RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	DCTN1	Q14203	1278 aa		21.01	■□□□□ 0.95
PRKCZ-222	ENST00000496325	CCDC184	Q52MB2	194 aa		21.01	■□□□□ 0.95
PRKCZ-222	ENST00000496325	MCM10	Q7L590	875 aa		21.01	■□□□□ 0.95
PRKCZ-222	ENST00000496325	TNS4	Q8IZW8	715 aa		21.01	■□□□□ 0.95
PRKCZ-222	ENST00000496325	NEFM	P07197	916 aa		21	■□□□□ 0.95
PRKCZ-222	ENST00000496325	TEF	Q10587	303 aa		21	■□□□□ 0.95
PRKCZ-222	ENST00000496325	RBM46	Q8TBY0	533 aa	Known RBP	21	■□□□□ 0.95
PRKCZ-222	ENST00000496325	GNPAT	O15228	680 aa		20.99	■□□□□ 0.95
PRKCZ-222	ENST00000496325	PNN	Q9H307	717 aa	Known RBP	20.99	■□□□□ 0.95
PRKCZ-222	ENST00000496325	HMGB2	P26583	209 aa	Known RBP	20.98	■□□□□ 0.95
PRKCZ-222	ENST00000496325	PRELP	P51888	382 aa		20.98	■□□□□ 0.95
PRKCZ-222	ENST00000496325	NFE2L2	Q16236	605 aa		20.98	■□□□□ 0.95
PRKCZ-222	ENST00000496325	CCDC146	Q8IYE0	955 aa		20.98	■□□□□ 0.95
PRKCZ-222	ENST00000496325	RTF1	Q92541	710 aa	Known RBP	20.98	■□□□□ 0.95
PRKCZ-222	ENST00000496325	ADAMTS8	Q9UP79	889 aa		20.98	■□□□□ 0.95
PRKCZ-222	ENST00000496325	MAPK8IP3	Q9UPT6	1336 aa		20.98	■□□□□ 0.95
PRKCZ-222	ENST00000496325	C10orf71	Q711Q0	1435 aa		20.97	■□□□□ 0.95
PRKCZ-222	ENST00000496325	HTATSF1	O43719	755 aa	Known RBP	20.97	■□□□□ 0.95
PRKCZ-222	ENST00000496325	DPEP1	P16444	411 aa		20.97	■□□□□ 0.95
PRKCZ-222	ENST00000496325	WDR43	Q15061	677 aa	Known RBP eCLIP	20.97	■□□□□ 0.95
PRKCZ-222	ENST00000496325	ARFGEF1	Q9Y6D6	1849 aa		20.97	■□□□□ 0.95
PRKCZ-222	ENST00000496325	C4A	P0C0L4	1744 aa		20.96	■□□□□ 0.95
PRKCZ-222	ENST00000496325	C9orf131	Q5VYM1	1079 aa		20.96	■□□□□ 0.95
PRKCZ-222	ENST00000496325	ANP32C	O43423	234 aa		20.95	■□□□□ 0.94
PRKCZ-222	ENST00000496325	KCNQ3	O43525	872 aa		20.95	■□□□□ 0.94
PRKCZ-222	ENST00000496325	TGFB2	P61812	414 aa		20.95	■□□□□ 0.94
PRKCZ-222	ENST00000496325	DNAJC10	Q8IXB1	793 aa		20.95	■□□□□ 0.94
PRKCZ-222	ENST00000496325	KDM3B	Q7LBC6	1761 aa		20.95	■□□□□ 0.94
PRKCZ-222	ENST00000496325	RC3H1	Q5TC82	1133 aa	Known RBP	20.94	■□□□□ 0.94
PRKCZ-222	ENST00000496325	ZNF790	Q6PG37	636 aa		20.94	■□□□□ 0.94
PRKCZ-222	ENST00000496325	SBF1	O95248	1867 aa		20.93	■□□□□ 0.94
PRKCZ-222	ENST00000496325	BTBD11	A6QL63	1104 aa		20.93	■□□□□ 0.94
PRKCZ-222	ENST00000496325	KCNA3	P22001	575 aa		20.93	■□□□□ 0.94
PRKCZ-222	ENST00000496325	TTC5	Q8N0Z6	440 aa		20.93	■□□□□ 0.94
PRKCZ-222	ENST00000496325	ZNF496	Q96IT1	587 aa	Predicted RBP	20.93	■□□□□ 0.94
PRKCZ-222	ENST00000496325	THUMPD2	Q9BTF0	503 aa	Known RBP	20.93	■□□□□ 0.94
PRKCZ-222	ENST00000496325	CNTNAP4	Q9C0A0	1308 aa		20.93	■□□□□ 0.94
PRKCZ-222	ENST00000496325	TMPO	P42166	694 aa	Known RBP	20.92	■□□□□ 0.94
PRKCZ-222	ENST00000496325	CRKL	P46109	303 aa	Known RBP	20.92	■□□□□ 0.94
PRKCZ-222	ENST00000496325	C16orf71	Q8IYS4	520 aa	Predicted RBP	20.92	■□□□□ 0.94
PRKCZ-222	ENST00000496325	RRAGC	Q9HB90	399 aa		20.92	■□□□□ 0.94
PRKCZ-222	ENST00000496325	RIPK4	P57078	832 aa		20.91	■□□□□ 0.94
PRKCZ-222	ENST00000496325	FSTL1	Q12841	308 aa		20.91	■□□□□ 0.94
PRKCZ-222	ENST00000496325	RUNDC1	Q96C34	613 aa		20.91	■□□□□ 0.94
PRKCZ-222	ENST00000496325	RRP7A	Q9Y3A4	280 aa	Known RBP	20.91	■□□□□ 0.94
PRKCZ-222	ENST00000496325	RPS6KA4	O75676	772 aa		20.9	■□□□□ 0.94
PRKCZ-222	ENST00000496325	CYP19A1	P11511	503 aa	Predicted RBP	20.9	■□□□□ 0.94
PRKCZ-222	ENST00000496325	INTS5	Q6P9B9	1019 aa	Known RBP	20.9	■□□□□ 0.94
PRKCZ-222	ENST00000496325	VSIG10	Q8N0Z9	540 aa		20.9	■□□□□ 0.94
PRKCZ-222	ENST00000496325	MIS18A	Q9NYP9	233 aa		20.9	■□□□□ 0.94
PRKCZ-222	ENST00000496325	RTCB	Q9Y3I0	505 aa	Known RBP	20.9	■□□□□ 0.94
PRKCZ-222	ENST00000496325	TNRC6C	Q9HCJ0	1690 aa	Known RBP	20.89	■□□□□ 0.94
PRKCZ-222	ENST00000496325	HEG1	Q9ULI3	1381 aa		20.89	■□□□□ 0.93
PRKCZ-222	ENST00000496325	TAF7	Q15545	349 aa	Predicted RBP	20.89	■□□□□ 0.93
PRKCZ-222	ENST00000496325	NEUROD2	Q15784	382 aa		20.89	■□□□□ 0.93
PRKCZ-222	ENST00000496325	TRAPPC3L	Q5T215	181 aa		20.87	■□□□□ 0.93
PRKCZ-222	ENST00000496325	ARHGEF1	Q92888	912 aa	Known RBP	20.87	■□□□□ 0.93
PRKCZ-222	ENST00000496325	FMNL2	Q96PY5	1086 aa		20.87	■□□□□ 0.93
PRKCZ-222	ENST00000496325	HSPA1A	P0DMV8	641 aa	Known RBP	20.86	■□□□□ 0.93
PRKCZ-222	ENST00000496325	HSPA1B	P0DMV9	641 aa	Known RBP	20.86	■□□□□ 0.93
PRKCZ-222	ENST00000496325	GYS1	P13807	737 aa		20.86	■□□□□ 0.93
PRKCZ-222	ENST00000496325	NLGN1	Q8N2Q7	840 aa		20.86	■□□□□ 0.93
PRKCZ-222	ENST00000496325	MRS2	Q9HD23	443 aa		20.86	■□□□□ 0.93
PRKCZ-222	ENST00000496325	CCDC87	Q9NVE4	849 aa		20.86	■□□□□ 0.93
PRKCZ-222	ENST00000496325	RNF181	Q9P0P0	153 aa		20.86	■□□□□ 0.93
PRKCZ-222	ENST00000496325	PRAMEF22	A3QJZ6	481 aa		20.85	■□□□□ 0.93
PRKCZ-222	ENST00000496325	PNISR	Q8TF01	805 aa	Known RBP	20.84	■□□□□ 0.93
PRKCZ-222	ENST00000496325	TRIM35	Q9UPQ4	493 aa		20.84	■□□□□ 0.93
PRKCZ-222	ENST00000496325	ZBTB1	Q9Y2K1	713 aa		20.84	■□□□□ 0.93
PRKCZ-222	ENST00000496325	LAMB4	A4D0S4	1761 aa		20.84	■□□□□ 0.93
PRKCZ-222	ENST00000496325	KDM2B	Q8NHM5	1336 aa		20.83	■□□□□ 0.93
PRKCZ-222	ENST00000496325	APAF1	O14727	1248 aa		20.83	■□□□□ 0.93
PRKCZ-222	ENST00000496325	ADRA2B	P18089	450 aa		20.83	■□□□□ 0.93
PRKCZ-222	ENST00000496325	SOS1	Q07889	1333 aa	Predicted RBP	20.82	■□□□□ 0.92
PRKCZ-222	ENST00000496325	RFC4	P35249	363 aa		20.82	■□□□□ 0.92
PRKCZ-222	ENST00000496325	USP16	Q9Y5T5	823 aa		20.82	■□□□□ 0.92
PRKCZ-222	ENST00000496325	PARP3	Q9Y6F1	533 aa		20.82	■□□□□ 0.92
PRKCZ-222	ENST00000496325	STARD3NL	O95772	234 aa		20.81	■□□□□ 0.92
PRKCZ-222	ENST00000496325	CANX	P27824	592 aa	Known RBP	20.81	■□□□□ 0.92
PRKCZ-222	ENST00000496325	CHRNA5	P30532	468 aa		20.81	■□□□□ 0.92
PRKCZ-222	ENST00000496325	LMOD3	Q0VAK6	560 aa		20.81	■□□□□ 0.92
PRKCZ-222	ENST00000496325	SMC1B	Q8NDV3	1235 aa		20.81	■□□□□ 0.92
PRKCZ-222	ENST00000496325	TEX13A	Q9BXU3	409 aa	Predicted RBP	20.81	■□□□□ 0.92
PRKCZ-222	ENST00000496325	PIM2	Q9P1W9	311 aa		20.81	■□□□□ 0.92
PRKCZ-222	ENST00000496325	SRP68	Q9UHB9	627 aa	Known RBP	20.81	■□□□□ 0.92
PRKCZ-222	ENST00000496325	A1BG	P04217	495 aa		20.8	■□□□□ 0.92
PRKCZ-222	ENST00000496325	SNRPA1	P09661	255 aa	Known RBP	20.79	■□□□□ 0.92
PRKCZ-222	ENST00000496325	RASSF7	Q02833	373 aa		20.79	■□□□□ 0.92
PRKCZ-222	ENST00000496325	DDR1	Q08345	913 aa		20.79	■□□□□ 0.92
PRKCZ-222	ENST00000496325	DALRD3	Q5D0E6	543 aa	Known RBP	20.79	■□□□□ 0.92
PRKCZ-222	ENST00000496325	CCDC88A	Q3V6T2	1871 aa		20.79	■□□□□ 0.92
PRKCZ-222	ENST00000496325	COL15A1	P39059	1388 aa		20.78	■□□□□ 0.92
PRKCZ-222	ENST00000496325	EIF4A1	P60842	406 aa	Known RBP	20.78	■□□□□ 0.92
PRKCZ-222	ENST00000496325	AFDN	P55196	1824 aa	Known RBP	20.77	■□□□□ 0.92
PRKCZ-222	ENST00000496325	PIP4K2A	P48426	406 aa	Predicted RBP	20.77	■□□□□ 0.92
PRKCZ-222	ENST00000496325	EIF5	P55010	431 aa	Known RBP	20.77	■□□□□ 0.92
PRKCZ-222	ENST00000496325	TSPYL4	Q9UJ04	414 aa		20.77	■□□□□ 0.92
PRKCZ-222	ENST00000496325	USP42	Q9H9J4	1324 aa	Known RBP	20.77	■□□□□ 0.91
PRKCZ-222	ENST00000496325	FKBP8	Q14318	412 aa		20.76	■□□□□ 0.91
PRKCZ-222	ENST00000496325	BCOR	Q6W2J9	1755 aa		20.74	■□□□□ 0.91

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms