RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 STK31Q9BXU1 1019 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 MTMR7Q9Y216 660 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 DDIT3P35638 169 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 CBX1P83916 185 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 GAS2L3Q86XJ1 694 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 TNPO1Q92973 898 aaKnown RBP6.29□□□□□ -1.4
CLDND1-208ENST00000503004 SETD1BQ9UPS6 1966 aaKnown RBP6.29□□□□□ -1.4
CLDND1-208ENST00000503004 NCOA3Q9Y6Q9 1424 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 PNMA6EA0A0J9YXQ4 647 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 K7ELQ4 463 aaPredicted RBP6.29□□□□□ -1.4
CLDND1-208ENST00000503004 DYNC1I1O14576 645 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 XPCQ01831 940 aaPredicted RBP6.29□□□□□ -1.4
CLDND1-208ENST00000503004 TAF3Q5VWG9 929 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 SLC24A3Q9HC58 644 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 HDAC5Q9UQL6 1122 aa6.29□□□□□ -1.4
CLDND1-208ENST00000503004 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
CLDND1-208ENST00000503004 EIF2S2P20042 333 aaKnown RBP6.28□□□□□ -1.4
CLDND1-208ENST00000503004 CCT4P50991 539 aaKnown RBP6.28□□□□□ -1.4
CLDND1-208ENST00000503004 ESCO1Q5FWF5 840 aa6.28□□□□□ -1.4
CLDND1-208ENST00000503004 NBPF6Q5VWK0 638 aa6.28□□□□□ -1.4
CLDND1-208ENST00000503004 TMED8Q6PL24 325 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-208ENST00000503004 NBPF4Q96M43 638 aa6.28□□□□□ -1.4
CLDND1-208ENST00000503004 USP26Q9BXU7 913 aa6.28□□□□□ -1.4
CLDND1-208ENST00000503004 PHF8Q9UPP1 1060 aa6.28□□□□□ -1.4
CLDND1-208ENST00000503004 FMN2Q9NZ56 1722 aa6.27□□□□□ -1.4
CLDND1-208ENST00000503004 HMMRO75330 724 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 GNAI2P04899 355 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 ATP2B3Q16720 1220 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 CCDC30Q5VVM6 783 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 ZSCAN30Q86W11 494 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 ZC3H15Q8WU90 426 aaKnown RBP6.27□□□□□ -1.41
CLDND1-208ENST00000503004 JARID2Q92833 1246 aaPredicted RBP6.27□□□□□ -1.41
CLDND1-208ENST00000503004 LRRC59Q96AG4 307 aaKnown RBP6.27□□□□□ -1.41
CLDND1-208ENST00000503004 LGR6Q9HBX8 967 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 MAP3K5Q99683 1374 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 ANXA1P04083 346 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 PDE1AP54750 535 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 TAF7Q15545 349 aaPredicted RBP6.27□□□□□ -1.41
CLDND1-208ENST00000503004 HDGFL1Q5TGJ6 251 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 LRRFIP2Q9Y608 721 aaKnown RBP6.27□□□□□ -1.41
CLDND1-208ENST00000503004 FER1L4A9Z1Z3 1794 aa6.27□□□□□ -1.41
CLDND1-208ENST00000503004 KCNQ3O43525 872 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 MSNP26038 577 aaKnown RBP6.26□□□□□ -1.41
CLDND1-208ENST00000503004 SSFA2P28290 1259 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 PSME1Q06323 249 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 SLC20A2Q08357 652 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 RAB3GAP1Q15042 981 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 HS6ST3Q8IZP7 471 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 NWD1Q149M9 1564 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 PKP1Q13835 747 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 TSC1Q92574 1164 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 USP44Q9H0E7 712 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 IL1RAPL2Q9NP60 686 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 DDX11L8A8MPP1 907 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 HTATSF1O43719 755 aaKnown RBP6.26□□□□□ -1.41
CLDND1-208ENST00000503004 KCNJ4P48050 445 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 ORAI2Q96SN7 254 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 LRRCC1Q9C099 1032 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 ANKARQ7Z5J8 1434 aa6.26□□□□□ -1.41
CLDND1-208ENST00000503004 XRN1Q8IZH2 1706 aaKnown RBP6.25□□□□□ -1.41
CLDND1-208ENST00000503004 PRR29P0C7W0 189 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 CASC1Q6TDU7 716 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 MPRIPQ6WCQ1 1025 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 ANKLE2Q86XL3 938 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 RILPL2Q969X0 211 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 TRAIPQ9BWF2 469 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 AK9Q5TCS8 1911 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 TRIM6-TRIM34B2RNG4 842 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 CLGNO14967 610 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 GNAI3P08754 354 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 NBPF7P0C2Y1 421 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-208ENST00000503004 MX1P20591 662 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 RABEP1Q15276 862 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 UNC5CLQ8IV45 518 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 ZNF710Q8N1W2 664 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 ZGPATQ8N5A5 531 aaKnown RBP6.25□□□□□ -1.41
CLDND1-208ENST00000503004 IP6K1Q92551 441 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 CHPF2Q9P2E5 772 aa6.25□□□□□ -1.41
CLDND1-208ENST00000503004 CIZ1Q9ULV3 898 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-208ENST00000503004 PI4KAP2A4QPH2 592 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 FAM177BA6PVY3 158 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 ERC2O15083 957 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 UBTFL1P0CB47 393 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-208ENST00000503004 FAM193AP78312 1265 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 ATP8B2P98198 1209 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 PI4KAP1Q8N8J0 262 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 GBP4Q96PP9 640 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 PPP1R9BQ96SB3 815 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 DNAJC2Q99543 621 aaKnown RBP6.24□□□□□ -1.41
CLDND1-208ENST00000503004 OSBPL3Q9H4L5 887 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 MARF1Q9Y4F3 1742 aaKnown RBP6.24□□□□□ -1.41
CLDND1-208ENST00000503004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-208ENST00000503004 REC8O95072 547 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 MAP4K4O95819 1239 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-208ENST00000503004 FOXD4L5Q5VV16 416 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-208ENST00000503004 NUTM1Q86Y26 1132 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 FOXD4L4Q8WXT5 416 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-208ENST00000503004 CHAMP1Q96JM3 812 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 IL25Q9H293 177 aa6.24□□□□□ -1.41
CLDND1-208ENST00000503004 SALL3Q9BXA9 1300 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms