RNA–Protein interactions for RNA: ENST00000493222.5

UGP2-223, Transcript of UDP-glucose pyrophosphorylase 2, human

TSL 3

Gene UGP2, Length 864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UGP2-223	ENST00000493222	PHACTR3	Q96KR7	559 aa		27.8	■■■□□ 2.04
UGP2-223	ENST00000493222	CEMIP	Q8WUJ3	1361 aa		27.8	■■■□□ 2.04
UGP2-223	ENST00000493222	SCN7A	Q01118	1682 aa		27.79	■■■□□ 2.04
UGP2-223	ENST00000493222	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.79	■■■□□ 2.04
UGP2-223	ENST00000493222	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
UGP2-223	ENST00000493222	USPL1	Q5W0Q7	1092 aa		27.79	■■■□□ 2.04
UGP2-223	ENST00000493222	C1QTNF8	P60827	252 aa		27.78	■■■□□ 2.04
UGP2-223	ENST00000493222	ZNF790	Q6PG37	636 aa		27.78	■■■□□ 2.04
UGP2-223	ENST00000493222	NRXN2	Q9P2S2	1712 aa		27.78	■■■□□ 2.04
UGP2-223	ENST00000493222	HEG1	Q9ULI3	1381 aa		27.77	■■■□□ 2.04
UGP2-223	ENST00000493222	DPEP1	P16444	411 aa		27.77	■■■□□ 2.04
UGP2-223	ENST00000493222	ZNF496	Q96IT1	587 aa	Predicted RBP	27.77	■■■□□ 2.04
UGP2-223	ENST00000493222	BCS1L	Q9Y276	419 aa		27.77	■■■□□ 2.04
UGP2-223	ENST00000493222	POLRMT	O00411	1230 aa	Known RBP	27.75	■■■□□ 2.03
UGP2-223	ENST00000493222	STARD3NL	O95772	234 aa		27.75	■■■□□ 2.03
UGP2-223	ENST00000493222	NARF	Q9UHQ1	456 aa		27.75	■■■□□ 2.03
UGP2-223	ENST00000493222	CANX	P27824	592 aa	Known RBP	27.74	■■■□□ 2.03
UGP2-223	ENST00000493222	DLG5	Q8TDM6	1919 aa		27.74	■■■□□ 2.03
UGP2-223	ENST00000493222	TM4SF1	P30408	202 aa		27.73	■■■□□ 2.03
UGP2-223	ENST00000493222	DLEC1	Q9Y238	1755 aa		27.73	■■■□□ 2.03
UGP2-223	ENST00000493222	FCHSD2	O94868	740 aa		27.72	■■■□□ 2.03
UGP2-223	ENST00000493222	FMNL2	Q96PY5	1086 aa		27.71	■■■□□ 2.03
UGP2-223	ENST00000493222	BTBD11	A6QL63	1104 aa		27.7	■■■□□ 2.02
UGP2-223	ENST00000493222	KCNA3	P22001	575 aa		27.7	■■■□□ 2.02
UGP2-223	ENST00000493222	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.7	■■■□□ 2.02
UGP2-223	ENST00000493222	GPBP1L1	Q9HC44	474 aa	Predicted RBP	27.7	■■■□□ 2.02
UGP2-223	ENST00000493222	BCOR	Q6W2J9	1755 aa		27.7	■■■□□ 2.02
UGP2-223	ENST00000493222	NFIX	Q14938	502 aa		27.69	■■■□□ 2.02
UGP2-223	ENST00000493222	ZNF526	Q8TF50	670 aa	Predicted RBP	27.69	■■■□□ 2.02
UGP2-223	ENST00000493222	RTF1	Q92541	710 aa	Known RBP	27.69	■■■□□ 2.02
UGP2-223	ENST00000493222	SENP3-EIF4A1	A0A087X0R7	540 aa		27.68	■■■□□ 2.02
UGP2-223	ENST00000493222	EIF5	P55010	431 aa	Known RBP	27.68	■■■□□ 2.02
UGP2-223	ENST00000493222	BCL2L12	Q9HB09	334 aa		27.68	■■■□□ 2.02
UGP2-223	ENST00000493222	MCM10	Q7L590	875 aa		27.67	■■■□□ 2.02
UGP2-223	ENST00000493222	PIM2	Q9P1W9	311 aa		27.67	■■■□□ 2.02
UGP2-223	ENST00000493222		A0A087WZG4	1122 aa		27.66	■■■□□ 2.02
UGP2-223	ENST00000493222	KCNQ3	O43525	872 aa		27.66	■■■□□ 2.02
UGP2-223	ENST00000493222	CHRNA5	P30532	468 aa		27.66	■■■□□ 2.02
UGP2-223	ENST00000493222	ARHGAP27	Q6ZUM4	889 aa		27.66	■■■□□ 2.02
UGP2-223	ENST00000493222	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.66	■■■□□ 2.02
UGP2-223	ENST00000493222	LAMB4	A4D0S4	1761 aa		27.65	■■■□□ 2.02
UGP2-223	ENST00000493222	DALRD3	Q5D0E6	543 aa	Known RBP	27.64	■■■□□ 2.02
UGP2-223	ENST00000493222	ANKRD31	Q8N7Z5	1873 aa		27.64	■■■□□ 2.01
UGP2-223	ENST00000493222	IL6ST	P40189	918 aa	Predicted RBP	27.63	■■■□□ 2.01
UGP2-223	ENST00000493222	KDM3B	Q7LBC6	1761 aa		27.63	■■■□□ 2.01
UGP2-223	ENST00000493222	SERPINB2	P05120	415 aa		27.62	■■■□□ 2.01
UGP2-223	ENST00000493222	DCTN1	Q14203	1278 aa		27.62	■■■□□ 2.01
UGP2-223	ENST00000493222	HTATSF1	O43719	755 aa	Known RBP	27.61	■■■□□ 2.01
UGP2-223	ENST00000493222	A1BG	P04217	495 aa		27.61	■■■□□ 2.01
UGP2-223	ENST00000493222	BICDL1	Q6ZP65	573 aa		27.61	■■■□□ 2.01
UGP2-223	ENST00000493222	CARMIL3	Q8ND23	1372 aa		27.6	■■■□□ 2.01
UGP2-223	ENST00000493222	SBF1	O95248	1867 aa		27.6	■■■□□ 2.01
UGP2-223	ENST00000493222	NEFM	P07197	916 aa		27.6	■■■□□ 2.01
UGP2-223	ENST00000493222	TBC1D2B	Q9UPU7	963 aa		27.6	■■■□□ 2.01
UGP2-223	ENST00000493222	COL11A2	P13942	1736 aa	Predicted RBP	27.59	■■■□□ 2.01
UGP2-223	ENST00000493222	NPM2	Q86SE8	214 aa	Known RBP	27.59	■■■□□ 2.01
UGP2-223	ENST00000493222	TBC1D9B	Q66K14	1250 aa		27.58	■■■□□ 2.01
UGP2-223	ENST00000493222	PRAMEF22	A3QJZ6	481 aa		27.57	■■■□□ 2
UGP2-223	ENST00000493222	USP16	Q9Y5T5	823 aa		27.56	■■■□□ 2
UGP2-223	ENST00000493222	SNRPA1	P09661	255 aa	Known RBP	27.55	■■■□□ 2
UGP2-223	ENST00000493222	PIP4K2A	P48426	406 aa	Predicted RBP	27.54	■■■□□ 2
UGP2-223	ENST00000493222	CACNA1S	Q13698	1873 aa		27.54	■■■□□ 2
UGP2-223	ENST00000493222	CAMTA2	O94983	1202 aa		27.53	■■■□□ 2
UGP2-223	ENST00000493222	TAF7	Q15545	349 aa	Predicted RBP	27.53	■■■□□ 2
UGP2-223	ENST00000493222	C9orf131	Q5VYM1	1079 aa		27.53	■■■□□ 2
UGP2-223	ENST00000493222	DZIP3	Q86Y13	1208 aa	Known RBP	27.53	■■■□□ 2
UGP2-223	ENST00000493222	PLEKHF1	Q96S99	279 aa		27.53	■■■□□ 2
UGP2-223	ENST00000493222	C2CD5	Q86YS7	1000 aa		27.52	■■■□□ 2
UGP2-223	ENST00000493222	MAPK8IP3	Q9UPT6	1336 aa		27.51	■■□□□ 1.99
UGP2-223	ENST00000493222	CCDC88A	Q3V6T2	1871 aa		27.51	■■□□□ 1.99
UGP2-223	ENST00000493222	TIAM2	Q8IVF5	1701 aa		27.5	■■□□□ 1.99
UGP2-223	ENST00000493222	KIF3C	O14782	793 aa		27.5	■■□□□ 1.99
UGP2-223	ENST00000493222	NFE2L2	Q16236	605 aa		27.5	■■□□□ 1.99
UGP2-223	ENST00000493222		H0YIN7	160 aa		27.49	■■□□□ 1.99
UGP2-223	ENST00000493222	RALBP1	Q15311	655 aa		27.49	■■□□□ 1.99
UGP2-223	ENST00000493222	PRR5L	Q6MZQ0	368 aa		27.49	■■□□□ 1.99
UGP2-223	ENST00000493222	SETDB2	Q96T68	719 aa		27.49	■■□□□ 1.99
UGP2-223	ENST00000493222	PNN	Q9H307	717 aa	Known RBP	27.49	■■□□□ 1.99
UGP2-223	ENST00000493222	MIS18A	Q9NYP9	233 aa		27.49	■■□□□ 1.99
UGP2-223	ENST00000493222	RNF181	Q9P0P0	153 aa		27.49	■■□□□ 1.99
UGP2-223	ENST00000493222	ARFGEF2	Q9Y6D5	1785 aa		27.49	■■□□□ 1.99
UGP2-223	ENST00000493222	TTLL6	Q8N841	843 aa		27.48	■■□□□ 1.99
UGP2-223	ENST00000493222	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.48	■■□□□ 1.99
UGP2-223	ENST00000493222	CEP350	Q5VT06	3117 aa		27.47	■■□□□ 1.99
UGP2-223	ENST00000493222	NPHP1	O15259	732 aa		27.47	■■□□□ 1.99
UGP2-223	ENST00000493222	CNBD1	Q8NA66	436 aa		27.47	■■□□□ 1.99
UGP2-223	ENST00000493222	PDE6B	P35913	854 aa		27.46	■■□□□ 1.99
UGP2-223	ENST00000493222	RASSF7	Q02833	373 aa		27.46	■■□□□ 1.99
UGP2-223	ENST00000493222	CCDC24	Q8N4L8	307 aa		27.46	■■□□□ 1.99
UGP2-223	ENST00000493222	PNISR	Q8TF01	805 aa	Known RBP	27.46	■■□□□ 1.99
UGP2-223	ENST00000493222	BRIP1	Q9BX63	1249 aa		27.46	■■□□□ 1.99
UGP2-223	ENST00000493222	NBPF26	B4DH59	902 aa		27.45	■■□□□ 1.98
UGP2-223	ENST00000493222	DDX10	Q13206	875 aa	Known RBP	27.45	■■□□□ 1.98
UGP2-223	ENST00000493222	NBPF10	Q6P3W6	841 aa	Known RBP	27.45	■■□□□ 1.98
UGP2-223	ENST00000493222	NBPF15	Q8N660	670 aa		27.45	■■□□□ 1.98
UGP2-223	ENST00000493222	THUMPD2	Q9BTF0	503 aa	Known RBP	27.45	■■□□□ 1.98
UGP2-223	ENST00000493222	ZNF652	Q9Y2D9	606 aa		27.45	■■□□□ 1.98
UGP2-223	ENST00000493222	PDZRN3	Q9UPQ7	1066 aa		27.44	■■□□□ 1.98
UGP2-223	ENST00000493222	FER1L6	Q2WGJ9	1857 aa		27.44	■■□□□ 1.98
UGP2-223	ENST00000493222	ST5	P78524	1137 aa		27.43	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 421.3 ms