RNA–Protein interactions for RNA: ENST00000502985.5

NR1I3-217, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-217ENST00000502985 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
NR1I3-217ENST00000502985 CYP19A1P11511 503 aaPredicted RBP13.52□□□□□ -0.25
NR1I3-217ENST00000502985 SLC15A2Q16348 729 aa13.52□□□□□ -0.25
NR1I3-217ENST00000502985 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.25
NR1I3-217ENST00000502985 TFCP2L1Q9NZI6 479 aa13.52□□□□□ -0.25
NR1I3-217ENST00000502985 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
NR1I3-217ENST00000502985 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
NR1I3-217ENST00000502985 PIP4K2AP48426 406 aaPredicted RBP13.51□□□□□ -0.25
NR1I3-217ENST00000502985 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
NR1I3-217ENST00000502985 NECTIN2Q92692 538 aa13.51□□□□□ -0.25
NR1I3-217ENST00000502985 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
NR1I3-217ENST00000502985 ZBTB1Q9Y2K1 713 aa13.51□□□□□ -0.25
NR1I3-217ENST00000502985 USP16Q9Y5T5 823 aa13.51□□□□□ -0.25
NR1I3-217ENST00000502985 ELL2O00472 640 aaPredicted RBP13.5□□□□□ -0.25
NR1I3-217ENST00000502985 STARD3NLO95772 234 aa13.5□□□□□ -0.25
NR1I3-217ENST00000502985 INTS5Q6P9B9 1019 aaKnown RBP13.5□□□□□ -0.25
NR1I3-217ENST00000502985 CDCA7LQ96GN5 454 aa13.5□□□□□ -0.25
NR1I3-217ENST00000502985 YTHDC1Q96MU7 727 aaKnown RBP13.5□□□□□ -0.25
NR1I3-217ENST00000502985 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
NR1I3-217ENST00000502985 BCORQ6W2J9 1755 aa13.5□□□□□ -0.25
NR1I3-217ENST00000502985 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
NR1I3-217ENST00000502985 PNPLA7Q6ZV29 1317 aa13.49□□□□□ -0.25
NR1I3-217ENST00000502985 A1BGP04217 495 aa13.49□□□□□ -0.25
NR1I3-217ENST00000502985 EIF2S2P20042 333 aaKnown RBP13.49□□□□□ -0.25
NR1I3-217ENST00000502985 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
NR1I3-217ENST00000502985 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
NR1I3-217ENST00000502985 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
NR1I3-217ENST00000502985 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
NR1I3-217ENST00000502985 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
NR1I3-217ENST00000502985 ZNF330Q9Y3S2 320 aaPredicted RBP13.49□□□□□ -0.25
NR1I3-217ENST00000502985 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
NR1I3-217ENST00000502985 MSH5O43196 834 aa13.48□□□□□ -0.25
NR1I3-217ENST00000502985 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
NR1I3-217ENST00000502985 TSPYL6Q8N831 410 aa13.48□□□□□ -0.25
NR1I3-217ENST00000502985 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
NR1I3-217ENST00000502985 COL15A1P39059 1388 aa13.47□□□□□ -0.25
NR1I3-217ENST00000502985 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
NR1I3-217ENST00000502985 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
NR1I3-217ENST00000502985 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
NR1I3-217ENST00000502985 E9PSI1 815 aa13.47□□□□□ -0.25
NR1I3-217ENST00000502985 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
NR1I3-217ENST00000502985 EXOSC9Q06265 439 aaKnown RBP13.47□□□□□ -0.25
NR1I3-217ENST00000502985 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
NR1I3-217ENST00000502985 SSFA2P28290 1259 aa13.46□□□□□ -0.25
NR1I3-217ENST00000502985 SLFN5Q08AF3 891 aa13.46□□□□□ -0.25
NR1I3-217ENST00000502985 HDGFL1Q5TGJ6 251 aa13.46□□□□□ -0.25
NR1I3-217ENST00000502985 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-217ENST00000502985 NBPF26B4DH59 902 aa13.45□□□□□ -0.26
NR1I3-217ENST00000502985 ANXA1P04083 346 aa13.45□□□□□ -0.26
NR1I3-217ENST00000502985 MYL6BP14649 208 aa13.45□□□□□ -0.26
NR1I3-217ENST00000502985 TWISTNBQ3B726 338 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-217ENST00000502985 NBPF10Q6P3W6 841 aaKnown RBP13.45□□□□□ -0.26
NR1I3-217ENST00000502985 NBPF15Q8N660 670 aa13.45□□□□□ -0.26
NR1I3-217ENST00000502985 NUP98P52948 1817 aa13.45□□□□□ -0.26
NR1I3-217ENST00000502985 TCERG1O14776 1098 aaKnown RBP13.44□□□□□ -0.26
NR1I3-217ENST00000502985 HOXB7P09629 217 aa13.44□□□□□ -0.26
NR1I3-217ENST00000502985 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
NR1I3-217ENST00000502985 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
NR1I3-217ENST00000502985 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
NR1I3-217ENST00000502985 ARXQ96QS3 562 aa13.44□□□□□ -0.26
NR1I3-217ENST00000502985 CHPF2Q9P2E5 772 aa13.44□□□□□ -0.26
NR1I3-217ENST00000502985 ARFGEF2Q9Y6D5 1785 aa13.44□□□□□ -0.26
NR1I3-217ENST00000502985 COL24A1Q17RW2 1714 aa13.44□□□□□ -0.26
NR1I3-217ENST00000502985 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
NR1I3-217ENST00000502985 ZBTB7AO95365 584 aa13.43□□□□□ -0.26
NR1I3-217ENST00000502985 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
NR1I3-217ENST00000502985 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
NR1I3-217ENST00000502985 SRP68Q9UHB9 627 aaKnown RBP13.43□□□□□ -0.26
NR1I3-217ENST00000502985 ADRA2BP18089 450 aa13.42□□□□□ -0.26
NR1I3-217ENST00000502985 RFC4P35249 363 aa13.42□□□□□ -0.26
NR1I3-217ENST00000502985 IL6STP40189 918 aaPredicted RBP13.42□□□□□ -0.26
NR1I3-217ENST00000502985 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
NR1I3-217ENST00000502985 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
NR1I3-217ENST00000502985 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
NR1I3-217ENST00000502985 ERBB4Q15303 1308 aa13.41□□□□□ -0.26
NR1I3-217ENST00000502985 PDIA6Q15084 440 aa13.41□□□□□ -0.26
NR1I3-217ENST00000502985 USP42Q9H9J4 1324 aaKnown RBP13.4□□□□□ -0.26
NR1I3-217ENST00000502985 VAMP4O75379 141 aa13.4□□□□□ -0.26
NR1I3-217ENST00000502985 AIMP1Q12904 312 aaKnown RBP13.4□□□□□ -0.26
NR1I3-217ENST00000502985 CCDC30Q5VVM6 783 aa13.4□□□□□ -0.26
NR1I3-217ENST00000502985 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.26
NR1I3-217ENST00000502985 DZIP3Q86Y13 1208 aaKnown RBP13.4□□□□□ -0.26
NR1I3-217ENST00000502985 TRMT2AQ8IZ69 625 aaKnown RBP13.4□□□□□ -0.26
NR1I3-217ENST00000502985 DDX21Q9NR30 783 aaKnown RBP eCLIP13.4□□□□□ -0.26
NR1I3-217ENST00000502985 DBF4Q9UBU7 674 aaPredicted RBP13.4□□□□□ -0.26
NR1I3-217ENST00000502985 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
NR1I3-217ENST00000502985 AFDNP55196 1824 aaKnown RBP13.4□□□□□ -0.26
NR1I3-217ENST00000502985 LRP5O75197 1615 aa13.39□□□□□ -0.27
NR1I3-217ENST00000502985 A0A087WZG4 1122 aa13.39□□□□□ -0.27
NR1I3-217ENST00000502985 ZPR1O75312 459 aa13.39□□□□□ -0.27
NR1I3-217ENST00000502985 TTLL7Q6ZT98 887 aa13.39□□□□□ -0.27
NR1I3-217ENST00000502985 LRP10Q7Z4F1 713 aa13.39□□□□□ -0.27
NR1I3-217ENST00000502985 GYS1P13807 737 aa13.38□□□□□ -0.27
NR1I3-217ENST00000502985 KIF6Q6ZMV9 814 aa13.38□□□□□ -0.27
NR1I3-217ENST00000502985 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
NR1I3-217ENST00000502985 STK31Q9BXU1 1019 aa13.38□□□□□ -0.27
NR1I3-217ENST00000502985 MTFR1LQ9H019 292 aa13.38□□□□□ -0.27
NR1I3-217ENST00000502985 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
NR1I3-217ENST00000502985 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
NR1I3-217ENST00000502985 COPS6Q7L5N1 327 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms