RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
CHCHD3-206ENST00000496427 WWC3Q9ULE0 1092 aa9.82□□□□□ -0.84
CHCHD3-206ENST00000496427 USP47Q96K76 1375 aa9.82□□□□□ -0.84
CHCHD3-206ENST00000496427 BRCA1P38398 1863 aaKnown RBP9.81□□□□□ -0.84
CHCHD3-206ENST00000496427 AMPHP49418 695 aa9.81□□□□□ -0.84
CHCHD3-206ENST00000496427 RRS1Q15050 365 aaKnown RBP9.81□□□□□ -0.84
CHCHD3-206ENST00000496427 TERF2IPQ9NYB0 399 aa9.81□□□□□ -0.84
CHCHD3-206ENST00000496427 SMIM5Q71RC9 77 aa9.8□□□□□ -0.84
CHCHD3-206ENST00000496427 ZNF526Q8TF50 670 aaPredicted RBP9.8□□□□□ -0.84
CHCHD3-206ENST00000496427 COG3Q96JB2 828 aa9.8□□□□□ -0.84
CHCHD3-206ENST00000496427 VIRMAQ69YN4 1812 aaKnown RBP9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 C4AP0C0L4 1744 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 RTL1A6NKG5 1358 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 ADCY9O60503 1353 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 PALLDQ8WX93 1383 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 KIF3CO14782 793 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 NBPF6Q5VWK0 638 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 AMIGO3Q86WK7 504 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 NBPF4Q96M43 638 aa9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 COL5A3P25940 1745 aaPredicted RBP9.79□□□□□ -0.84
CHCHD3-206ENST00000496427 CICQ96RK0 1608 aaPredicted RBP9.78□□□□□ -0.84
CHCHD3-206ENST00000496427 GRIN3BO60391 1043 aa9.78□□□□□ -0.84
CHCHD3-206ENST00000496427 SLC34A2O95436 690 aa9.78□□□□□ -0.84
CHCHD3-206ENST00000496427 KHSRPQ92945 711 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■■■□□ 15.3
CHCHD3-206ENST00000496427 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
CHCHD3-206ENST00000496427 SMG6Q86US8 1419 aaKnown RBP9.78□□□□□ -0.84
CHCHD3-206ENST00000496427 PHF14O94880 888 aa9.77□□□□□ -0.85
CHCHD3-206ENST00000496427 TESK2Q96S53 571 aa9.77□□□□□ -0.85
CHCHD3-206ENST00000496427 GGNBP2Q9H3C7 697 aa9.77□□□□□ -0.85
CHCHD3-206ENST00000496427 ARFGEF1Q9Y6D6 1849 aa9.77□□□□□ -0.85
CHCHD3-206ENST00000496427 TONSLQ96HA7 1378 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 WDR90Q96KV7 1748 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 ST20-MTHFSA0A0A6YYL1 179 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 C2orf72A6NCS6 295 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 TATP17735 454 aaPredicted RBP9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 MPRIPQ6WCQ1 1025 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 RAPGEF4Q8WZA2 1011 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 MFRPQ9BY79 579 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 IGSF1Q8N6C5 1336 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 PCDH11XQ9BZA7 1347 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 PCDH11YQ9BZA8 1340 aa9.76□□□□□ -0.85
CHCHD3-206ENST00000496427 MYH14Q7Z406 1995 aaKnown RBP9.75□□□□□ -0.85
CHCHD3-206ENST00000496427 CCDC88AQ3V6T2 1871 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 FYB1O15117 783 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 CYP27B1O15528 508 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 NUDT7P0C024 238 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 AK7Q96M32 723 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 CD2APQ9Y5K6 639 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 SBF1O95248 1867 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 INSRP06213 1382 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 FLT4P35916 1363 aa9.74□□□□□ -0.85
CHCHD3-206ENST00000496427 STK25O00506 426 aa9.73□□□□□ -0.85
CHCHD3-206ENST00000496427 PUS7Q96PZ0 661 aaKnown RBP9.73□□□□□ -0.85
CHCHD3-206ENST00000496427 CGNL1Q0VF96 1302 aa9.73□□□□□ -0.85
CHCHD3-206ENST00000496427 ZNF831Q5JPB2 1677 aa9.73□□□□□ -0.85
CHCHD3-206ENST00000496427 NCAPD2Q15021 1401 aa9.73□□□□□ -0.85
CHCHD3-206ENST00000496427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
CHCHD3-206ENST00000496427 HSPA6P17066 643 aa9.72□□□□□ -0.85
CHCHD3-206ENST00000496427 LINC00116Q8NCU8 138 aa9.72□□□□□ -0.85
CHCHD3-206ENST00000496427 PCDHGA4Q9Y5G9 962 aa9.72□□□□□ -0.85
CHCHD3-206ENST00000496427 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
CHCHD3-206ENST00000496427 TJP1Q07157 1748 aa9.72□□□□□ -0.85
CHCHD3-206ENST00000496427 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
CHCHD3-206ENST00000496427 FLAD1Q8NFF5 587 aa9.71□□□□□ -0.86
CHCHD3-206ENST00000496427 TMC2Q8TDI7 906 aa9.71□□□□□ -0.86
CHCHD3-206ENST00000496427 PIGBQ92521 554 aa9.71□□□□□ -0.86
CHCHD3-206ENST00000496427 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
CHCHD3-206ENST00000496427 NSD3Q9BZ95 1437 aa9.71□□□□□ -0.86
CHCHD3-206ENST00000496427 AFDNP55196 1824 aaKnown RBP9.7□□□□□ -0.86
CHCHD3-206ENST00000496427 HCSTQ9UBK5 93 aa9.7□□□□□ -0.86
CHCHD3-206ENST00000496427 CACNA1SQ13698 1873 aa9.7□□□□□ -0.86
CHCHD3-206ENST00000496427 LOC102724428A0A0B4J2F2 783 aa9.69□□□□□ -0.86
CHCHD3-206ENST00000496427 GNPATO15228 680 aa9.69□□□□□ -0.86
CHCHD3-206ENST00000496427 SIK1P57059 783 aa9.69□□□□□ -0.86
CHCHD3-206ENST00000496427 ITPK1Q13572 414 aa9.69□□□□□ -0.86
CHCHD3-206ENST00000496427 SMARCC1Q92922 1105 aaPredicted RBP9.69□□□□□ -0.86
CHCHD3-206ENST00000496427 TNRC6CQ9HCJ0 1690 aaKnown RBP9.69□□□□□ -0.86
CHCHD3-206ENST00000496427 SCN11AQ9UI33 1791 aa9.69□□□□□ -0.86
CHCHD3-206ENST00000496427 DLEC1Q9Y238 1755 aa9.68□□□□□ -0.86
CHCHD3-206ENST00000496427 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
CHCHD3-206ENST00000496427 C10orf71Q711Q0 1435 aa9.68□□□□□ -0.86
CHCHD3-206ENST00000496427 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
CHCHD3-206ENST00000496427 SSFA2P28290 1259 aa9.68□□□□□ -0.86
CHCHD3-206ENST00000496427 ASAP1Q9ULH1 1129 aa9.68□□□□□ -0.86
CHCHD3-206ENST00000496427 ADAMTS7Q9UKP4 1686 aa9.67□□□□□ -0.86
CHCHD3-206ENST00000496427 KDRP35968 1356 aa9.67□□□□□ -0.86
CHCHD3-206ENST00000496427 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
CHCHD3-206ENST00000496427 TMF1P82094 1093 aa9.67□□□□□ -0.86
CHCHD3-206ENST00000496427 POTEEQ6S8J3 1075 aa9.67□□□□□ -0.86
CHCHD3-206ENST00000496427 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
CHCHD3-206ENST00000496427 TMOD3Q9NYL9 352 aa9.67□□□□□ -0.86
CHCHD3-206ENST00000496427 ARHGAP33O14559 1287 aa9.66□□□□□ -0.86
CHCHD3-206ENST00000496427 MMP10P09238 476 aa9.66□□□□□ -0.86
CHCHD3-206ENST00000496427 ATP6V1AP38606 617 aa9.66□□□□□ -0.86
CHCHD3-206ENST00000496427 EYA1Q99502 592 aa9.66□□□□□ -0.86
CHCHD3-206ENST00000496427 PLA2G2EQ9NZK7 142 aa9.66□□□□□ -0.86
CHCHD3-206ENST00000496427 BCS1LQ9Y276 419 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms