RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 BABAM1Q9NWV8 329 aa21.25■□□□□ 0.99
YIF1A-209ENST00000494836 SNRPA1P09661 255 aaKnown RBP21.24■□□□□ 0.99
YIF1A-209ENST00000494836 TRAPPC3LQ5T215 181 aa21.24■□□□□ 0.99
YIF1A-209ENST00000494836 ZBTB1Q9Y2K1 713 aa21.23■□□□□ 0.99
YIF1A-209ENST00000494836 EIF4A1P60842 406 aaKnown RBP21.22■□□□□ 0.99
YIF1A-209ENST00000494836 CALD1Q05682 793 aaKnown RBP21.22■□□□□ 0.99
YIF1A-209ENST00000494836 LAS1LQ9Y4W2 734 aaKnown RBP21.22■□□□□ 0.99
YIF1A-209ENST00000494836 C4AP0C0L4 1744 aa21.21■□□□□ 0.99
YIF1A-209ENST00000494836 LAMB4A4D0S4 1761 aa21.21■□□□□ 0.99
YIF1A-209ENST00000494836 SENP3-EIF4A1A0A087X0R7 540 aa21.21■□□□□ 0.99
YIF1A-209ENST00000494836 PTGER2P43116 358 aa21.21■□□□□ 0.99
YIF1A-209ENST00000494836 SOS1Q07889 1333 aaPredicted RBP21.21■□□□□ 0.99
YIF1A-209ENST00000494836 COL24A1Q17RW2 1714 aa21.21■□□□□ 0.99
YIF1A-209ENST00000494836 PRAMEF22A3QJZ6 481 aa21.2■□□□□ 0.98
YIF1A-209ENST00000494836 CHL1O00533 1208 aa21.2■□□□□ 0.98
YIF1A-209ENST00000494836 CANXP27824 592 aaKnown RBP21.2■□□□□ 0.98
YIF1A-209ENST00000494836 RFC4P35249 363 aa21.2■□□□□ 0.98
YIF1A-209ENST00000494836 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
YIF1A-209ENST00000494836 ARHGEF1Q92888 912 aaKnown RBP21.2■□□□□ 0.98
YIF1A-209ENST00000494836 PPP1R1BQ9UD71 204 aaPredicted RBP21.2■□□□□ 0.98
YIF1A-209ENST00000494836 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
YIF1A-209ENST00000494836 MSL1Q68DK7 614 aa21.19■□□□□ 0.98
YIF1A-209ENST00000494836 CFAP44Q96MT7 982 aa21.19■□□□□ 0.98
YIF1A-209ENST00000494836 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
YIF1A-209ENST00000494836 USP16Q9Y5T5 823 aa21.19■□□□□ 0.98
YIF1A-209ENST00000494836 COL15A1P39059 1388 aa21.19■□□□□ 0.98
YIF1A-209ENST00000494836 GIGYF1O75420 1035 aaPredicted RBP21.18■□□□□ 0.98
YIF1A-209ENST00000494836 POLD1P28340 1107 aa21.18■□□□□ 0.98
YIF1A-209ENST00000494836 MIER1Q8N108 512 aa21.18■□□□□ 0.98
YIF1A-209ENST00000494836 IFT57Q9NWB7 429 aa21.17■□□□□ 0.98
YIF1A-209ENST00000494836 A1BGP04217 495 aa21.16■□□□□ 0.98
YIF1A-209ENST00000494836 GNAI1P63096 354 aa21.16■□□□□ 0.98
YIF1A-209ENST00000494836 WWC1Q8IX03 1113 aa21.16■□□□□ 0.98
YIF1A-209ENST00000494836 USP42Q9H9J4 1324 aaKnown RBP21.15■□□□□ 0.98
YIF1A-209ENST00000494836 ZNF853P0CG23 659 aa21.15■□□□□ 0.98
YIF1A-209ENST00000494836 IL6STP40189 918 aaPredicted RBP21.15■□□□□ 0.98
YIF1A-209ENST00000494836 ZNF330Q9Y3S2 320 aaPredicted RBP21.15■□□□□ 0.98
YIF1A-209ENST00000494836 SALL2Q9Y467 1007 aaPredicted RBP21.15■□□□□ 0.98
YIF1A-209ENST00000494836 EIF5P55010 431 aaKnown RBP21.14■□□□□ 0.97
YIF1A-209ENST00000494836 NPM2Q86SE8 214 aaKnown RBP21.14■□□□□ 0.97
YIF1A-209ENST00000494836 NGEFQ8N5V2 710 aa21.14■□□□□ 0.97
YIF1A-209ENST00000494836 ARXQ96QS3 562 aa21.14■□□□□ 0.97
YIF1A-209ENST00000494836 MBIPQ9NS73 344 aa21.14■□□□□ 0.97
YIF1A-209ENST00000494836 A0A087WZG4 1122 aa21.13■□□□□ 0.97
YIF1A-209ENST00000494836 ZPR1O75312 459 aa21.13■□□□□ 0.97
YIF1A-209ENST00000494836 GYS1P13807 737 aa21.13■□□□□ 0.97
YIF1A-209ENST00000494836 SRP68Q9UHB9 627 aaKnown RBP21.13■□□□□ 0.97
YIF1A-209ENST00000494836 PIP4K2AP48426 406 aaPredicted RBP21.12■□□□□ 0.97
YIF1A-209ENST00000494836 NLGN1Q8N2Q7 840 aa21.12■□□□□ 0.97
YIF1A-209ENST00000494836 IL16Q14005 1332 aa21.11■□□□□ 0.97
YIF1A-209ENST00000494836 NARFQ9UHQ1 456 aa21.11■□□□□ 0.97
YIF1A-209ENST00000494836 NBPF26B4DH59 902 aa21.1■□□□□ 0.97
YIF1A-209ENST00000494836 KRT24Q2M2I5 525 aa21.1■□□□□ 0.97
YIF1A-209ENST00000494836 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
YIF1A-209ENST00000494836 NBPF10Q6P3W6 841 aaKnown RBP21.1■□□□□ 0.97
YIF1A-209ENST00000494836 NBPF15Q8N660 670 aa21.1■□□□□ 0.97
YIF1A-209ENST00000494836 SCN7AQ01118 1682 aa21.09■□□□□ 0.97
YIF1A-209ENST00000494836 ERBB4Q15303 1308 aa21.08■□□□□ 0.97
YIF1A-209ENST00000494836 MMP10P09238 476 aa21.08■□□□□ 0.97
YIF1A-209ENST00000494836 EIF2S2P20042 333 aaKnown RBP21.08■□□□□ 0.97
YIF1A-209ENST00000494836 WDR63Q8IWG1 891 aa21.08■□□□□ 0.97
YIF1A-209ENST00000494836 HOXB7P09629 217 aa21.07■□□□□ 0.96
YIF1A-209ENST00000494836 FKBP8Q14318 412 aa21.07■□□□□ 0.96
YIF1A-209ENST00000494836 FHDC1Q9C0D6 1143 aaPredicted RBP21.07■□□□□ 0.96
YIF1A-209ENST00000494836 TBC1D2BQ9UPU7 963 aa21.07■□□□□ 0.96
YIF1A-209ENST00000494836 DZIP3Q86Y13 1208 aaKnown RBP21.06■□□□□ 0.96
YIF1A-209ENST00000494836 KLHL34Q8N239 644 aa21.06■□□□□ 0.96
YIF1A-209ENST00000494836 TSR2Q969E8 191 aaKnown RBP21.06■□□□□ 0.96
YIF1A-209ENST00000494836 BCORQ6W2J9 1755 aa21.05■□□□□ 0.96
YIF1A-209ENST00000494836 MYL6BP14649 208 aa21.05■□□□□ 0.96
YIF1A-209ENST00000494836 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
YIF1A-209ENST00000494836 HDGFL1Q5TGJ6 251 aa21.04■□□□□ 0.96
YIF1A-209ENST00000494836 NECTIN2Q92692 538 aa21.04■□□□□ 0.96
YIF1A-209ENST00000494836 BCL2L12Q9HB09 334 aa21.04■□□□□ 0.96
YIF1A-209ENST00000494836 CAMTA2O94983 1202 aa21.03■□□□□ 0.96
YIF1A-209ENST00000494836 PARP3Q9Y6F1 533 aa21.03■□□□□ 0.96
YIF1A-209ENST00000494836 SYT17Q9BSW7 474 aa21.02■□□□□ 0.96
YIF1A-209ENST00000494836 ZNF521Q96K83 1311 aa21.02■□□□□ 0.95
YIF1A-209ENST00000494836 FANCIQ9NVI1 1328 aa21.02■□□□□ 0.95
YIF1A-209ENST00000494836 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
YIF1A-209ENST00000494836 DDR1Q08345 913 aa21.01■□□□□ 0.95
YIF1A-209ENST00000494836 PDIA6Q15084 440 aa21.01■□□□□ 0.95
YIF1A-209ENST00000494836 C8orf58Q8NAV2 365 aa21.01■□□□□ 0.95
YIF1A-209ENST00000494836 TM4SF1P30408 202 aa21■□□□□ 0.95
YIF1A-209ENST00000494836 NFIXQ14938 502 aa21■□□□□ 0.95
YIF1A-209ENST00000494836 PROSER3Q2NL68 480 aa21■□□□□ 0.95
YIF1A-209ENST00000494836 KIF6Q6ZMV9 814 aa21■□□□□ 0.95
YIF1A-209ENST00000494836 MYH16Q9H6N6 1097 aa21■□□□□ 0.95
YIF1A-209ENST00000494836 DDX21Q9NR30 783 aaKnown RBP eCLIP21■□□□□ 0.95
YIF1A-209ENST00000494836 CHPF2Q9P2E5 772 aa21■□□□□ 0.95
YIF1A-209ENST00000494836 ZNF652Q9Y2D9 606 aa21■□□□□ 0.95
YIF1A-209ENST00000494836 ANXA1P04083 346 aa20.99■□□□□ 0.95
YIF1A-209ENST00000494836 CD2APQ9Y5K6 639 aa20.99■□□□□ 0.95
YIF1A-209ENST00000494836 POLRMTO00411 1230 aaKnown RBP20.98■□□□□ 0.95
YIF1A-209ENST00000494836 RGL2O15211 777 aa20.98■□□□□ 0.95
YIF1A-209ENST00000494836 GOLGA2Q08379 1002 aa20.98■□□□□ 0.95
YIF1A-209ENST00000494836 TBC1D9BQ66K14 1250 aa20.98■□□□□ 0.95
YIF1A-209ENST00000494836 CLEC4GQ6UXB4 293 aa20.98■□□□□ 0.95
YIF1A-209ENST00000494836 BICDL1Q6ZP65 573 aa20.98■□□□□ 0.95
YIF1A-209ENST00000494836 TTLL7Q6ZT98 887 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms