RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 RTF1Q92541 710 aaKnown RBP18.98■□□□□ 0.63
RPRD1B-206ENST00000495457 PXDNLA1KZ92 1463 aa18.97■□□□□ 0.63
RPRD1B-206ENST00000495457 SIPA1L3O60292 1781 aaPredicted RBP18.97■□□□□ 0.63
RPRD1B-206ENST00000495457 ZPR1O75312 459 aa18.97■□□□□ 0.63
RPRD1B-206ENST00000495457 STARD3NLO95772 234 aa18.97■□□□□ 0.63
RPRD1B-206ENST00000495457 FMNL2Q96PY5 1086 aa18.96■□□□□ 0.63
RPRD1B-206ENST00000495457 A0A0G2JLW4 131 aa18.95■□□□□ 0.62
RPRD1B-206ENST00000495457 TGFB2P61812 414 aa18.95■□□□□ 0.62
RPRD1B-206ENST00000495457 RALBP1Q15311 655 aa18.95■□□□□ 0.62
RPRD1B-206ENST00000495457 PLEKHF1Q96S99 279 aa18.95■□□□□ 0.62
RPRD1B-206ENST00000495457 NARFQ9UHQ1 456 aa18.95■□□□□ 0.62
RPRD1B-206ENST00000495457 CHD4Q14839 1912 aa18.95■□□□□ 0.62
RPRD1B-206ENST00000495457 HTATSF1O43719 755 aaKnown RBP18.94■□□□□ 0.62
RPRD1B-206ENST00000495457 TM4SF1P30408 202 aa18.94■□□□□ 0.62
RPRD1B-206ENST00000495457 BCL2L12Q9HB09 334 aa18.94■□□□□ 0.62
RPRD1B-206ENST00000495457 POLRMTO00411 1230 aaKnown RBP18.93■□□□□ 0.62
RPRD1B-206ENST00000495457 DPEP1P16444 411 aa18.93■□□□□ 0.62
RPRD1B-206ENST00000495457 EIF5P55010 431 aaKnown RBP18.93■□□□□ 0.62
RPRD1B-206ENST00000495457 TEX13AQ9BXU3 409 aaPredicted RBP18.93■□□□□ 0.62
RPRD1B-206ENST00000495457 KIAA1551Q9HCM1 1747 aa18.92■□□□□ 0.62
RPRD1B-206ENST00000495457 PRAMEF22A3QJZ6 481 aa18.92■□□□□ 0.62
RPRD1B-206ENST00000495457 A1BGP04217 495 aa18.92■□□□□ 0.62
RPRD1B-206ENST00000495457 NEFMP07197 916 aa18.92■□□□□ 0.62
RPRD1B-206ENST00000495457 NFIXQ14938 502 aa18.92■□□□□ 0.62
RPRD1B-206ENST00000495457 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
RPRD1B-206ENST00000495457 KIF13BQ9NQT8 1826 aa18.92■□□□□ 0.62
RPRD1B-206ENST00000495457 BCS1LQ9Y276 419 aa18.91■□□□□ 0.62
RPRD1B-206ENST00000495457 USP16Q9Y5T5 823 aa18.91■□□□□ 0.62
RPRD1B-206ENST00000495457 KCNA3P22001 575 aa18.9■□□□□ 0.62
RPRD1B-206ENST00000495457 MIS18AQ9NYP9 233 aa18.9■□□□□ 0.62
RPRD1B-206ENST00000495457 N4BP2Q86UW6 1770 aaPredicted RBP18.89■□□□□ 0.61
RPRD1B-206ENST00000495457 PIP4K2AP48426 406 aaPredicted RBP18.89■□□□□ 0.61
RPRD1B-206ENST00000495457 TAF7Q15545 349 aaPredicted RBP18.89■□□□□ 0.61
RPRD1B-206ENST00000495457 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
RPRD1B-206ENST00000495457 THUMPD2Q9BTF0 503 aaKnown RBP18.89■□□□□ 0.61
RPRD1B-206ENST00000495457 TBC1D2BQ9UPU7 963 aa18.89■□□□□ 0.61
RPRD1B-206ENST00000495457 A0A087WZG4 1122 aa18.88■□□□□ 0.61
RPRD1B-206ENST00000495457 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
RPRD1B-206ENST00000495457 BICDL1Q6ZP65 573 aa18.88■□□□□ 0.61
RPRD1B-206ENST00000495457 MYBBP1AQ9BQG0 1328 aaKnown RBP18.88■□□□□ 0.61
RPRD1B-206ENST00000495457 MAPK8IP3Q9UPT6 1336 aa18.88■□□□□ 0.61
RPRD1B-206ENST00000495457 SNRPA1P09661 255 aaKnown RBP18.87■□□□□ 0.61
RPRD1B-206ENST00000495457 CHRNA5P30532 468 aa18.87■□□□□ 0.61
RPRD1B-206ENST00000495457 SERPINB2P05120 415 aa18.86■□□□□ 0.61
RPRD1B-206ENST00000495457 TBC1D9BQ66K14 1250 aa18.86■□□□□ 0.61
RPRD1B-206ENST00000495457 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
RPRD1B-206ENST00000495457 ATP10DQ9P241 1426 aa18.84■□□□□ 0.61
RPRD1B-206ENST00000495457 CAMTA2O94983 1202 aa18.84■□□□□ 0.61
RPRD1B-206ENST00000495457 PIM2Q9P1W9 311 aa18.84■□□□□ 0.61
RPRD1B-206ENST00000495457 ADCY9O60503 1353 aa18.83■□□□□ 0.61
RPRD1B-206ENST00000495457 CARMIL3Q8ND23 1372 aa18.83■□□□□ 0.61
RPRD1B-206ENST00000495457 NPM2Q86SE8 214 aaKnown RBP18.83■□□□□ 0.6
RPRD1B-206ENST00000495457 DZIP3Q86Y13 1208 aaKnown RBP18.83■□□□□ 0.6
RPRD1B-206ENST00000495457 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
RPRD1B-206ENST00000495457 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
RPRD1B-206ENST00000495457 ARHGAP27Q6ZUM4 889 aa18.82■□□□□ 0.6
RPRD1B-206ENST00000495457 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
RPRD1B-206ENST00000495457 DLG5Q8TDM6 1919 aa18.82■□□□□ 0.6
RPRD1B-206ENST00000495457 RIPK4P57078 832 aa18.81■□□□□ 0.6
RPRD1B-206ENST00000495457 DALRD3Q5D0E6 543 aaKnown RBP18.81■□□□□ 0.6
RPRD1B-206ENST00000495457 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
RPRD1B-206ENST00000495457 PNISRQ8TF01 805 aaKnown RBP18.81■□□□□ 0.6
RPRD1B-206ENST00000495457 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
RPRD1B-206ENST00000495457 SCN7AQ01118 1682 aa18.81■□□□□ 0.6
RPRD1B-206ENST00000495457 NRXN2Q9P2S2 1712 aa18.8■□□□□ 0.6
RPRD1B-206ENST00000495457 EIF4A1P60842 406 aaKnown RBP18.8■□□□□ 0.6
RPRD1B-206ENST00000495457 CCDC24Q8N4L8 307 aa18.8■□□□□ 0.6
RPRD1B-206ENST00000495457 ZNF526Q8TF50 670 aaPredicted RBP18.8■□□□□ 0.6
RPRD1B-206ENST00000495457 RRP7AQ9Y3A4 280 aaKnown RBP18.8■□□□□ 0.6
RPRD1B-206ENST00000495457 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
RPRD1B-206ENST00000495457 AFDNP55196 1824 aaKnown RBP18.79■□□□□ 0.6
RPRD1B-206ENST00000495457 GIGYF1O75420 1035 aaPredicted RBP18.79■□□□□ 0.6
RPRD1B-206ENST00000495457 TMPOP42166 694 aaKnown RBP18.79■□□□□ 0.6
RPRD1B-206ENST00000495457 PRR5LQ6MZQ0 368 aa18.78■□□□□ 0.6
RPRD1B-206ENST00000495457 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
RPRD1B-206ENST00000495457 C1QTNF8P60827 252 aa18.77■□□□□ 0.6
RPRD1B-206ENST00000495457 WDR43Q15061 677 aaKnown RBP eCLIP18.77■□□□□ 0.6
RPRD1B-206ENST00000495457 C2CD5Q86YS7 1000 aa18.77■□□□□ 0.6
RPRD1B-206ENST00000495457 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
RPRD1B-206ENST00000495457 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.6
RPRD1B-206ENST00000495457 NEUROD2Q15784 382 aa18.76■□□□□ 0.59
RPRD1B-206ENST00000495457 GPBP1L1Q9HC44 474 aaPredicted RBP18.76■□□□□ 0.59
RPRD1B-206ENST00000495457 TSPYL4Q9UJ04 414 aa18.76■□□□□ 0.59
RPRD1B-206ENST00000495457 NGEFQ8N5V2 710 aa18.75■□□□□ 0.59
RPRD1B-206ENST00000495457 BCORQ6W2J9 1755 aa18.74■□□□□ 0.59
RPRD1B-206ENST00000495457 H0YIN7 160 aa18.74■□□□□ 0.59
RPRD1B-206ENST00000495457 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
RPRD1B-206ENST00000495457 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
RPRD1B-206ENST00000495457 CNBD1Q8NA66 436 aa18.74■□□□□ 0.59
RPRD1B-206ENST00000495457 RUNDC1Q96C34 613 aa18.74■□□□□ 0.59
RPRD1B-206ENST00000495457 BRIP1Q9BX63 1249 aa18.74■□□□□ 0.59
RPRD1B-206ENST00000495457 LMOD3Q0VAK6 560 aa18.73■□□□□ 0.59
RPRD1B-206ENST00000495457 HLFQ16534 295 aa18.73■□□□□ 0.59
RPRD1B-206ENST00000495457 C9orf131Q5VYM1 1079 aa18.73■□□□□ 0.59
RPRD1B-206ENST00000495457 TTLL6Q8N841 843 aa18.73■□□□□ 0.59
RPRD1B-206ENST00000495457 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
RPRD1B-206ENST00000495457 LAMB4A4D0S4 1761 aa18.73■□□□□ 0.59
RPRD1B-206ENST00000495457 ARFGEF1Q9Y6D6 1849 aa18.72■□□□□ 0.59
RPRD1B-206ENST00000495457 NPHP1O15259 732 aa18.72■□□□□ 0.59
RPRD1B-206ENST00000495457 MYL6BP14649 208 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms