RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 SLC39A6Q13433 755 aa10.36□□□□□ -0.75
PTPRK-214ENST00000495748 USPL1Q5W0Q7 1092 aa10.36□□□□□ -0.75
PTPRK-214ENST00000495748 PDZRN3Q9UPQ7 1066 aa10.36□□□□□ -0.75
PTPRK-214ENST00000495748 COL15A1P39059 1388 aa10.36□□□□□ -0.75
PTPRK-214ENST00000495748 MRC1P22897 1456 aa10.36□□□□□ -0.75
PTPRK-214ENST00000495748 KIF3CO14782 793 aa10.35□□□□□ -0.75
PTPRK-214ENST00000495748 KCNA3P22001 575 aa10.35□□□□□ -0.75
PTPRK-214ENST00000495748 C9orf131Q5VYM1 1079 aa10.35□□□□□ -0.75
PTPRK-214ENST00000495748 C16orf71Q8IYS4 520 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-214ENST00000495748 KDM2BQ8NHM5 1336 aa10.34□□□□□ -0.75
PTPRK-214ENST00000495748 N4BP2Q86UW6 1770 aaPredicted RBP10.34□□□□□ -0.75
PTPRK-214ENST00000495748 TJP1Q07157 1748 aa10.34□□□□□ -0.75
PTPRK-214ENST00000495748 SERPINB2P05120 415 aa10.34□□□□□ -0.75
PTPRK-214ENST00000495748 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
PTPRK-214ENST00000495748 APLP1P51693 650 aa10.34□□□□□ -0.75
PTPRK-214ENST00000495748 ZBTB1Q9Y2K1 713 aa10.34□□□□□ -0.75
PTPRK-214ENST00000495748 ZC3H4Q9UPT8 1303 aaKnown RBP10.33□□□□□ -0.76
PTPRK-214ENST00000495748 NFIXQ14938 502 aa10.33□□□□□ -0.76
PTPRK-214ENST00000495748 ZNF790Q6PG37 636 aa10.33□□□□□ -0.76
PTPRK-214ENST00000495748 FMNL2Q96PY5 1086 aa10.33□□□□□ -0.76
PTPRK-214ENST00000495748 RNF181Q9P0P0 153 aa10.33□□□□□ -0.76
PTPRK-214ENST00000495748 KIAA1551Q9HCM1 1747 aa10.33□□□□□ -0.76
PTPRK-214ENST00000495748 HEG1Q9ULI3 1381 aa10.32□□□□□ -0.76
PTPRK-214ENST00000495748 H0YIN7 160 aa10.32□□□□□ -0.76
PTPRK-214ENST00000495748 CHRNA5P30532 468 aa10.32□□□□□ -0.76
PTPRK-214ENST00000495748 IL6STP40189 918 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-214ENST00000495748 EIF5P55010 431 aaKnown RBP10.32□□□□□ -0.76
PTPRK-214ENST00000495748 CNGB1Q14028 1251 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-214ENST00000495748 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
PTPRK-214ENST00000495748 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
PTPRK-214ENST00000495748 ARFGEF1Q9Y6D6 1849 aa10.32□□□□□ -0.76
PTPRK-214ENST00000495748 KCPQ6ZWJ8 1503 aa10.32□□□□□ -0.76
PTPRK-214ENST00000495748 NPHP1O15259 732 aa10.31□□□□□ -0.76
PTPRK-214ENST00000495748 NEFMP07197 916 aa10.31□□□□□ -0.76
PTPRK-214ENST00000495748 RTF1Q92541 710 aaKnown RBP10.31□□□□□ -0.76
PTPRK-214ENST00000495748 ZNF496Q96IT1 587 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-214ENST00000495748 CEP350Q5VT06 3117 aa10.31□□□□□ -0.76
PTPRK-214ENST00000495748 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
PTPRK-214ENST00000495748 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 LMNB1P20700 586 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 PRKAR2BP31323 418 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 PDE6BP35913 854 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 FSTL1Q12841 308 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 C2CD5Q86YS7 1000 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 IL17REQ8NFR9 667 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 NMRK2Q9NPI5 230 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 ZNF330Q9Y3S2 320 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-214ENST00000495748 ADAMTS7Q9UKP4 1686 aa10.3□□□□□ -0.76
PTPRK-214ENST00000495748 COL3A1P02461 1466 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-214ENST00000495748 U2AF1L5P0DN76 240 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-214ENST00000495748 U2AF1Q01081 240 aaKnown RBP eCLIP10.29□□□□□ -0.76
PTPRK-214ENST00000495748 BICDL1Q6ZP65 573 aa10.29□□□□□ -0.76
PTPRK-214ENST00000495748 BRIP1Q9BX63 1249 aa10.29□□□□□ -0.76
PTPRK-214ENST00000495748 BCL2L12Q9HB09 334 aa10.29□□□□□ -0.76
PTPRK-214ENST00000495748 VIRMAQ69YN4 1812 aaKnown RBP10.28□□□□□ -0.76
PTPRK-214ENST00000495748 CARMIL3Q8ND23 1372 aa10.28□□□□□ -0.76
PTPRK-214ENST00000495748 CEMIPQ8WUJ3 1361 aa10.28□□□□□ -0.76
PTPRK-214ENST00000495748 HTATSF1O43719 755 aaKnown RBP10.28□□□□□ -0.76
PTPRK-214ENST00000495748 ST5P78524 1137 aa10.28□□□□□ -0.76
PTPRK-214ENST00000495748 SETDB2Q96T68 719 aa10.28□□□□□ -0.76
PTPRK-214ENST00000495748 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
PTPRK-214ENST00000495748 TBC1D2BQ9UPU7 963 aa10.28□□□□□ -0.76
PTPRK-214ENST00000495748 ZNF652Q9Y2D9 606 aa10.28□□□□□ -0.76
PTPRK-214ENST00000495748 UBR2Q8IWV8 1755 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 SNRPA1P09661 255 aaKnown RBP10.27□□□□□ -0.77
PTPRK-214ENST00000495748 SOGA3Q5TF21 947 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 IFFO2Q5TF58 517 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 TBC1D9BQ66K14 1250 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 DPY19L2Q6NUT2 758 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 CLEC4GQ6UXB4 293 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 CNBD1Q8NA66 436 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 SMC1BQ8NDV3 1235 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
PTPRK-214ENST00000495748 ZNF622Q969S3 477 aaKnown RBP eCLIP10.27□□□□□ -0.77
PTPRK-214ENST00000495748 GLTPD2A6NH11 291 aa10.26□□□□□ -0.77
PTPRK-214ENST00000495748 RGL2O15211 777 aa10.26□□□□□ -0.77
PTPRK-214ENST00000495748 VEGFAP15692 232 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-214ENST00000495748 PPP2R1AP30153 589 aa10.26□□□□□ -0.77
PTPRK-214ENST00000495748 DZIP3Q86Y13 1208 aaKnown RBP10.26□□□□□ -0.77
PTPRK-214ENST00000495748 PHACTR3Q96KR7 559 aa10.26□□□□□ -0.77
PTPRK-214ENST00000495748 PNNQ9H307 717 aaKnown RBP10.26□□□□□ -0.77
PTPRK-214ENST00000495748 RRAGCQ9HB90 399 aa10.26□□□□□ -0.77
PTPRK-214ENST00000495748 NRXN2Q9P2S2 1712 aa10.26□□□□□ -0.77
PTPRK-214ENST00000495748 AFDNP55196 1824 aaKnown RBP10.26□□□□□ -0.77
PTPRK-214ENST00000495748 CAMTA2O94983 1202 aa10.25□□□□□ -0.77
PTPRK-214ENST00000495748 A1BGP04217 495 aa10.25□□□□□ -0.77
PTPRK-214ENST00000495748 RASSF7Q02833 373 aa10.25□□□□□ -0.77
PTPRK-214ENST00000495748 PRR5LQ6MZQ0 368 aa10.25□□□□□ -0.77
PTPRK-214ENST00000495748 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
PTPRK-214ENST00000495748 TAF7Q15545 349 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-214ENST00000495748 STYK1Q6J9G0 422 aa10.24□□□□□ -0.77
PTPRK-214ENST00000495748 NBPF5PQ86XG9 351 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-214ENST00000495748 MASTLQ96GX5 879 aa10.24□□□□□ -0.77
PTPRK-214ENST00000495748 SBF1O95248 1867 aa10.23□□□□□ -0.77
PTPRK-214ENST00000495748 TNRC6CQ9HCJ0 1690 aaKnown RBP10.23□□□□□ -0.77
PTPRK-214ENST00000495748 KCNQ3O43525 872 aa10.23□□□□□ -0.77
PTPRK-214ENST00000495748 C21orf2O43822 256 aa10.23□□□□□ -0.77
PTPRK-214ENST00000495748 TPTE2Q6XPS3 522 aa10.23□□□□□ -0.77
PTPRK-214ENST00000495748 MCM10Q7L590 875 aa10.23□□□□□ -0.77
PTPRK-214ENST00000495748 DNAJC5GQ8N7S2 189 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms