RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CEMIPQ8WUJ3 1361 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 LMTK3Q96Q04 1460 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 MCM4P33991 863 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 PDE1AP54750 535 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 STAP2Q9UGK3 403 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 ABCC6O95255 1503 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 CACNA1FO60840 1977 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 HSP90B1P14625 803 aaKnown RBP8.97□□□□□ -0.97
PDGFC-203ENST00000502773 ZKSCAN1P17029 563 aaPredicted RBP8.97□□□□□ -0.97
PDGFC-203ENST00000502773 FMNL2Q96PY5 1086 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 DDX21Q9NR30 783 aaKnown RBP eCLIP8.97□□□□□ -0.97
PDGFC-203ENST00000502773 DIAPH3Q9NSV4 1193 aa8.97□□□□□ -0.97
PDGFC-203ENST00000502773 SSH3Q8TE77 659 aa8.96□□□□□ -0.97
PDGFC-203ENST00000502773 MST1RQ04912 1400 aa8.96□□□□□ -0.97
PDGFC-203ENST00000502773 SNRPA1P09661 255 aaKnown RBP8.96□□□□□ -0.98
PDGFC-203ENST00000502773 PSMA5P28066 241 aa8.96□□□□□ -0.98
PDGFC-203ENST00000502773 ATP10DQ9P241 1426 aa8.96□□□□□ -0.98
PDGFC-203ENST00000502773 PHF14O94880 888 aa8.96□□□□□ -0.98
PDGFC-203ENST00000502773 CHD2O14647 1828 aaKnown RBP8.96□□□□□ -0.98
PDGFC-203ENST00000502773 RGPD1P0DJD0 1748 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 SRGAP3O43295 1099 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 NBPF6Q5VWK0 638 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 RILPL2Q969X0 211 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 NBPF4Q96M43 638 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 CABP4P57796 275 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 ZSCAN31Q96LW9 406 aaPredicted RBP8.95□□□□□ -0.98
PDGFC-203ENST00000502773 KIF3AQ9Y496 699 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 APBB1O00213 710 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 SKAP1Q86WV1 359 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 MIS18AQ9NYP9 233 aa8.95□□□□□ -0.98
PDGFC-203ENST00000502773 SDSP20132 328 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 MRE11P49959 708 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 FAM13BQ9NYF5 915 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-203ENST00000502773 LRRFIP2Q9Y608 721 aaKnown RBP8.94□□□□□ -0.98
PDGFC-203ENST00000502773 TNNT3P45378 269 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-203ENST00000502773 KCNJ4P48050 445 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 ANKRD1Q15327 319 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 USP26Q9BXU7 913 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 C1orf167Q5SNV9 1468 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 SEC24BO95487 1268 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 MBD3O95983 291 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 INTS4Q96HW7 963 aaKnown RBP8.94□□□□□ -0.98
PDGFC-203ENST00000502773 ADAMTSL3P82987 1691 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 RAD50Q92878 1312 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 FRAT2O75474 233 aaPredicted RBP8.94□□□□□ -0.98
PDGFC-203ENST00000502773 MTX1Q13505 466 aa8.94□□□□□ -0.98
PDGFC-203ENST00000502773 NWD1Q149M9 1564 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 EVA1CP58658 441 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 SIRT2Q8IXJ6 389 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 RHPN1Q8TCX5 695 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 EVI5LQ96CN4 794 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 ANO2Q9NQ90 1003 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 F6X3S4 739 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 FAM43AQ8N2R8 423 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 PIK3C2AO00443 1686 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 PI4KAP2A4QPH2 592 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 TRAK2O60296 914 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 KRT32Q14532 448 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 PPP1R42Q7Z4L9 355 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 PI4KAP1Q8N8J0 262 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 SLC52A2Q9HAB3 445 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 ECHDC1Q9NTX5 307 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 SLIT3O75094 1523 aa8.93□□□□□ -0.98
PDGFC-203ENST00000502773 GIGYF1O75420 1035 aaPredicted RBP8.92□□□□□ -0.98
PDGFC-203ENST00000502773 ERVV-2B6SEH9 535 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 MPRIPQ6WCQ1 1025 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 ESYT1Q9BSJ8 1104 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 ERBB3P21860 1342 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 PCDH11XQ9BZA7 1347 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 PCDH11YQ9BZA8 1340 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 GRM8O00222 908 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 LETM1O95202 739 aaPredicted RBP8.92□□□□□ -0.98
PDGFC-203ENST00000502773 HMGB2P26583 209 aaKnown RBP8.92□□□□□ -0.98
PDGFC-203ENST00000502773 POLA2Q14181 598 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 CHPF2Q9P2E5 772 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 DLG5Q8TDM6 1919 aa8.92□□□□□ -0.98
PDGFC-203ENST00000502773 G2E3Q7L622 706 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 USP44Q9H0E7 712 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 PRDM11Q9NQV5 511 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 PDCP20941 246 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 BEND3Q5T5X7 828 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 NECTIN2Q92692 538 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 ORAI2Q96SN7 254 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-203ENST00000502773 EXOC6BQ9Y2D4 811 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 MAP3K2Q9Y2U5 619 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 PHRF1Q9P1Y6 1649 aaKnown RBP8.91□□□□□ -0.98
PDGFC-203ENST00000502773 PATL2C9JE40 543 aaKnown RBP8.91□□□□□ -0.98
PDGFC-203ENST00000502773 HSP90AB3PQ58FF7 597 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 ZNF790Q6PG37 636 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 ANTXR1Q9H6X2 564 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 ZHX1Q9UKY1 873 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-203ENST00000502773 TNS3Q68CZ2 1445 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 CPDO75976 1380 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 TMEM94Q12767 1356 aa8.91□□□□□ -0.98
PDGFC-203ENST00000502773 USHBP1Q8N6Y0 703 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms