RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 TUBGCP6Q96RT7 1819 aa16.02■□□□□ 0.16
YIPF3-209ENST00000500090 TJP1Q07157 1748 aa16.02■□□□□ 0.15
YIPF3-209ENST00000500090 LRP5O75197 1615 aa16.01■□□□□ 0.15
YIPF3-209ENST00000500090 CHL1O00533 1208 aa16.01■□□□□ 0.15
YIPF3-209ENST00000500090 EIF4A1P60842 406 aaKnown RBP16.01■□□□□ 0.15
YIPF3-209ENST00000500090 AMIGO3Q86WK7 504 aa16.01■□□□□ 0.15
YIPF3-209ENST00000500090 NGEFQ8N5V2 710 aa16.01■□□□□ 0.15
YIPF3-209ENST00000500090 RFC4P35249 363 aa16■□□□□ 0.15
YIPF3-209ENST00000500090 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
YIPF3-209ENST00000500090 CFAP44Q96MT7 982 aa16■□□□□ 0.15
YIPF3-209ENST00000500090 GIGYF1O75420 1035 aaPredicted RBP15.99■□□□□ 0.15
YIPF3-209ENST00000500090 POLD1P28340 1107 aa15.99■□□□□ 0.15
YIPF3-209ENST00000500090 PTGER2P43116 358 aa15.99■□□□□ 0.15
YIPF3-209ENST00000500090 USP16Q9Y5T5 823 aa15.99■□□□□ 0.15
YIPF3-209ENST00000500090 SOS1Q07889 1333 aaPredicted RBP15.98■□□□□ 0.15
YIPF3-209ENST00000500090 KDM3BQ7LBC6 1761 aa15.98■□□□□ 0.15
YIPF3-209ENST00000500090 SMIM5Q71RC9 77 aa15.98■□□□□ 0.15
YIPF3-209ENST00000500090 SGIP1Q9BQI5 828 aa15.98■□□□□ 0.15
YIPF3-209ENST00000500090 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
YIPF3-209ENST00000500090 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
YIPF3-209ENST00000500090 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
YIPF3-209ENST00000500090 A0A087WZG4 1122 aa15.97■□□□□ 0.15
YIPF3-209ENST00000500090 ZNF853P0CG23 659 aa15.97■□□□□ 0.15
YIPF3-209ENST00000500090 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
YIPF3-209ENST00000500090 IL6STP40189 918 aaPredicted RBP15.97■□□□□ 0.15
YIPF3-209ENST00000500090 GNAI1P63096 354 aa15.97■□□□□ 0.15
YIPF3-209ENST00000500090 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
YIPF3-209ENST00000500090 WWC1Q8IX03 1113 aa15.97■□□□□ 0.15
YIPF3-209ENST00000500090 PPP1R1BQ9UD71 204 aaPredicted RBP15.97■□□□□ 0.15
YIPF3-209ENST00000500090 A1BGP04217 495 aa15.96■□□□□ 0.15
YIPF3-209ENST00000500090 EIF5P55010 431 aaKnown RBP15.96■□□□□ 0.15
YIPF3-209ENST00000500090 NLGN1Q8N2Q7 840 aa15.96■□□□□ 0.15
YIPF3-209ENST00000500090 PRAMEF22A3QJZ6 481 aa15.95■□□□□ 0.14
YIPF3-209ENST00000500090 ZPR1O75312 459 aa15.95■□□□□ 0.14
YIPF3-209ENST00000500090 MIER1Q8N108 512 aa15.95■□□□□ 0.14
YIPF3-209ENST00000500090 IL16Q14005 1332 aa15.94■□□□□ 0.14
YIPF3-209ENST00000500090 WDR63Q8IWG1 891 aa15.94■□□□□ 0.14
YIPF3-209ENST00000500090 ARXQ96QS3 562 aa15.94■□□□□ 0.14
YIPF3-209ENST00000500090 COL15A1P39059 1388 aa15.94■□□□□ 0.14
YIPF3-209ENST00000500090 COL24A1Q17RW2 1714 aa15.94■□□□□ 0.14
YIPF3-209ENST00000500090 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
YIPF3-209ENST00000500090 GYS1P13807 737 aa15.93■□□□□ 0.14
YIPF3-209ENST00000500090 MSL1Q68DK7 614 aa15.93■□□□□ 0.14
YIPF3-209ENST00000500090 MBIPQ9NS73 344 aa15.93■□□□□ 0.14
YIPF3-209ENST00000500090 NARFQ9UHQ1 456 aa15.93■□□□□ 0.14
YIPF3-209ENST00000500090 ERBB4Q15303 1308 aa15.93■□□□□ 0.14
YIPF3-209ENST00000500090 HOXB7P09629 217 aa15.92■□□□□ 0.14
YIPF3-209ENST00000500090 CHMP4AQ9BY43 222 aa15.91■□□□□ 0.14
YIPF3-209ENST00000500090 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
YIPF3-209ENST00000500090 SALL2Q9Y467 1007 aaPredicted RBP15.91■□□□□ 0.14
YIPF3-209ENST00000500090 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
YIPF3-209ENST00000500090 NBPF26B4DH59 902 aa15.9■□□□□ 0.14
YIPF3-209ENST00000500090 NBPF10Q6P3W6 841 aaKnown RBP15.9■□□□□ 0.14
YIPF3-209ENST00000500090 NBPF15Q8N660 670 aa15.9■□□□□ 0.14
YIPF3-209ENST00000500090 SRP68Q9UHB9 627 aaKnown RBP15.9■□□□□ 0.14
YIPF3-209ENST00000500090 C4AP0C0L4 1744 aa15.89■□□□□ 0.13
YIPF3-209ENST00000500090 MMP10P09238 476 aa15.89■□□□□ 0.13
YIPF3-209ENST00000500090 EIF2S2P20042 333 aaKnown RBP15.89■□□□□ 0.13
YIPF3-209ENST00000500090 DUSP27Q5VZP5 1158 aa15.89■□□□□ 0.13
YIPF3-209ENST00000500090 USPL1Q5W0Q7 1092 aa15.89■□□□□ 0.13
YIPF3-209ENST00000500090 LAMB4A4D0S4 1761 aa15.89■□□□□ 0.13
YIPF3-209ENST00000500090 RGL2O15211 777 aa15.88■□□□□ 0.13
YIPF3-209ENST00000500090 FKBP8Q14318 412 aa15.88■□□□□ 0.13
YIPF3-209ENST00000500090 DZIP3Q86Y13 1208 aaKnown RBP15.88■□□□□ 0.13
YIPF3-209ENST00000500090 TBC1D2BQ9UPU7 963 aa15.88■□□□□ 0.13
YIPF3-209ENST00000500090 PIP4K2AP48426 406 aaPredicted RBP15.87■□□□□ 0.13
YIPF3-209ENST00000500090 KRT24Q2M2I5 525 aa15.87■□□□□ 0.13
YIPF3-209ENST00000500090 CLEC4GQ6UXB4 293 aa15.87■□□□□ 0.13
YIPF3-209ENST00000500090 SYT17Q9BSW7 474 aa15.87■□□□□ 0.13
YIPF3-209ENST00000500090 FHDC1Q9C0D6 1143 aaPredicted RBP15.87■□□□□ 0.13
YIPF3-209ENST00000500090 PARP3Q9Y6F1 533 aa15.87■□□□□ 0.13
YIPF3-209ENST00000500090 CAMTA2O94983 1202 aa15.86■□□□□ 0.13
YIPF3-209ENST00000500090 TM4SF1P30408 202 aa15.86■□□□□ 0.13
YIPF3-209ENST00000500090 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
YIPF3-209ENST00000500090 ZNF652Q9Y2D9 606 aa15.86■□□□□ 0.13
YIPF3-209ENST00000500090 CD2APQ9Y5K6 639 aa15.86■□□□□ 0.13
YIPF3-209ENST00000500090 MYL6BP14649 208 aa15.85■□□□□ 0.13
YIPF3-209ENST00000500090 PDIA6Q15084 440 aa15.85■□□□□ 0.13
YIPF3-209ENST00000500090 HDGFL1Q5TGJ6 251 aa15.85■□□□□ 0.13
YIPF3-209ENST00000500090 MYH16Q9H6N6 1097 aa15.85■□□□□ 0.13
YIPF3-209ENST00000500090 DDX21Q9NR30 783 aaKnown RBP eCLIP15.85■□□□□ 0.13
YIPF3-209ENST00000500090 ZNF521Q96K83 1311 aa15.85■□□□□ 0.13
YIPF3-209ENST00000500090 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
YIPF3-209ENST00000500090 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
YIPF3-209ENST00000500090 NFIXQ14938 502 aa15.84■□□□□ 0.13
YIPF3-209ENST00000500090 KIF6Q6ZMV9 814 aa15.84■□□□□ 0.13
YIPF3-209ENST00000500090 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
YIPF3-209ENST00000500090 TSR2Q969E8 191 aaKnown RBP15.84■□□□□ 0.13
YIPF3-209ENST00000500090 DBF4Q9UBU7 674 aaPredicted RBP15.84■□□□□ 0.13
YIPF3-209ENST00000500090 NECTIN2Q92692 538 aa15.83■□□□□ 0.12
YIPF3-209ENST00000500090 POLRMTO00411 1230 aaKnown RBP15.82■□□□□ 0.12
YIPF3-209ENST00000500090 ELL2O00472 640 aaPredicted RBP15.82■□□□□ 0.12
YIPF3-209ENST00000500090 CCDC30Q5VVM6 783 aa15.82■□□□□ 0.12
YIPF3-209ENST00000500090 LRP10Q7Z4F1 713 aa15.82■□□□□ 0.12
YIPF3-209ENST00000500090 KLHL34Q8N239 644 aa15.82■□□□□ 0.12
YIPF3-209ENST00000500090 SETDB2Q96T68 719 aa15.82■□□□□ 0.12
YIPF3-209ENST00000500090 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
YIPF3-209ENST00000500090 MAP3K15Q6ZN16 1313 aa15.82■□□□□ 0.12
YIPF3-209ENST00000500090 FANCIQ9NVI1 1328 aa15.82■□□□□ 0.12
YIPF3-209ENST00000500090 DDR1Q08345 913 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms