RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 DDB1Q16531 1140 aa6.59□□□□□ -1.35
UBR4-215ENST00000492606 SP7Q8TDD2 431 aaPredicted RBP6.59□□□□□ -1.35
UBR4-215ENST00000492606 BEGAINQ9BUH8 593 aa6.59□□□□□ -1.35
UBR4-215ENST00000492606 THRAP3Q9Y2W1 955 aaKnown RBP6.59□□□□□ -1.35
UBR4-215ENST00000492606 PCDHGA4Q9Y5G9 962 aa6.59□□□□□ -1.35
UBR4-215ENST00000492606 TRPM3Q9HCF6 1732 aaPredicted RBP6.59□□□□□ -1.36
UBR4-215ENST00000492606 NAIPQ13075 1403 aa6.59□□□□□ -1.36
UBR4-215ENST00000492606 SPATA31E1Q6ZUB1 1445 aa6.59□□□□□ -1.36
UBR4-215ENST00000492606 ALS2Q96Q42 1657 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 BTAF1O14981 1849 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 PHF14O94880 888 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 TSPY4P0CV99 314 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 TSPY10P0CW01 314 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 RSPH4AQ5TD94 716 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 C3orf67Q6ZVT6 689 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 ERICH6Q7L0X2 663 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 PHOX2BQ99453 314 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 TMUB1Q9BVT8 246 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 HIRIP3Q9BW71 556 aaPredicted RBP6.58□□□□□ -1.36
UBR4-215ENST00000492606 NHSQ6T4R5 1651 aa6.58□□□□□ -1.36
UBR4-215ENST00000492606 MUC3AQ02505 3323 aa6.57□□□□□ -1.36
UBR4-215ENST00000492606 ERBB4Q15303 1308 aa6.57□□□□□ -1.36
UBR4-215ENST00000492606 TSR1Q2NL82 804 aaKnown RBP6.57□□□□□ -1.36
UBR4-215ENST00000492606 SMIM5Q71RC9 77 aa6.57□□□□□ -1.36
UBR4-215ENST00000492606 COL18A1P39060 1754 aa6.57□□□□□ -1.36
UBR4-215ENST00000492606 GLTPD2A6NH11 291 aa6.56□□□□□ -1.36
UBR4-215ENST00000492606 OTUD5Q96G74 571 aa6.56□□□□□ -1.36
UBR4-215ENST00000492606 ACSBG1Q96GR2 724 aa6.56□□□□□ -1.36
UBR4-215ENST00000492606 LAMA2P24043 3122 aaKnown RBP6.55□□□□□ -1.36
UBR4-215ENST00000492606 HOXB3P14651 431 aaPredicted RBP6.55□□□□□ -1.36
UBR4-215ENST00000492606 ZC3H6P61129 1189 aaKnown RBP6.55□□□□□ -1.36
UBR4-215ENST00000492606 EPAS1Q99814 870 aa6.55□□□□□ -1.36
UBR4-215ENST00000492606 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.55□□□□□ -1.36
UBR4-215ENST00000492606 BRCA1P38398 1863 aaKnown RBP6.55□□□□□ -1.36
UBR4-215ENST00000492606 KANK1Q14678 1352 aa6.55□□□□□ -1.36
UBR4-215ENST00000492606 PIK3C2AO00443 1686 aa6.55□□□□□ -1.36
UBR4-215ENST00000492606 NRXN1Q9ULB1 1477 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 A0A0G2JLW4 131 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 AOC2O75106 756 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 ITGBL1O95965 494 aaPredicted RBP6.54□□□□□ -1.36
UBR4-215ENST00000492606 MS4A1P11836 297 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 CCDC24Q8N4L8 307 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 SLAIN1Q8ND83 568 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 GPR101Q96P66 508 aaPredicted RBP6.54□□□□□ -1.36
UBR4-215ENST00000492606 ARFGEF1Q9Y6D6 1849 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 TRPM1Q7Z4N2 1603 aa6.54□□□□□ -1.36
UBR4-215ENST00000492606 SYNGAP1Q96PV0 1343 aa6.53□□□□□ -1.36
UBR4-215ENST00000492606 CASKIN1Q8WXD9 1431 aa6.53□□□□□ -1.36
UBR4-215ENST00000492606 LMO7Q8WWI1 1683 aa6.53□□□□□ -1.36
UBR4-215ENST00000492606 LAMA3Q16787 3333 aa6.53□□□□□ -1.36
UBR4-215ENST00000492606 FOSBP53539 338 aa6.53□□□□□ -1.36
UBR4-215ENST00000492606 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.53□□□□□ -1.36
UBR4-215ENST00000492606 KHSRPQ92945 711 aaKnown RBP eCLIP6.53□□□□□ -1.36
UBR4-215ENST00000492606 WNK3Q9BYP7 1800 aa6.53□□□□□ -1.36
UBR4-215ENST00000492606 ZNF316A6NFI3 1004 aaPredicted RBP6.52□□□□□ -1.37
UBR4-215ENST00000492606 GRM1Q13255 1194 aa6.52□□□□□ -1.37
UBR4-215ENST00000492606 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
UBR4-215ENST00000492606 TTC13Q8NBP0 860 aa6.52□□□□□ -1.37
UBR4-215ENST00000492606 HPS5Q9UPZ3 1129 aa6.52□□□□□ -1.37
UBR4-215ENST00000492606 KAT6BQ8WYB5 2073 aa6.52□□□□□ -1.37
UBR4-215ENST00000492606 KIF13BQ9NQT8 1826 aa6.52□□□□□ -1.37
UBR4-215ENST00000492606 IQGAP3Q86VI3 1631 aa6.51□□□□□ -1.37
UBR4-215ENST00000492606 TYW1BQ6NUM6 668 aa6.51□□□□□ -1.37
UBR4-215ENST00000492606 GPR153Q6NV75 609 aa6.51□□□□□ -1.37
UBR4-215ENST00000492606 GIGYF2Q6Y7W6 1299 aaKnown RBP6.51□□□□□ -1.37
UBR4-215ENST00000492606 USP6P35125 1406 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 USP54Q70EL1 1684 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 SOX1O00570 391 aaPredicted RBP6.5□□□□□ -1.37
UBR4-215ENST00000492606 PPEF1O14829 653 aaPredicted RBP6.5□□□□□ -1.37
UBR4-215ENST00000492606 MAP3K7O43318 606 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 DPEP1P16444 411 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 SLC27A3Q5K4L6 730 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 C6orf132Q5T0Z8 1188 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 RBM27Q9P2N5 1060 aaKnown RBP6.5□□□□□ -1.37
UBR4-215ENST00000492606 CHD8Q9HCK8 2581 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 KDM6AO15550 1401 aaPredicted RBP6.5□□□□□ -1.37
UBR4-215ENST00000492606 ERBINQ96RT1 1412 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 ERBB3P21860 1342 aa6.5□□□□□ -1.37
UBR4-215ENST00000492606 CA12O43570 354 aa6.49□□□□□ -1.37
UBR4-215ENST00000492606 WAPLQ7Z5K2 1190 aa6.49□□□□□ -1.37
UBR4-215ENST00000492606 DDRGK1Q96HY6 314 aa6.49□□□□□ -1.37
UBR4-215ENST00000492606 IGSF5Q9NSI5 407 aa6.49□□□□□ -1.37
UBR4-215ENST00000492606 DAXXQ9UER7 740 aaPredicted RBP6.49□□□□□ -1.37
UBR4-215ENST00000492606 ABT1Q9ULW3 272 aaKnown RBP6.49□□□□□ -1.37
UBR4-215ENST00000492606 CCDC88AQ3V6T2 1871 aa6.49□□□□□ -1.37
UBR4-215ENST00000492606 CRB1P82279 1406 aa6.49□□□□□ -1.37
UBR4-215ENST00000492606 ZC3H4Q9UPT8 1303 aaKnown RBP6.49□□□□□ -1.37
UBR4-215ENST00000492606 COL5A2P05997 1499 aaPredicted RBP6.48□□□□□ -1.37
UBR4-215ENST00000492606 TIAM2Q8IVF5 1701 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 CLTCL1P53675 1640 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 NUDT7P0C024 238 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 KCNA3P22001 575 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 RASSF7Q02833 373 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 MAP3K12Q12852 859 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 ARSIQ5FYB1 569 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 FBXW7Q969H0 707 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 DCAF5Q96JK2 942 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 ADAM33Q9BZ11 813 aa6.48□□□□□ -1.37
UBR4-215ENST00000492606 GOPCQ9HD26 462 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms