RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DNAAF4Q8WXU2 420 aa16.99■□□□□ 0.31
VCP-207ENST00000493886 ABCC6O95255 1503 aa16.98■□□□□ 0.31
VCP-207ENST00000493886 PI4KAP2A4QPH2 592 aa16.98■□□□□ 0.31
VCP-207ENST00000493886 PI4KAP1Q8N8J0 262 aa16.98■□□□□ 0.31
VCP-207ENST00000493886 MEGF6O75095 1541 aa16.98■□□□□ 0.31
VCP-207ENST00000493886 SPG7Q9UQ90 795 aa16.98■□□□□ 0.31
VCP-207ENST00000493886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.97■□□□□ 0.313e-6■■□□□ 14.2
VCP-207ENST00000493886 STRCQ7RTU9 1775 aa16.97■□□□□ 0.31
VCP-207ENST00000493886 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
VCP-207ENST00000493886 CPDO75976 1380 aa16.97■□□□□ 0.31
VCP-207ENST00000493886 PHKG2P15735 406 aa16.97■□□□□ 0.31
VCP-207ENST00000493886 HSCBQ8IWL3 235 aa16.97■□□□□ 0.31
VCP-207ENST00000493886 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
VCP-207ENST00000493886 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.31
VCP-207ENST00000493886 SDSP20132 328 aa16.96■□□□□ 0.31
VCP-207ENST00000493886 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
VCP-207ENST00000493886 ADCY9O60503 1353 aa16.96■□□□□ 0.31
VCP-207ENST00000493886 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.3
VCP-207ENST00000493886 OSBPL3Q9H4L5 887 aa16.96■□□□□ 0.3
VCP-207ENST00000493886 SCN11AQ9UI33 1791 aa16.95■□□□□ 0.3
VCP-207ENST00000493886 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
VCP-207ENST00000493886 IBTKQ9P2D0 1353 aaPredicted RBP16.95■□□□□ 0.3
VCP-207ENST00000493886 KDM4FA0A1W2PPD8 638 aa16.95■□□□□ 0.3
VCP-207ENST00000493886 MCM4P33991 863 aa16.95■□□□□ 0.3
VCP-207ENST00000493886 PDE1AP54750 535 aa16.95■□□□□ 0.3
VCP-207ENST00000493886 PROSER3Q2NL68 480 aa16.95■□□□□ 0.3
VCP-207ENST00000493886 IFNL2Q8IZJ0 200 aa16.94■□□□□ 0.3
VCP-207ENST00000493886 SSH3Q8TE77 659 aa16.94■□□□□ 0.3
VCP-207ENST00000493886 KIF2CQ99661 725 aa16.94■□□□□ 0.3
VCP-207ENST00000493886 NAP1L2Q9ULW6 460 aaPredicted RBP16.94■□□□□ 0.3
VCP-207ENST00000493886 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
VCP-207ENST00000493886 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
VCP-207ENST00000493886 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
VCP-207ENST00000493886 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
VCP-207ENST00000493886 SNX21Q969T3 373 aa16.93■□□□□ 0.3
VCP-207ENST00000493886 SALL3Q9BXA9 1300 aa16.93■□□□□ 0.3
VCP-207ENST00000493886 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
VCP-207ENST00000493886 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
VCP-207ENST00000493886 CHMP5Q9NZZ3 219 aa16.93■□□□□ 0.3
VCP-207ENST00000493886 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
VCP-207ENST00000493886 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
VCP-207ENST00000493886 SLAIN2Q9P270 581 aa16.92■□□□□ 0.3
VCP-207ENST00000493886 MAP3K2Q9Y2U5 619 aa16.92■□□□□ 0.3
VCP-207ENST00000493886 POLA2Q14181 598 aa16.92■□□□□ 0.3
VCP-207ENST00000493886 CASC1Q6TDU7 716 aa16.92■□□□□ 0.3
VCP-207ENST00000493886 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
VCP-207ENST00000493886 TULP1O00294 542 aaPredicted RBP16.91■□□□□ 0.3
VCP-207ENST00000493886 CYP27B1O15528 508 aa16.91■□□□□ 0.3
VCP-207ENST00000493886 DDX21Q9NR30 783 aaKnown RBP eCLIP16.91■□□□□ 0.3
VCP-207ENST00000493886 SOS2Q07890 1332 aaPredicted RBP16.91■□□□□ 0.3
VCP-207ENST00000493886 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
VCP-207ENST00000493886 PANK2Q9BZ23 570 aa16.9■□□□□ 0.3
VCP-207ENST00000493886 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
VCP-207ENST00000493886 ALDH1L1O75891 902 aa16.9■□□□□ 0.3
VCP-207ENST00000493886 MX1P20591 662 aa16.9■□□□□ 0.3
VCP-207ENST00000493886 SRGAP3O43295 1099 aa16.9■□□□□ 0.3
VCP-207ENST00000493886 NAP1L5Q96NT1 182 aaPredicted RBP16.9■□□□□ 0.3
VCP-207ENST00000493886 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
VCP-207ENST00000493886 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
VCP-207ENST00000493886 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
VCP-207ENST00000493886 RAB11FIP3O75154 756 aa16.89■□□□□ 0.29
VCP-207ENST00000493886 SURF6O75683 361 aaKnown RBP16.89■□□□□ 0.29
VCP-207ENST00000493886 CD2BP2O95400 341 aaKnown RBP16.89■□□□□ 0.29
VCP-207ENST00000493886 PDIA6Q15084 440 aa16.89■□□□□ 0.29
VCP-207ENST00000493886 TSHZ3Q63HK5 1081 aa16.89■□□□□ 0.29
VCP-207ENST00000493886 MRC1P22897 1456 aa16.88■□□□□ 0.29
VCP-207ENST00000493886 TRAK2O60296 914 aa16.88■□□□□ 0.29
VCP-207ENST00000493886 USP26Q9BXU7 913 aa16.88■□□□□ 0.29
VCP-207ENST00000493886 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
VCP-207ENST00000493886 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
VCP-207ENST00000493886 HSP90AA2PQ14568 343 aaPredicted RBP16.88■□□□□ 0.29
VCP-207ENST00000493886 C5P01031 1676 aa16.88■□□□□ 0.29
VCP-207ENST00000493886 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
VCP-207ENST00000493886 C9orf78Q9NZ63 289 aaPredicted RBP16.87■□□□□ 0.29
VCP-207ENST00000493886 STAP2Q9UGK3 403 aa16.87■□□□□ 0.29
VCP-207ENST00000493886 GOLGA6L3A6NEY3 463 aa16.87■□□□□ 0.29
VCP-207ENST00000493886 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
VCP-207ENST00000493886 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
VCP-207ENST00000493886 XRCC6P12956 609 aaKnown RBP eCLIP16.86■□□□□ 0.29
VCP-207ENST00000493886 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
VCP-207ENST00000493886 L1TD1Q5T7N2 865 aaKnown RBP16.86■□□□□ 0.29
VCP-207ENST00000493886 BBXQ8WY36 941 aaPredicted RBP16.86■□□□□ 0.29
VCP-207ENST00000493886 CWF19L2Q2TBE0 894 aaKnown RBP16.86■□□□□ 0.29
VCP-207ENST00000493886 TTC5Q8N0Z6 440 aa16.86■□□□□ 0.29
VCP-207ENST00000493886 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
VCP-207ENST00000493886 LINS1Q8NG48 757 aa16.86■□□□□ 0.29
VCP-207ENST00000493886 RHPN1Q8TCX5 695 aa16.86■□□□□ 0.29
VCP-207ENST00000493886 TOM1L2Q6ZVM7 507 aa16.85■□□□□ 0.29
VCP-207ENST00000493886 REC8O95072 547 aa16.85■□□□□ 0.29
VCP-207ENST00000493886 CABP4P57796 275 aa16.85■□□□□ 0.29
VCP-207ENST00000493886 MTX1Q13505 466 aa16.85■□□□□ 0.29
VCP-207ENST00000493886 KIF1BPQ96EK5 621 aa16.85■□□□□ 0.29
VCP-207ENST00000493886 AOX1Q06278 1338 aa16.85■□□□□ 0.29
VCP-207ENST00000493886 ERC2O15083 957 aa16.84■□□□□ 0.29
VCP-207ENST00000493886 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
VCP-207ENST00000493886 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
VCP-207ENST00000493886 MYL6BP14649 208 aa16.84■□□□□ 0.29
VCP-207ENST00000493886 FAM43AQ8N2R8 423 aa16.84■□□□□ 0.29
VCP-207ENST00000493886 RRAGDQ9NQL2 400 aaPredicted RBP16.84■□□□□ 0.29
VCP-207ENST00000493886 COL5A2P05997 1499 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms