RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 ZPR1O75312 459 aa17.04■□□□□ 0.32
RACK1-202ENST00000502548 MMP10P09238 476 aa17.04■□□□□ 0.32
RACK1-202ENST00000502548 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
RACK1-202ENST00000502548 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
RACK1-202ENST00000502548 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
RACK1-202ENST00000502548 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
RACK1-202ENST00000502548 A1BGP04217 495 aa17.03■□□□□ 0.32
RACK1-202ENST00000502548 SRP68Q9UHB9 627 aaKnown RBP17.03■□□□□ 0.32
RACK1-202ENST00000502548 NARFQ9UHQ1 456 aa17.03■□□□□ 0.32
RACK1-202ENST00000502548 A0A087WZG4 1122 aa17.02■□□□□ 0.32
RACK1-202ENST00000502548 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
RACK1-202ENST00000502548 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
RACK1-202ENST00000502548 NPM2Q86SE8 214 aaKnown RBP17.02■□□□□ 0.32
RACK1-202ENST00000502548 TRIM35Q9UPQ4 493 aa17.02■□□□□ 0.32
RACK1-202ENST00000502548 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
RACK1-202ENST00000502548 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
RACK1-202ENST00000502548 APAF1O14727 1248 aa17.01■□□□□ 0.31
RACK1-202ENST00000502548 FKBP8Q14318 412 aa17.01■□□□□ 0.31
RACK1-202ENST00000502548 MRS2Q9HD23 443 aa17.01■□□□□ 0.31
RACK1-202ENST00000502548 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
RACK1-202ENST00000502548 TAF1LQ8IZX4 1826 aa17■□□□□ 0.31
RACK1-202ENST00000502548 GIGYF1O75420 1035 aaPredicted RBP17■□□□□ 0.31
RACK1-202ENST00000502548 USPL1Q5W0Q7 1092 aa17■□□□□ 0.31
RACK1-202ENST00000502548 PARP3Q9Y6F1 533 aa17■□□□□ 0.31
RACK1-202ENST00000502548 TM4SF1P30408 202 aa16.99■□□□□ 0.31
RACK1-202ENST00000502548 NLGN2Q8NFZ4 835 aa16.99■□□□□ 0.31
RACK1-202ENST00000502548 COL15A1P39059 1388 aa16.99■□□□□ 0.31
RACK1-202ENST00000502548 CHL1O00533 1208 aa16.98■□□□□ 0.31
RACK1-202ENST00000502548 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
RACK1-202ENST00000502548 BCL2L12Q9HB09 334 aa16.97■□□□□ 0.31
RACK1-202ENST00000502548 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
RACK1-202ENST00000502548 GPR162Q16538 588 aa16.96■□□□□ 0.31
RACK1-202ENST00000502548 UBR3Q6ZT12 1888 aa16.96■□□□□ 0.31
RACK1-202ENST00000502548 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.3
RACK1-202ENST00000502548 NBPF26B4DH59 902 aa16.95■□□□□ 0.3
RACK1-202ENST00000502548 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
RACK1-202ENST00000502548 TGFB2P61812 414 aa16.95■□□□□ 0.3
RACK1-202ENST00000502548 NFIXQ14938 502 aa16.95■□□□□ 0.3
RACK1-202ENST00000502548 NBPF10Q6P3W6 841 aaKnown RBP16.95■□□□□ 0.3
RACK1-202ENST00000502548 NBPF15Q8N660 670 aa16.95■□□□□ 0.3
RACK1-202ENST00000502548 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
RACK1-202ENST00000502548 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
RACK1-202ENST00000502548 CICQ96RK0 1608 aaPredicted RBP16.95■□□□□ 0.3
RACK1-202ENST00000502548 TJP1Q07157 1748 aa16.94■□□□□ 0.3
RACK1-202ENST00000502548 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
RACK1-202ENST00000502548 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
RACK1-202ENST00000502548 DDR1Q08345 913 aa16.94■□□□□ 0.3
RACK1-202ENST00000502548 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
RACK1-202ENST00000502548 COL5A3P25940 1745 aaPredicted RBP16.93■□□□□ 0.3
RACK1-202ENST00000502548 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
RACK1-202ENST00000502548 CAMTA2O94983 1202 aa16.93■□□□□ 0.3
RACK1-202ENST00000502548 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
RACK1-202ENST00000502548 CLEC4GQ6UXB4 293 aa16.92■□□□□ 0.3
RACK1-202ENST00000502548 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
RACK1-202ENST00000502548 COL24A1Q17RW2 1714 aa16.92■□□□□ 0.3
RACK1-202ENST00000502548 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
RACK1-202ENST00000502548 SERPINB2P05120 415 aa16.91■□□□□ 0.3
RACK1-202ENST00000502548 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
RACK1-202ENST00000502548 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
RACK1-202ENST00000502548 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
RACK1-202ENST00000502548 UBR2Q8IWV8 1755 aa16.91■□□□□ 0.3
RACK1-202ENST00000502548 SIPA1L3O60292 1781 aaPredicted RBP16.9■□□□□ 0.3
RACK1-202ENST00000502548 RGL2O15211 777 aa16.9■□□□□ 0.3
RACK1-202ENST00000502548 EIF2S2P20042 333 aaKnown RBP16.9■□□□□ 0.3
RACK1-202ENST00000502548 GNAI1P63096 354 aa16.9■□□□□ 0.3
RACK1-202ENST00000502548 TBC1D9BQ66K14 1250 aa16.9■□□□□ 0.3
RACK1-202ENST00000502548 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
RACK1-202ENST00000502548 ERBB4Q15303 1308 aa16.9■□□□□ 0.3
RACK1-202ENST00000502548 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
RACK1-202ENST00000502548 NGEFQ8N5V2 710 aa16.89■□□□□ 0.29
RACK1-202ENST00000502548 SETDB2Q96T68 719 aa16.89■□□□□ 0.29
RACK1-202ENST00000502548 ZNF652Q9Y2D9 606 aa16.89■□□□□ 0.29
RACK1-202ENST00000502548 MYL6BP14649 208 aa16.88■□□□□ 0.29
RACK1-202ENST00000502548 YBX3P16989 372 aaKnown RBP eCLIP16.88■□□□□ 0.299e-44■□□□□ 10.3
RACK1-202ENST00000502548 FAM9BQ8IZU0 186 aa16.88■□□□□ 0.29
RACK1-202ENST00000502548 MBIPQ9NS73 344 aa16.88■□□□□ 0.29
RACK1-202ENST00000502548 ERVV-1B6SEH8 477 aa16.87■□□□□ 0.29
RACK1-202ENST00000502548 HOXB7P09629 217 aa16.87■□□□□ 0.29
RACK1-202ENST00000502548 DPEP1P16444 411 aa16.87■□□□□ 0.29
RACK1-202ENST00000502548 KRT24Q2M2I5 525 aa16.87■□□□□ 0.29
RACK1-202ENST00000502548 WWC1Q8IX03 1113 aa16.87■□□□□ 0.29
RACK1-202ENST00000502548 PDIA6Q15084 440 aa16.86■□□□□ 0.29
RACK1-202ENST00000502548 C10orf71Q711Q0 1435 aa16.86■□□□□ 0.29
RACK1-202ENST00000502548 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
RACK1-202ENST00000502548 KCNA3P22001 575 aa16.85■□□□□ 0.29
RACK1-202ENST00000502548 YY1P25490 414 aa16.85■□□□□ 0.29
RACK1-202ENST00000502548 DUSP27Q5VZP5 1158 aa16.85■□□□□ 0.29
RACK1-202ENST00000502548 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
RACK1-202ENST00000502548 HLFQ16534 295 aa16.84■□□□□ 0.29
RACK1-202ENST00000502548 TTLL7Q6ZT98 887 aa16.84■□□□□ 0.29
RACK1-202ENST00000502548 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
RACK1-202ENST00000502548 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
RACK1-202ENST00000502548 PIM2Q9P1W9 311 aa16.84■□□□□ 0.29
RACK1-202ENST00000502548 WWC3Q9ULE0 1092 aa16.84■□□□□ 0.29
RACK1-202ENST00000502548 VIRMAQ69YN4 1812 aaKnown RBP16.83■□□□□ 0.28
RACK1-202ENST00000502548 MAP3K15Q6ZN16 1313 aa16.83■□□□□ 0.28
RACK1-202ENST00000502548 CARMIL3Q8ND23 1372 aa16.83■□□□□ 0.28
RACK1-202ENST00000502548 BRIP1Q9BX63 1249 aa16.83■□□□□ 0.28
RACK1-202ENST00000502548 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
RACK1-202ENST00000502548 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.284e-11■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms