000503282 WDR63Q8IWG1 891 aa28.5■■■□□ 2.15
UBE2D3-214ENST00000503282 HDGFL1Q5TGJ6 251 aa28.49■■■□□ 2.15
UBE2D3-214ENST00000503282 SCN7AQ01118 1682 aa28.48■■■□□ 2.15
UBE2D3-214ENST00000503282 SERPINB2P05120 415 aa28.48■■■□□ 2.15
UBE2D3-214ENST00000503282 PDIA6Q15084 440 aa28.48■■■□□ 2.15
UBE2D3-214ENST00000503282 KIF6Q6ZMV9 814 aa28.48■■■□□ 2.15
UBE2D3-214ENST00000503282 MIER1Q8N108 512 aa28.48■■■□□ 2.15
UBE2D3-214ENST00000503282 SETDB2Q96T68 719 aa28.48■■■□□ 2.15
UBE2D3-214ENST00000503282 ELL2O00472 640 aaPredicted RBP28.47■■■□□ 2.15
UBE2D3-214ENST00000503282 TSR2Q969E8 191 aaKnown RBP28.47■■■□□ 2.15
UBE2D3-214ENST00000503282 RGL2O15211 777 aa28.46■■■□□ 2.15
UBE2D3-214ENST00000503282 TGFB2P61812 414 aa28.46■■■□□ 2.15
UBE2D3-214ENST00000503282 GPR162Q16538 588 aa28.46■■■□□ 2.15
UBE2D3-214ENST00000503282 PELP1Q8IZL8 1130 aaKnown RBP28.46■■■□□ 2.15
UBE2D3-214ENST00000503282 ANXA1P04083 346 aa28.45■■■□□ 2.14
UBE2D3-214ENST00000503282 TTLL7Q6ZT98 887 aa28.45■■■□□ 2.14
UBE2D3-214ENST00000503282 DDX21Q9NR30 783 aaKnown RBP eCLIP28.45■■■□□ 2.14
UBE2D3-214ENST00000503282 BCORQ6W2J9 1755 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms