RNA–Protein interactions for RNA: ENST00000495866.5

NR1H3-226, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-226ENST00000495866 ANP32CO43423 234 aa22.23■■□□□ 1.15
NR1H3-226ENST00000495866 KCNQ3O43525 872 aa22.23■■□□□ 1.15
NR1H3-226ENST00000495866 GYS1P13807 737 aa22.23■■□□□ 1.15
NR1H3-226ENST00000495866 ZBTB1Q9Y2K1 713 aa22.23■■□□□ 1.15
NR1H3-226ENST00000495866 CD2APQ9Y5K6 639 aa22.22■■□□□ 1.15
NR1H3-226ENST00000495866 USP42Q9H9J4 1324 aaKnown RBP22.22■■□□□ 1.15
NR1H3-226ENST00000495866 SNRPA1P09661 255 aaKnown RBP22.21■■□□□ 1.15
NR1H3-226ENST00000495866 KLHL34Q8N239 644 aa22.21■■□□□ 1.15
NR1H3-226ENST00000495866 MMP10P09238 476 aa22.2■■□□□ 1.14
NR1H3-226ENST00000495866 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.14
NR1H3-226ENST00000495866 COL15A1P39059 1388 aa22.2■■□□□ 1.14
NR1H3-226ENST00000495866 A0A087WZG4 1122 aa22.19■■□□□ 1.14
NR1H3-226ENST00000495866 ZPR1O75312 459 aa22.19■■□□□ 1.14
NR1H3-226ENST00000495866 EIF5P55010 431 aaKnown RBP22.19■■□□□ 1.14
NR1H3-226ENST00000495866 BABAM1Q9NWV8 329 aa22.19■■□□□ 1.14
NR1H3-226ENST00000495866 KDM3BQ7LBC6 1761 aa22.18■■□□□ 1.14
NR1H3-226ENST00000495866 CANXP27824 592 aaKnown RBP22.18■■□□□ 1.14
NR1H3-226ENST00000495866 THUMPD2Q9BTF0 503 aaKnown RBP22.18■■□□□ 1.14
NR1H3-226ENST00000495866 NARFQ9UHQ1 456 aa22.18■■□□□ 1.14
NR1H3-226ENST00000495866 IL6STP40189 918 aaPredicted RBP22.17■■□□□ 1.14
NR1H3-226ENST00000495866 MIS18AQ9NYP9 233 aa22.17■■□□□ 1.14
NR1H3-226ENST00000495866 SRP68Q9UHB9 627 aaKnown RBP22.17■■□□□ 1.14
NR1H3-226ENST00000495866 USP16Q9Y5T5 823 aa22.16■■□□□ 1.14
NR1H3-226ENST00000495866 NPM2Q86SE8 214 aaKnown RBP22.15■■□□□ 1.14
NR1H3-226ENST00000495866 PARP3Q9Y6F1 533 aa22.15■■□□□ 1.14
NR1H3-226ENST00000495866 A1BGP04217 495 aa22.14■■□□□ 1.13
NR1H3-226ENST00000495866 EIF4A1P60842 406 aaKnown RBP22.14■■□□□ 1.13
NR1H3-226ENST00000495866 FKBP8Q14318 412 aa22.14■■□□□ 1.13
NR1H3-226ENST00000495866 NEUROD2Q15784 382 aa22.14■■□□□ 1.13
NR1H3-226ENST00000495866 USPL1Q5W0Q7 1092 aa22.14■■□□□ 1.13
NR1H3-226ENST00000495866 NLGN2Q8NFZ4 835 aa22.14■■□□□ 1.13
NR1H3-226ENST00000495866 RRP7AQ9Y3A4 280 aaKnown RBP22.14■■□□□ 1.13
NR1H3-226ENST00000495866 GIGYF1O75420 1035 aaPredicted RBP22.12■■□□□ 1.13
NR1H3-226ENST00000495866 TSPYL4Q9UJ04 414 aa22.12■■□□□ 1.13
NR1H3-226ENST00000495866 TRIM35Q9UPQ4 493 aa22.12■■□□□ 1.13
NR1H3-226ENST00000495866 KIF13BQ9NQT8 1826 aa22.11■■□□□ 1.13
NR1H3-226ENST00000495866 PRAMEF22A3QJZ6 481 aa22.11■■□□□ 1.13
NR1H3-226ENST00000495866 TM4SF1P30408 202 aa22.11■■□□□ 1.13
NR1H3-226ENST00000495866 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
NR1H3-226ENST00000495866 LAMB4A4D0S4 1761 aa22.1■■□□□ 1.13
NR1H3-226ENST00000495866 MRS2Q9HD23 443 aa22.1■■□□□ 1.13
NR1H3-226ENST00000495866 C10orf71Q711Q0 1435 aa22.09■■□□□ 1.13
NR1H3-226ENST00000495866 APAF1O14727 1248 aa22.09■■□□□ 1.13
NR1H3-226ENST00000495866 GPR162Q16538 588 aa22.09■■□□□ 1.13
NR1H3-226ENST00000495866 BCL2L12Q9HB09 334 aa22.09■■□□□ 1.13
NR1H3-226ENST00000495866 CHL1O00533 1208 aa22.08■■□□□ 1.13
NR1H3-226ENST00000495866 TGFB2P61812 414 aa22.08■■□□□ 1.13
NR1H3-226ENST00000495866 DDR1Q08345 913 aa22.08■■□□□ 1.13
NR1H3-226ENST00000495866 ZNF330Q9Y3S2 320 aaPredicted RBP22.08■■□□□ 1.13
NR1H3-226ENST00000495866 POLRMTO00411 1230 aaKnown RBP22.07■■□□□ 1.12
NR1H3-226ENST00000495866 RGL2O15211 777 aa22.07■■□□□ 1.12
NR1H3-226ENST00000495866 TBC1D2BQ9UPU7 963 aa22.07■■□□□ 1.12
NR1H3-226ENST00000495866 NBPF26B4DH59 902 aa22.06■■□□□ 1.12
NR1H3-226ENST00000495866 CALD1Q05682 793 aaKnown RBP22.06■■□□□ 1.12
NR1H3-226ENST00000495866 NFIXQ14938 502 aa22.06■■□□□ 1.12
NR1H3-226ENST00000495866 NBPF10Q6P3W6 841 aaKnown RBP22.06■■□□□ 1.12
NR1H3-226ENST00000495866 DZIP3Q86Y13 1208 aaKnown RBP22.06■■□□□ 1.12
NR1H3-226ENST00000495866 NBPF15Q8N660 670 aa22.06■■□□□ 1.12
NR1H3-226ENST00000495866 SCN7AQ01118 1682 aa22.06■■□□□ 1.12
NR1H3-226ENST00000495866 GRIN3BO60391 1043 aa22.05■■□□□ 1.12
NR1H3-226ENST00000495866 ERBB4Q15303 1308 aa22.05■■□□□ 1.12
NR1H3-226ENST00000495866 CAMTA2O94983 1202 aa22.04■■□□□ 1.12
NR1H3-226ENST00000495866 CLEC4GQ6UXB4 293 aa22.04■■□□□ 1.12
NR1H3-226ENST00000495866 CFAP44Q96MT7 982 aa22.04■■□□□ 1.12
NR1H3-226ENST00000495866 CHD4Q14839 1912 aa22.04■■□□□ 1.12
NR1H3-226ENST00000495866 PIP4K2AP48426 406 aaPredicted RBP22.03■■□□□ 1.12
NR1H3-226ENST00000495866 PELP1Q8IZL8 1130 aaKnown RBP22.03■■□□□ 1.12
NR1H3-226ENST00000495866 NCBP3Q53F19 620 aaKnown RBP22.02■■□□□ 1.12
NR1H3-226ENST00000495866 ZNF652Q9Y2D9 606 aa22.02■■□□□ 1.12
NR1H3-226ENST00000495866 NRXN2Q9P2S2 1712 aa22.02■■□□□ 1.12
NR1H3-226ENST00000495866 PXDNLA1KZ92 1463 aa22.02■■□□□ 1.12
NR1H3-226ENST00000495866 BCORQ6W2J9 1755 aa22.02■■□□□ 1.11
NR1H3-226ENST00000495866 GOLGB1Q14789 3259 aaKnown RBP22.02■■□□□ 1.11
NR1H3-226ENST00000495866 AFDNP55196 1824 aaKnown RBP22.01■■□□□ 1.11
NR1H3-226ENST00000495866 SERPINB2P05120 415 aa22.01■■□□□ 1.11
NR1H3-226ENST00000495866 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
NR1H3-226ENST00000495866 UTRNP46939 3433 aa22.01■■□□□ 1.11
NR1H3-226ENST00000495866 KIAA1551Q9HCM1 1747 aa22■■□□□ 1.11
NR1H3-226ENST00000495866 YBX3P16989 372 aaKnown RBP eCLIP22■■□□□ 1.11
NR1H3-226ENST00000495866 TBC1D9BQ66K14 1250 aa22■■□□□ 1.11
NR1H3-226ENST00000495866 IFT57Q9NWB7 429 aa22■■□□□ 1.11
NR1H3-226ENST00000495866 ZNF853P0CG23 659 aa21.99■■□□□ 1.11
NR1H3-226ENST00000495866 GNAI1P63096 354 aa21.99■■□□□ 1.11
NR1H3-226ENST00000495866 CCDC27Q2M243 656 aa21.99■■□□□ 1.11
NR1H3-226ENST00000495866 SETDB2Q96T68 719 aa21.99■■□□□ 1.11
NR1H3-226ENST00000495866 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
NR1H3-226ENST00000495866 HOXB7P09629 217 aa21.98■■□□□ 1.11
NR1H3-226ENST00000495866 YY1P25490 414 aa21.98■■□□□ 1.11
NR1H3-226ENST00000495866 BICDL1Q6ZP65 573 aa21.98■■□□□ 1.11
NR1H3-226ENST00000495866 N4BP2Q86UW6 1770 aaPredicted RBP21.97■■□□□ 1.11
NR1H3-226ENST00000495866 A0A0G2JLW4 131 aa21.97■■□□□ 1.11
NR1H3-226ENST00000495866 DPEP1P16444 411 aa21.97■■□□□ 1.11
NR1H3-226ENST00000495866 ERVV-1B6SEH8 477 aa21.96■■□□□ 1.11
NR1H3-226ENST00000495866 EIF2S2P20042 333 aaKnown RBP21.96■■□□□ 1.11
NR1H3-226ENST00000495866 MBIPQ9NS73 344 aa21.95■■□□□ 1.1
NR1H3-226ENST00000495866 BRCA1P38398 1863 aaKnown RBP21.94■■□□□ 1.1
NR1H3-226ENST00000495866 MYL6BP14649 208 aa21.94■■□□□ 1.1
NR1H3-226ENST00000495866 KIF6Q6ZMV9 814 aa21.94■■□□□ 1.1
NR1H3-226ENST00000495866 PIM2Q9P1W9 311 aa21.94■■□□□ 1.1
NR1H3-226ENST00000495866 PDZRN3Q9UPQ7 1066 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms