RNA–Protein interactions for RNA: ENST00000491445.1

NCBP1-204, Transcript of nuclear cap binding protein subunit 1, humanhuman

TSL 3

Gene NCBP1, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-204ENST00000491445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.06□□□□□ -0.8
NCBP1-204ENST00000491445 CD163L1Q9NR16 1453 aa10.05□□□□□ -0.8
NCBP1-204ENST00000491445 FOXN1O15353 648 aa10.05□□□□□ -0.8
NCBP1-204ENST00000491445 VEGFAP15692 232 aaPredicted RBP10.05□□□□□ -0.8
NCBP1-204ENST00000491445 DPEP1P16444 411 aa10.05□□□□□ -0.8
NCBP1-204ENST00000491445 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
NCBP1-204ENST00000491445 NME9Q86XW9 330 aa10.05□□□□□ -0.8
NCBP1-204ENST00000491445 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
NCBP1-204ENST00000491445 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
NCBP1-204ENST00000491445 SBF1O95248 1867 aa10.04□□□□□ -0.8
NCBP1-204ENST00000491445 PHF14O94880 888 aa10.04□□□□□ -0.8
NCBP1-204ENST00000491445 CTCFP49711 727 aaPredicted RBP10.04□□□□□ -0.8
NCBP1-204ENST00000491445 CCDC87Q9NVE4 849 aa10.04□□□□□ -0.8
NCBP1-204ENST00000491445 RNF181Q9P0P0 153 aa10.04□□□□□ -0.8
NCBP1-204ENST00000491445 EDC4Q6P2E9 1401 aaKnown RBP10.04□□□□□ -0.8
NCBP1-204ENST00000491445 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
NCBP1-204ENST00000491445 RAB3GAP2Q9H2M9 1393 aa10.03□□□□□ -0.8
NCBP1-204ENST00000491445 GLTPD2A6NH11 291 aa10.03□□□□□ -0.8
NCBP1-204ENST00000491445 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
NCBP1-204ENST00000491445 PCDH11XQ9BZA7 1347 aa10.03□□□□□ -0.8
NCBP1-204ENST00000491445 PCDH11YQ9BZA8 1340 aa10.03□□□□□ -0.8
NCBP1-204ENST00000491445 LOC102724428A0A0B4J2F2 783 aa10.02□□□□□ -0.81
NCBP1-204ENST00000491445 HOXC9P31274 260 aa10.02□□□□□ -0.81
NCBP1-204ENST00000491445 SIK1P57059 783 aa10.02□□□□□ -0.81
NCBP1-204ENST00000491445 MLLT1Q03111 559 aaPredicted RBP10.02□□□□□ -0.81
NCBP1-204ENST00000491445 SMIM5Q71RC9 77 aa10.02□□□□□ -0.81
NCBP1-204ENST00000491445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.02□□□□□ -0.81
NCBP1-204ENST00000491445 LINC00116Q8NCU8 138 aa10.02□□□□□ -0.81
NCBP1-204ENST00000491445 ABHD8Q96I13 439 aa10.02□□□□□ -0.81
NCBP1-204ENST00000491445 MAP3K19Q56UN5 1328 aa10.02□□□□□ -0.81
NCBP1-204ENST00000491445 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
NCBP1-204ENST00000491445 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
NCBP1-204ENST00000491445 ITGB4P16144 1822 aa10.01□□□□□ -0.81
NCBP1-204ENST00000491445 TMF1P82094 1093 aa10.01□□□□□ -0.81
NCBP1-204ENST00000491445 DALRD3Q5D0E6 543 aaKnown RBP10.01□□□□□ -0.81
NCBP1-204ENST00000491445 MPRIPQ6WCQ1 1025 aa10.01□□□□□ -0.81
NCBP1-204ENST00000491445 ZNF831Q5JPB2 1677 aa10□□□□□ -0.81
NCBP1-204ENST00000491445 GNPATO15228 680 aa10□□□□□ -0.81
NCBP1-204ENST00000491445 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
NCBP1-204ENST00000491445 RAPGEF4Q8WZA2 1011 aa10□□□□□ -0.81
NCBP1-204ENST00000491445 LTV1Q96GA3 475 aaPredicted RBP10□□□□□ -0.81
NCBP1-204ENST00000491445 WBP1LQ9NX94 342 aa10□□□□□ -0.81
NCBP1-204ENST00000491445 RGPD2P0DJD1 1756 aa10□□□□□ -0.81
NCBP1-204ENST00000491445 POTECB2RU33 542 aa9.99□□□□□ -0.81
NCBP1-204ENST00000491445 CYP27B1O15528 508 aa9.99□□□□□ -0.81
NCBP1-204ENST00000491445 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
NCBP1-204ENST00000491445 PIGBQ92521 554 aa9.99□□□□□ -0.81
NCBP1-204ENST00000491445 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
NCBP1-204ENST00000491445 GYS1P13807 737 aa9.98□□□□□ -0.81
NCBP1-204ENST00000491445 TATP17735 454 aaPredicted RBP9.98□□□□□ -0.81
NCBP1-204ENST00000491445 LMNB1P20700 586 aa9.98□□□□□ -0.81
NCBP1-204ENST00000491445 ITPK1Q13572 414 aa9.98□□□□□ -0.81
NCBP1-204ENST00000491445 TRAPPC3LQ5T215 181 aa9.98□□□□□ -0.81
NCBP1-204ENST00000491445 RC3H1Q5TC82 1133 aaKnown RBP9.98□□□□□ -0.81
NCBP1-204ENST00000491445 HDGFL2Q7Z4V5 671 aaPredicted RBP9.98□□□□□ -0.81
NCBP1-204ENST00000491445 AIDAQ96BJ3 306 aa9.98□□□□□ -0.81
NCBP1-204ENST00000491445 MKRN1Q9UHC7 482 aaKnown RBP9.98□□□□□ -0.81
NCBP1-204ENST00000491445 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
NCBP1-204ENST00000491445 SMG6Q86US8 1419 aaKnown RBP9.98□□□□□ -0.81
NCBP1-204ENST00000491445 PUS7Q96PZ0 661 aaKnown RBP9.97□□□□□ -0.81
NCBP1-204ENST00000491445 RTCBQ9Y3I0 505 aaKnown RBP9.97□□□□□ -0.81
NCBP1-204ENST00000491445 VIRMAQ69YN4 1812 aaKnown RBP9.97□□□□□ -0.81
NCBP1-204ENST00000491445 KDRP35968 1356 aa9.97□□□□□ -0.81
NCBP1-204ENST00000491445 AMPHP49418 695 aa9.96□□□□□ -0.82
NCBP1-204ENST00000491445 LBX1P52954 281 aa9.96□□□□□ -0.82
NCBP1-204ENST00000491445 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
NCBP1-204ENST00000491445 NCAPD2Q15021 1401 aa9.96□□□□□ -0.82
NCBP1-204ENST00000491445 HSPA8P11142 646 aaKnown RBP9.95□□□□□ -0.82
NCBP1-204ENST00000491445 ATP6V1AP38606 617 aa9.95□□□□□ -0.82
NCBP1-204ENST00000491445 TERF2IPQ9NYB0 399 aa9.95□□□□□ -0.82
NCBP1-204ENST00000491445 PASKQ96RG2 1323 aa9.95□□□□□ -0.82
NCBP1-204ENST00000491445 CNTNAP4Q9C0A0 1308 aa9.95□□□□□ -0.82
NCBP1-204ENST00000491445 A0A1W2PP64 1363 aa9.95□□□□□ -0.82
NCBP1-204ENST00000491445 KIF24Q5T7B8 1368 aa9.95□□□□□ -0.82
NCBP1-204ENST00000491445 TIAM2Q8IVF5 1701 aa9.94□□□□□ -0.82
NCBP1-204ENST00000491445 G3V3G9 751 aa9.94□□□□□ -0.82
NCBP1-204ENST00000491445 RPS6KA4O75676 772 aa9.94□□□□□ -0.82
NCBP1-204ENST00000491445 COL5A3P25940 1745 aaPredicted RBP9.93□□□□□ -0.82
NCBP1-204ENST00000491445 INSRP06213 1382 aa9.93□□□□□ -0.82
NCBP1-204ENST00000491445 VEGFBP49765 207 aa9.93□□□□□ -0.82
NCBP1-204ENST00000491445 DPY19L2Q6NUT2 758 aa9.93□□□□□ -0.82
NCBP1-204ENST00000491445 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
NCBP1-204ENST00000491445 COG3Q96JB2 828 aa9.93□□□□□ -0.82
NCBP1-204ENST00000491445 SLC12A5Q9H2X9 1139 aa9.93□□□□□ -0.82
NCBP1-204ENST00000491445 ASAP1Q9ULH1 1129 aa9.93□□□□□ -0.82
NCBP1-204ENST00000491445 RFC4P35249 363 aa9.92□□□□□ -0.82
NCBP1-204ENST00000491445 MAP2K1Q02750 393 aaPredicted RBP9.92□□□□□ -0.82
NCBP1-204ENST00000491445 RASSF7Q02833 373 aa9.92□□□□□ -0.82
NCBP1-204ENST00000491445 USHBP1Q8N6Y0 703 aa9.92□□□□□ -0.82
NCBP1-204ENST00000491445 ATG3Q9NT62 314 aa9.92□□□□□ -0.82
NCBP1-204ENST00000491445 TMOD3Q9NYL9 352 aa9.92□□□□□ -0.82
NCBP1-204ENST00000491445 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
NCBP1-204ENST00000491445 RASSF10A6NK89 507 aa9.91□□□□□ -0.82
NCBP1-204ENST00000491445 TMEM88BA6NKF7 163 aa9.91□□□□□ -0.82
NCBP1-204ENST00000491445 CHRNA5P30532 468 aa9.91□□□□□ -0.82
NCBP1-204ENST00000491445 DDR1Q08345 913 aa9.91□□□□□ -0.82
NCBP1-204ENST00000491445 BOLA1Q9Y3E2 137 aa9.91□□□□□ -0.82
NCBP1-204ENST00000491445 THSD7BQ9C0I4 1608 aa9.9□□□□□ -0.82
NCBP1-204ENST00000491445 USP42Q9H9J4 1324 aaKnown RBP9.9□□□□□ -0.82
NCBP1-204ENST00000491445 CCDC85CA6NKD9 419 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms