RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
ATG3-206ENST00000492886 ZNF496Q96IT1 587 aaPredicted RBP18.85■□□□□ 0.61
ATG3-206ENST00000492886 ZBTB1Q9Y2K1 713 aa18.85■□□□□ 0.61
ATG3-206ENST00000492886 BCORQ6W2J9 1755 aa18.84■□□□□ 0.61
ATG3-206ENST00000492886 PARP3Q9Y6F1 533 aa18.84■□□□□ 0.61
ATG3-206ENST00000492886 KCNA3P22001 575 aa18.83■□□□□ 0.6
ATG3-206ENST00000492886 TEFQ10587 303 aa18.83■□□□□ 0.6
ATG3-206ENST00000492886 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
ATG3-206ENST00000492886 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.6
ATG3-206ENST00000492886 POLRMTO00411 1230 aaKnown RBP18.82■□□□□ 0.6
ATG3-206ENST00000492886 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
ATG3-206ENST00000492886 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
ATG3-206ENST00000492886 USPL1Q5W0Q7 1092 aa18.82■□□□□ 0.6
ATG3-206ENST00000492886 TTC5Q8N0Z6 440 aa18.82■□□□□ 0.6
ATG3-206ENST00000492886 BCL2L12Q9HB09 334 aa18.82■□□□□ 0.6
ATG3-206ENST00000492886 EIF5P55010 431 aaKnown RBP18.81■□□□□ 0.6
ATG3-206ENST00000492886 ATP10DQ9P241 1426 aa18.81■□□□□ 0.6
ATG3-206ENST00000492886 ANKRD31Q8N7Z5 1873 aa18.8■□□□□ 0.6
ATG3-206ENST00000492886 A0A0G2JLW4 131 aa18.8■□□□□ 0.6
ATG3-206ENST00000492886 DPEP1P16444 411 aa18.8■□□□□ 0.6
ATG3-206ENST00000492886 TEX13AQ9BXU3 409 aaPredicted RBP18.8■□□□□ 0.6
ATG3-206ENST00000492886 LAMB4A4D0S4 1761 aa18.8■□□□□ 0.6
ATG3-206ENST00000492886 HTATSF1O43719 755 aaKnown RBP18.79■□□□□ 0.6
ATG3-206ENST00000492886 ZPR1O75312 459 aa18.79■□□□□ 0.6
ATG3-206ENST00000492886 STARD3NLO95772 234 aa18.79■□□□□ 0.6
ATG3-206ENST00000492886 WWC3Q9ULE0 1092 aa18.79■□□□□ 0.6
ATG3-206ENST00000492886 SBF1O95248 1867 aa18.79■□□□□ 0.6
ATG3-206ENST00000492886 KCNQ3O43525 872 aa18.78■□□□□ 0.6
ATG3-206ENST00000492886 FMNL2Q96PY5 1086 aa18.78■□□□□ 0.6
ATG3-206ENST00000492886 NFIXQ14938 502 aa18.77■□□□□ 0.6
ATG3-206ENST00000492886 PLEKHF1Q96S99 279 aa18.77■□□□□ 0.6
ATG3-206ENST00000492886 BTBD11A6QL63 1104 aa18.76■□□□□ 0.59
ATG3-206ENST00000492886 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
ATG3-206ENST00000492886 C1QTNF8P60827 252 aa18.76■□□□□ 0.59
ATG3-206ENST00000492886 IL6STP40189 918 aaPredicted RBP18.75■□□□□ 0.59
ATG3-206ENST00000492886 MCM10Q7L590 875 aa18.75■□□□□ 0.59
ATG3-206ENST00000492886 A0A087WZG4 1122 aa18.74■□□□□ 0.59
ATG3-206ENST00000492886 BCS1LQ9Y276 419 aa18.74■□□□□ 0.59
ATG3-206ENST00000492886 COL11A2P13942 1736 aaPredicted RBP18.74■□□□□ 0.59
ATG3-206ENST00000492886 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
ATG3-206ENST00000492886 GIGYF1O75420 1035 aaPredicted RBP18.72■□□□□ 0.59
ATG3-206ENST00000492886 A1BGP04217 495 aa18.72■□□□□ 0.59
ATG3-206ENST00000492886 RTF1Q92541 710 aaKnown RBP18.72■□□□□ 0.59
ATG3-206ENST00000492886 PIM2Q9P1W9 311 aa18.72■□□□□ 0.59
ATG3-206ENST00000492886 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
ATG3-206ENST00000492886 CARMIL3Q8ND23 1372 aa18.71■□□□□ 0.59
ATG3-206ENST00000492886 ARFGEF2Q9Y6D5 1785 aa18.71■□□□□ 0.59
ATG3-206ENST00000492886 SERPINB2P05120 415 aa18.71■□□□□ 0.59
ATG3-206ENST00000492886 CHRNA5P30532 468 aa18.71■□□□□ 0.59
ATG3-206ENST00000492886 PRAMEF22A3QJZ6 481 aa18.7■□□□□ 0.58
ATG3-206ENST00000492886 RALBP1Q15311 655 aa18.7■□□□□ 0.58
ATG3-206ENST00000492886 CCDC88AQ3V6T2 1871 aa18.7■□□□□ 0.58
ATG3-206ENST00000492886 CAMTA2O94983 1202 aa18.69■□□□□ 0.58
ATG3-206ENST00000492886 SNRPA1P09661 255 aaKnown RBP18.69■□□□□ 0.58
ATG3-206ENST00000492886 TAF7Q15545 349 aaPredicted RBP18.69■□□□□ 0.58
ATG3-206ENST00000492886 TBC1D9BQ66K14 1250 aa18.69■□□□□ 0.58
ATG3-206ENST00000492886 DALRD3Q5D0E6 543 aaKnown RBP18.68■□□□□ 0.58
ATG3-206ENST00000492886 TBC1D2BQ9UPU7 963 aa18.68■□□□□ 0.58
ATG3-206ENST00000492886 NFE2L2Q16236 605 aa18.67■□□□□ 0.58
ATG3-206ENST00000492886 GPBP1L1Q9HC44 474 aaPredicted RBP18.67■□□□□ 0.58
ATG3-206ENST00000492886 NUP98P52948 1817 aa18.67■□□□□ 0.58
ATG3-206ENST00000492886 CACNA1SQ13698 1873 aa18.67■□□□□ 0.58
ATG3-206ENST00000492886 FER1L6Q2WGJ9 1857 aa18.67■□□□□ 0.58
ATG3-206ENST00000492886 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
ATG3-206ENST00000492886 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
ATG3-206ENST00000492886 ARHGAP27Q6ZUM4 889 aa18.66■□□□□ 0.58
ATG3-206ENST00000492886 NBPF15Q8N660 670 aa18.66■□□□□ 0.58
ATG3-206ENST00000492886 DICER1Q9UPY3 1922 aaKnown RBP18.65■□□□□ 0.58
ATG3-206ENST00000492886 RGL2O15211 777 aa18.65■□□□□ 0.58
ATG3-206ENST00000492886 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
ATG3-206ENST00000492886 DDX10Q13206 875 aaKnown RBP18.64■□□□□ 0.57
ATG3-206ENST00000492886 PRR5LQ6MZQ0 368 aa18.64■□□□□ 0.57
ATG3-206ENST00000492886 BICDL1Q6ZP65 573 aa18.64■□□□□ 0.57
ATG3-206ENST00000492886 DZIP3Q86Y13 1208 aaKnown RBP18.64■□□□□ 0.57
ATG3-206ENST00000492886 PNNQ9H307 717 aaKnown RBP18.64■□□□□ 0.57
ATG3-206ENST00000492886 KIF3CO14782 793 aa18.63■□□□□ 0.57
ATG3-206ENST00000492886 NEFMP07197 916 aa18.63■□□□□ 0.57
ATG3-206ENST00000492886 CLEC4GQ6UXB4 293 aa18.63■□□□□ 0.57
ATG3-206ENST00000492886 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
ATG3-206ENST00000492886 MIS18AQ9NYP9 233 aa18.63■□□□□ 0.57
ATG3-206ENST00000492886 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
ATG3-206ENST00000492886 TNRC6CQ9HCJ0 1690 aaKnown RBP18.63■□□□□ 0.57
ATG3-206ENST00000492886 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
ATG3-206ENST00000492886 EIF4A1P60842 406 aaKnown RBP18.62■□□□□ 0.57
ATG3-206ENST00000492886 BRIP1Q9BX63 1249 aa18.62■□□□□ 0.57
ATG3-206ENST00000492886 ZNF330Q9Y3S2 320 aaPredicted RBP18.62■□□□□ 0.57
ATG3-206ENST00000492886 SLX4Q8IY92 1834 aa18.61■□□□□ 0.57
ATG3-206ENST00000492886 ZNF526Q8TF50 670 aaPredicted RBP18.61■□□□□ 0.57
ATG3-206ENST00000492886 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
ATG3-206ENST00000492886 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
ATG3-206ENST00000492886 MAPK8IP3Q9UPT6 1336 aa18.6■□□□□ 0.57
ATG3-206ENST00000492886 C9orf131Q5VYM1 1079 aa18.6■□□□□ 0.57
ATG3-206ENST00000492886 C2CD5Q86YS7 1000 aa18.6■□□□□ 0.57
ATG3-206ENST00000492886 TTLL6Q8N841 843 aa18.6■□□□□ 0.57
ATG3-206ENST00000492886 SETDB2Q96T68 719 aa18.6■□□□□ 0.57
ATG3-206ENST00000492886 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
ATG3-206ENST00000492886 H0YIN7 160 aa18.59■□□□□ 0.57
ATG3-206ENST00000492886 PRELPP51888 382 aa18.59■□□□□ 0.57
ATG3-206ENST00000492886 PDE6BP35913 854 aa18.58■□□□□ 0.56
ATG3-206ENST00000492886 NPM2Q86SE8 214 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms