RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 N4BP2Q86UW6 1770 aaPredicted RBP15.66■□□□□ 0.1
APTX-233ENST00000496030 PALLDQ8WX93 1383 aa15.65■□□□□ 0.1
APTX-233ENST00000496030 PRELPP51888 382 aa15.65■□□□□ 0.1
APTX-233ENST00000496030 TEFQ10587 303 aa15.65■□□□□ 0.1
APTX-233ENST00000496030 SLC39A6Q13433 755 aa15.65■□□□□ 0.1
APTX-233ENST00000496030 SMARCC1Q92922 1105 aaPredicted RBP15.65■□□□□ 0.1
APTX-233ENST00000496030 PHF14O94880 888 aa15.64■□□□□ 0.09
APTX-233ENST00000496030 TAF7Q15545 349 aaPredicted RBP15.64■□□□□ 0.09
APTX-233ENST00000496030 KIF13BQ9NQT8 1826 aa15.64■□□□□ 0.09
APTX-233ENST00000496030 KCNQ3O43525 872 aa15.63■□□□□ 0.09
APTX-233ENST00000496030 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
APTX-233ENST00000496030 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
APTX-233ENST00000496030 PXDNLA1KZ92 1463 aa15.63■□□□□ 0.09
APTX-233ENST00000496030 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
APTX-233ENST00000496030 SIK1P57059 783 aa15.62■□□□□ 0.09
APTX-233ENST00000496030 MIS18AQ9NYP9 233 aa15.62■□□□□ 0.09
APTX-233ENST00000496030 KCPQ6ZWJ8 1503 aa15.62■□□□□ 0.09
APTX-233ENST00000496030 UBR2Q8IWV8 1755 aa15.62■□□□□ 0.09
APTX-233ENST00000496030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.61■□□□□ 0.09
APTX-233ENST00000496030 BTBD11A6QL63 1104 aa15.61■□□□□ 0.09
APTX-233ENST00000496030 ITPK1Q13572 414 aa15.61■□□□□ 0.09
APTX-233ENST00000496030 CCDC27Q2M243 656 aa15.61■□□□□ 0.09
APTX-233ENST00000496030 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
APTX-233ENST00000496030 RBM46Q8TBY0 533 aaKnown RBP15.61■□□□□ 0.09
APTX-233ENST00000496030 AK7Q96M32 723 aa15.61■□□□□ 0.09
APTX-233ENST00000496030 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
APTX-233ENST00000496030 PTCD1O75127 700 aaKnown RBP15.6■□□□□ 0.09
APTX-233ENST00000496030 WWC1Q8IX03 1113 aa15.6■□□□□ 0.09
APTX-233ENST00000496030 ZNF496Q96IT1 587 aaPredicted RBP15.6■□□□□ 0.09
APTX-233ENST00000496030 BRCA1P38398 1863 aaKnown RBP15.59■□□□□ 0.09
APTX-233ENST00000496030 CHL1O00533 1208 aa15.59■□□□□ 0.09
APTX-233ENST00000496030 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
APTX-233ENST00000496030 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
APTX-233ENST00000496030 ZNF853P0CG23 659 aa15.58■□□□□ 0.08
APTX-233ENST00000496030 BCS1LQ9Y276 419 aa15.58■□□□□ 0.08
APTX-233ENST00000496030 A0A0G2JLW4 131 aa15.57■□□□□ 0.08
APTX-233ENST00000496030 ATP6V1AP38606 617 aa15.57■□□□□ 0.08
APTX-233ENST00000496030 ARHGAP27Q6ZUM4 889 aa15.57■□□□□ 0.08
APTX-233ENST00000496030 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
APTX-233ENST00000496030 BABAM1Q9NWV8 329 aa15.57■□□□□ 0.08
APTX-233ENST00000496030 SALL2Q9Y467 1007 aaPredicted RBP15.57■□□□□ 0.08
APTX-233ENST00000496030 HEG1Q9ULI3 1381 aa15.57■□□□□ 0.08
APTX-233ENST00000496030 TJP1Q07157 1748 aa15.57■□□□□ 0.08
APTX-233ENST00000496030 MMP10P09238 476 aa15.56■□□□□ 0.08
APTX-233ENST00000496030 SSFA2P28290 1259 aa15.56■□□□□ 0.08
APTX-233ENST00000496030 VSIG10Q8N0Z9 540 aa15.56■□□□□ 0.08
APTX-233ENST00000496030 NGEFQ8N5V2 710 aa15.56■□□□□ 0.08
APTX-233ENST00000496030 CFAP44Q96MT7 982 aa15.56■□□□□ 0.08
APTX-233ENST00000496030 ZNF521Q96K83 1311 aa15.56■□□□□ 0.08
APTX-233ENST00000496030 MYH14Q7Z406 1995 aaKnown RBP15.55■□□□□ 0.08
APTX-233ENST00000496030 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
APTX-233ENST00000496030 EIF4A1P60842 406 aaKnown RBP15.55■□□□□ 0.08
APTX-233ENST00000496030 FSTL1Q12841 308 aa15.55■□□□□ 0.08
APTX-233ENST00000496030 DNAJC10Q8IXB1 793 aa15.55■□□□□ 0.08
APTX-233ENST00000496030 TTC5Q8N0Z6 440 aa15.55■□□□□ 0.08
APTX-233ENST00000496030 C10orf71Q711Q0 1435 aa15.54■□□□□ 0.08
APTX-233ENST00000496030 PRAMEF22A3QJZ6 481 aa15.54■□□□□ 0.08
APTX-233ENST00000496030 C9orf131Q5VYM1 1079 aa15.54■□□□□ 0.08
APTX-233ENST00000496030 C16orf71Q8IYS4 520 aaPredicted RBP15.54■□□□□ 0.08
APTX-233ENST00000496030 FMNL2Q96PY5 1086 aa15.54■□□□□ 0.08
APTX-233ENST00000496030 IFT57Q9NWB7 429 aa15.54■□□□□ 0.08
APTX-233ENST00000496030 TSPYL4Q9UJ04 414 aa15.54■□□□□ 0.08
APTX-233ENST00000496030 ARFGEF1Q9Y6D6 1849 aa15.54■□□□□ 0.08
APTX-233ENST00000496030 IL16Q14005 1332 aa15.53■□□□□ 0.08
APTX-233ENST00000496030 CYP19A1P11511 503 aaPredicted RBP15.53■□□□□ 0.08
APTX-233ENST00000496030 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
APTX-233ENST00000496030 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
APTX-233ENST00000496030 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
APTX-233ENST00000496030 GNPATO15228 680 aa15.52■□□□□ 0.08
APTX-233ENST00000496030 DPEP1P16444 411 aa15.52■□□□□ 0.08
APTX-233ENST00000496030 HMGB2P26583 209 aaKnown RBP15.52■□□□□ 0.08
APTX-233ENST00000496030 TGFB2P61812 414 aa15.52■□□□□ 0.08
APTX-233ENST00000496030 GNAI1P63096 354 aa15.52■□□□□ 0.08
APTX-233ENST00000496030 CALD1Q05682 793 aaKnown RBP15.52■□□□□ 0.08
APTX-233ENST00000496030 RC3H1Q5TC82 1133 aaKnown RBP15.52■□□□□ 0.08
APTX-233ENST00000496030 INTS5Q6P9B9 1019 aaKnown RBP15.52■□□□□ 0.08
APTX-233ENST00000496030 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
APTX-233ENST00000496030 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
APTX-233ENST00000496030 TNRC6CQ9HCJ0 1690 aaKnown RBP15.51■□□□□ 0.07
APTX-233ENST00000496030 HSPA1AP0DMV8 641 aaKnown RBP15.51■□□□□ 0.07
APTX-233ENST00000496030 HSPA1BP0DMV9 641 aaKnown RBP15.51■□□□□ 0.07
APTX-233ENST00000496030 RRAGCQ9HB90 399 aa15.51■□□□□ 0.07
APTX-233ENST00000496030 SBF1O95248 1867 aa15.5■□□□□ 0.07
APTX-233ENST00000496030 CNTNAP4Q9C0A0 1308 aa15.5■□□□□ 0.07
APTX-233ENST00000496030 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
APTX-233ENST00000496030 CRKLP46109 303 aaKnown RBP15.5■□□□□ 0.07
APTX-233ENST00000496030 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
APTX-233ENST00000496030 C4AP0C0L4 1744 aa15.5■□□□□ 0.07
APTX-233ENST00000496030 KCNA3P22001 575 aa15.49■□□□□ 0.07
APTX-233ENST00000496030 TEX13AQ9BXU3 409 aaPredicted RBP15.49■□□□□ 0.07
APTX-233ENST00000496030 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
APTX-233ENST00000496030 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
APTX-233ENST00000496030 KDM2BQ8NHM5 1336 aa15.47■□□□□ 0.07
APTX-233ENST00000496030 RPS6KA4O75676 772 aa15.47■□□□□ 0.07
APTX-233ENST00000496030 SLC34A2O95436 690 aa15.47■□□□□ 0.07
APTX-233ENST00000496030 STARD3NLO95772 234 aa15.47■□□□□ 0.07
APTX-233ENST00000496030 A1BGP04217 495 aa15.47■□□□□ 0.07
APTX-233ENST00000496030 C8orf58Q8NAV2 365 aa15.47■□□□□ 0.07
APTX-233ENST00000496030 RNF181Q9P0P0 153 aa15.47■□□□□ 0.07
APTX-233ENST00000496030 NBPF26B4DH59 902 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms