RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-213ENST00000495232 SLC16A10Q8TF71 515 aa15.73■□□□□ 0.11
CSNK1E-213ENST00000495232 IFT57Q9NWB7 429 aa15.73■□□□□ 0.11
CSNK1E-213ENST00000495232 UBR3Q6ZT12 1888 aa15.73■□□□□ 0.11
CSNK1E-213ENST00000495232 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
CSNK1E-213ENST00000495232 ADRA2BP18089 450 aa15.72■□□□□ 0.11
CSNK1E-213ENST00000495232 COL23A1Q86Y22 540 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-213ENST00000495232 PDGFDQ9GZP0 370 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-213ENST00000495232 CASZ1Q86V15 1759 aa15.72■□□□□ 0.11
CSNK1E-213ENST00000495232 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-213ENST00000495232 RFC4P35249 363 aa15.71■□□□□ 0.11
CSNK1E-213ENST00000495232 INTS5Q6P9B9 1019 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-213ENST00000495232 MTFR1LQ9H019 292 aa15.71■□□□□ 0.11
CSNK1E-213ENST00000495232 SPON1Q9HCB6 807 aa15.71■□□□□ 0.11
CSNK1E-213ENST00000495232 MYH14Q7Z406 1995 aaKnown RBP15.71■□□□□ 0.1
CSNK1E-213ENST00000495232 PRAMEF22A3QJZ6 481 aa15.7■□□□□ 0.1
CSNK1E-213ENST00000495232 GIGYF1O75420 1035 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-213ENST00000495232 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
CSNK1E-213ENST00000495232 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
CSNK1E-213ENST00000495232 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
CSNK1E-213ENST00000495232 ZBTB1Q9Y2K1 713 aa15.7■□□□□ 0.1
CSNK1E-213ENST00000495232 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-213ENST00000495232 USP16Q9Y5T5 823 aa15.7■□□□□ 0.1
CSNK1E-213ENST00000495232 ARHGEF1Q92888 912 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-213ENST00000495232 ATF5Q9Y2D1 282 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-213ENST00000495232 SRCAPQ6ZRS2 3230 aa15.69■□□□□ 0.1
CSNK1E-213ENST00000495232 IL16Q14005 1332 aa15.68■□□□□ 0.1
CSNK1E-213ENST00000495232 A1BGP04217 495 aa15.68■□□□□ 0.1
CSNK1E-213ENST00000495232 ZNF853P0CG23 659 aa15.68■□□□□ 0.1
CSNK1E-213ENST00000495232 AMIGO3Q86WK7 504 aa15.68■□□□□ 0.1
CSNK1E-213ENST00000495232 ARXQ96QS3 562 aa15.68■□□□□ 0.1
CSNK1E-213ENST00000495232 SOS1Q07889 1333 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-213ENST00000495232 LAMB4A4D0S4 1761 aa15.67■□□□□ 0.1
CSNK1E-213ENST00000495232 A0A087WZG4 1122 aa15.67■□□□□ 0.1
CSNK1E-213ENST00000495232 ZPR1O75312 459 aa15.67■□□□□ 0.1
CSNK1E-213ENST00000495232 EIF2S2P20042 333 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-213ENST00000495232 POLD1P28340 1107 aa15.67■□□□□ 0.1
CSNK1E-213ENST00000495232 IL6STP40189 918 aaPredicted RBP15.67■□□□□ 0.1
CSNK1E-213ENST00000495232 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
CSNK1E-213ENST00000495232 COL15A1P39059 1388 aa15.66■□□□□ 0.1
CSNK1E-213ENST00000495232 MSL1Q68DK7 614 aa15.65■□□□□ 0.1
CSNK1E-213ENST00000495232 TSR2Q969E8 191 aaKnown RBP15.65■□□□□ 0.1
CSNK1E-213ENST00000495232 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
CSNK1E-213ENST00000495232 HOXB7P09629 217 aa15.64■□□□□ 0.09
CSNK1E-213ENST00000495232 PIP4K2AP48426 406 aaPredicted RBP15.64■□□□□ 0.09
CSNK1E-213ENST00000495232 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
CSNK1E-213ENST00000495232 KRT24Q2M2I5 525 aa15.64■□□□□ 0.09
CSNK1E-213ENST00000495232 NLGN1Q8N2Q7 840 aa15.64■□□□□ 0.09
CSNK1E-213ENST00000495232 CHMP4AQ9BY43 222 aa15.64■□□□□ 0.09
CSNK1E-213ENST00000495232 MYL6BP14649 208 aa15.63■□□□□ 0.09
CSNK1E-213ENST00000495232 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
CSNK1E-213ENST00000495232 DUSP27Q5VZP5 1158 aa15.63■□□□□ 0.09
CSNK1E-213ENST00000495232 NECTIN2Q92692 538 aa15.63■□□□□ 0.09
CSNK1E-213ENST00000495232 NARFQ9UHQ1 456 aa15.63■□□□□ 0.09
CSNK1E-213ENST00000495232 LRP5O75197 1615 aa15.63■□□□□ 0.09
CSNK1E-213ENST00000495232 ERBB4Q15303 1308 aa15.63■□□□□ 0.09
CSNK1E-213ENST00000495232 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
CSNK1E-213ENST00000495232 ELL2O00472 640 aaPredicted RBP15.62■□□□□ 0.09
CSNK1E-213ENST00000495232 HDGFL1Q5TGJ6 251 aa15.62■□□□□ 0.09
CSNK1E-213ENST00000495232 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
CSNK1E-213ENST00000495232 SRP68Q9UHB9 627 aaKnown RBP15.62■□□□□ 0.09
CSNK1E-213ENST00000495232 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
CSNK1E-213ENST00000495232 NBPF26B4DH59 902 aa15.61■□□□□ 0.09
CSNK1E-213ENST00000495232 GYS1P13807 737 aa15.61■□□□□ 0.09
CSNK1E-213ENST00000495232 PTGER2P43116 358 aa15.61■□□□□ 0.09
CSNK1E-213ENST00000495232 NBPF10Q6P3W6 841 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-213ENST00000495232 DZIP3Q86Y13 1208 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-213ENST00000495232 NBPF15Q8N660 670 aa15.61■□□□□ 0.09
CSNK1E-213ENST00000495232 TBC1D2BQ9UPU7 963 aa15.61■□□□□ 0.09
CSNK1E-213ENST00000495232 FANCIQ9NVI1 1328 aa15.61■□□□□ 0.09
CSNK1E-213ENST00000495232 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.09
CSNK1E-213ENST00000495232 C8orf58Q8NAV2 365 aa15.6■□□□□ 0.09
CSNK1E-213ENST00000495232 ZNF521Q96K83 1311 aa15.6■□□□□ 0.09
CSNK1E-213ENST00000495232 E9PSI1 815 aa15.59■□□□□ 0.09
CSNK1E-213ENST00000495232 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
CSNK1E-213ENST00000495232 KIF6Q6ZMV9 814 aa15.59■□□□□ 0.09
CSNK1E-213ENST00000495232 DBF4Q9UBU7 674 aaPredicted RBP15.59■□□□□ 0.09
CSNK1E-213ENST00000495232 ZNF652Q9Y2D9 606 aa15.59■□□□□ 0.09
CSNK1E-213ENST00000495232 FKBP8Q14318 412 aa15.58■□□□□ 0.08
CSNK1E-213ENST00000495232 CCDC30Q5VVM6 783 aa15.58■□□□□ 0.08
CSNK1E-213ENST00000495232 KLHL34Q8N239 644 aa15.58■□□□□ 0.08
CSNK1E-213ENST00000495232 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
CSNK1E-213ENST00000495232 DDX21Q9NR30 783 aaKnown RBP eCLIP15.58■□□□□ 0.08
CSNK1E-213ENST00000495232 CHPF2Q9P2E5 772 aa15.58■□□□□ 0.08
CSNK1E-213ENST00000495232 PARP3Q9Y6F1 533 aa15.58■□□□□ 0.08
CSNK1E-213ENST00000495232 MMP10P09238 476 aa15.57■□□□□ 0.08
CSNK1E-213ENST00000495232 EXOSC9Q06265 439 aaKnown RBP15.57■□□□□ 0.08
CSNK1E-213ENST00000495232 TSPYL6Q8N831 410 aa15.57■□□□□ 0.08
CSNK1E-213ENST00000495232 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-213ENST00000495232 COL24A1Q17RW2 1714 aa15.57■□□□□ 0.08
CSNK1E-213ENST00000495232 ANXA1P04083 346 aa15.56■□□□□ 0.08
CSNK1E-213ENST00000495232 STK31Q9BXU1 1019 aa15.56■□□□□ 0.08
CSNK1E-213ENST00000495232 HYPKQ9NX55 129 aa15.56■□□□□ 0.08
CSNK1E-213ENST00000495232 CAMTA2O94983 1202 aa15.55■□□□□ 0.08
CSNK1E-213ENST00000495232 SLFN5Q08AF3 891 aa15.55■□□□□ 0.08
CSNK1E-213ENST00000495232 AIMP1Q12904 312 aaKnown RBP15.55■□□□□ 0.08
CSNK1E-213ENST00000495232 PDIA6Q15084 440 aa15.55■□□□□ 0.08
CSNK1E-213ENST00000495232 CLEC4GQ6UXB4 293 aa15.55■□□□□ 0.08
CSNK1E-213ENST00000495232 BICDL1Q6ZP65 573 aa15.55■□□□□ 0.08
CSNK1E-213ENST00000495232 SCN7AQ01118 1682 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms