RNA–Protein interactions for RNA: ENST00000497423.1

LCLAT1-212, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-212ENST00000497423 USP42Q9H9J4 1324 aaKnown RBP18.27■□□□□ 0.52
LCLAT1-212ENST00000497423 SRP68Q9UHB9 627 aaKnown RBP18.26■□□□□ 0.51
LCLAT1-212ENST00000497423 UTRNP46939 3433 aa18.26■□□□□ 0.51
LCLAT1-212ENST00000497423 EIF5P55010 431 aaKnown RBP18.25■□□□□ 0.51
LCLAT1-212ENST00000497423 NARFQ9UHQ1 456 aa18.25■□□□□ 0.51
LCLAT1-212ENST00000497423 COL15A1P39059 1388 aa18.25■□□□□ 0.51
LCLAT1-212ENST00000497423 ZPR1O75312 459 aa18.24■□□□□ 0.51
LCLAT1-212ENST00000497423 YY1P25490 414 aa18.24■□□□□ 0.51
LCLAT1-212ENST00000497423 CANXP27824 592 aaKnown RBP18.24■□□□□ 0.51
LCLAT1-212ENST00000497423 FKBP8Q14318 412 aa18.24■□□□□ 0.51
LCLAT1-212ENST00000497423 GPR162Q16538 588 aa18.24■□□□□ 0.51
LCLAT1-212ENST00000497423 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
LCLAT1-212ENST00000497423 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
LCLAT1-212ENST00000497423 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 TM4SF1P30408 202 aa18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 RIPK4P57078 832 aa18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 KIF13BQ9NQT8 1826 aa18.23■□□□□ 0.51
LCLAT1-212ENST00000497423 USPL1Q5W0Q7 1092 aa18.22■□□□□ 0.51
LCLAT1-212ENST00000497423 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
LCLAT1-212ENST00000497423 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
LCLAT1-212ENST00000497423 A0A087WZG4 1122 aa18.21■□□□□ 0.51
LCLAT1-212ENST00000497423 A1BGP04217 495 aa18.21■□□□□ 0.51
LCLAT1-212ENST00000497423 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
LCLAT1-212ENST00000497423 CHD4Q14839 1912 aa18.21■□□□□ 0.51
LCLAT1-212ENST00000497423 KDM3BQ7LBC6 1761 aa18.2■□□□□ 0.5
LCLAT1-212ENST00000497423 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
LCLAT1-212ENST00000497423 TGFB2P61812 414 aa18.2■□□□□ 0.5
LCLAT1-212ENST00000497423 THUMPD2Q9BTF0 503 aaKnown RBP18.2■□□□□ 0.5
LCLAT1-212ENST00000497423 YBX3P16989 372 aaKnown RBP eCLIP18.19■□□□□ 0.5
LCLAT1-212ENST00000497423 DDR1Q08345 913 aa18.19■□□□□ 0.5
LCLAT1-212ENST00000497423 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
LCLAT1-212ENST00000497423 C10orf71Q711Q0 1435 aa18.19■□□□□ 0.5
LCLAT1-212ENST00000497423 CCDC146Q8IYE0 955 aa18.19■□□□□ 0.5
LCLAT1-212ENST00000497423 POLRMTO00411 1230 aaKnown RBP18.18■□□□□ 0.5
LCLAT1-212ENST00000497423 GRIN3BO60391 1043 aa18.18■□□□□ 0.5
LCLAT1-212ENST00000497423 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
LCLAT1-212ENST00000497423 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
LCLAT1-212ENST00000497423 GIGYF1O75420 1035 aaPredicted RBP18.17■□□□□ 0.5
LCLAT1-212ENST00000497423 NFIXQ14938 502 aa18.17■□□□□ 0.5
LCLAT1-212ENST00000497423 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
LCLAT1-212ENST00000497423 KIAA1551Q9HCM1 1747 aa18.17■□□□□ 0.5
LCLAT1-212ENST00000497423 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
LCLAT1-212ENST00000497423 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
LCLAT1-212ENST00000497423 TBC1D2BQ9UPU7 963 aa18.15■□□□□ 0.5
LCLAT1-212ENST00000497423 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
LCLAT1-212ENST00000497423 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.5
LCLAT1-212ENST00000497423 NBPF26B4DH59 902 aa18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 NBPF10Q6P3W6 841 aaKnown RBP18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 NBPF15Q8N660 670 aa18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 TSPYL4Q9UJ04 414 aa18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 ZNF330Q9Y3S2 320 aaPredicted RBP18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 NRXN2Q9P2S2 1712 aa18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 N4BP2Q86UW6 1770 aaPredicted RBP18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.49
LCLAT1-212ENST00000497423 CAMTA2O94983 1202 aa18.13■□□□□ 0.49
LCLAT1-212ENST00000497423 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
LCLAT1-212ENST00000497423 A0A0G2JLW4 131 aa18.12■□□□□ 0.49
LCLAT1-212ENST00000497423 SERPINB2P05120 415 aa18.12■□□□□ 0.49
LCLAT1-212ENST00000497423 DPEP1P16444 411 aa18.12■□□□□ 0.49
LCLAT1-212ENST00000497423 KCNA3P22001 575 aa18.12■□□□□ 0.49
LCLAT1-212ENST00000497423 PIP4K2AP48426 406 aaPredicted RBP18.12■□□□□ 0.49
LCLAT1-212ENST00000497423 CCDC184Q52MB2 194 aa18.12■□□□□ 0.49
LCLAT1-212ENST00000497423 DZIP3Q86Y13 1208 aaKnown RBP18.12■□□□□ 0.49
LCLAT1-212ENST00000497423 CHL1O00533 1208 aa18.11■□□□□ 0.49
LCLAT1-212ENST00000497423 RGL2O15211 777 aa18.11■□□□□ 0.49
LCLAT1-212ENST00000497423 ANP32CO43423 234 aa18.11■□□□□ 0.49
LCLAT1-212ENST00000497423 TBC1D9BQ66K14 1250 aa18.11■□□□□ 0.49
LCLAT1-212ENST00000497423 CLEC4GQ6UXB4 293 aa18.11■□□□□ 0.49
LCLAT1-212ENST00000497423 BRCA1P38398 1863 aaKnown RBP18.1■□□□□ 0.49
LCLAT1-212ENST00000497423 BCORQ6W2J9 1755 aa18.1■□□□□ 0.49
LCLAT1-212ENST00000497423 APAF1O14727 1248 aa18.09■□□□□ 0.49
LCLAT1-212ENST00000497423 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.48
LCLAT1-212ENST00000497423 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
LCLAT1-212ENST00000497423 SETDB2Q96T68 719 aa18.07■□□□□ 0.48
LCLAT1-212ENST00000497423 PIM2Q9P1W9 311 aa18.07■□□□□ 0.48
LCLAT1-212ENST00000497423 WWC3Q9ULE0 1092 aa18.07■□□□□ 0.48
LCLAT1-212ENST00000497423 CARMIL3Q8ND23 1372 aa18.06■□□□□ 0.48
LCLAT1-212ENST00000497423 CFAP44Q96MT7 982 aa18.06■□□□□ 0.48
LCLAT1-212ENST00000497423 BCS1LQ9Y276 419 aa18.06■□□□□ 0.48
LCLAT1-212ENST00000497423 ZNF652Q9Y2D9 606 aa18.06■□□□□ 0.48
LCLAT1-212ENST00000497423 ZNF784Q8NCA9 323 aaPredicted RBP18.05■□□□□ 0.48
LCLAT1-212ENST00000497423 ERVV-1B6SEH8 477 aa18.04■□□□□ 0.48
LCLAT1-212ENST00000497423 ZNF853P0CG23 659 aa18.04■□□□□ 0.48
LCLAT1-212ENST00000497423 CHRNA5P30532 468 aa18.04■□□□□ 0.48
LCLAT1-212ENST00000497423 PDIA6Q15084 440 aa18.04■□□□□ 0.48
LCLAT1-212ENST00000497423 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
LCLAT1-212ENST00000497423 ARFGEF1Q9Y6D6 1849 aa18.04■□□□□ 0.48
LCLAT1-212ENST00000497423 HLFQ16534 295 aa18.03■□□□□ 0.48
LCLAT1-212ENST00000497423 DALRD3Q5D0E6 543 aaKnown RBP18.03■□□□□ 0.48
LCLAT1-212ENST00000497423 PRR5LQ6MZQ0 368 aa18.03■□□□□ 0.48
LCLAT1-212ENST00000497423 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
LCLAT1-212ENST00000497423 BRIP1Q9BX63 1249 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms