RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 KIAA1551Q9HCM1 1747 aa26.2■■□□□ 1.79
SMC4-222ENST00000490207 PNNQ9H307 717 aaKnown RBP26.2■■□□□ 1.78
SMC4-222ENST00000490207 STARD3NLO95772 234 aa26.19■■□□□ 1.78
SMC4-222ENST00000490207 KDM3BQ7LBC6 1761 aa26.19■■□□□ 1.78
SMC4-222ENST00000490207 C10orf71Q711Q0 1435 aa26.19■■□□□ 1.78
SMC4-222ENST00000490207 UTRNP46939 3433 aa26.19■■□□□ 1.78
SMC4-222ENST00000490207 KCNQ3O43525 872 aa26.18■■□□□ 1.78
SMC4-222ENST00000490207 SCN7AQ01118 1682 aa26.18■■□□□ 1.78
SMC4-222ENST00000490207 NFE2L2Q16236 605 aa26.17■■□□□ 1.78
SMC4-222ENST00000490207 TEX13AQ9BXU3 409 aaPredicted RBP26.17■■□□□ 1.78
SMC4-222ENST00000490207 N4BP2Q86UW6 1770 aaPredicted RBP26.17■■□□□ 1.78
SMC4-222ENST00000490207 LAMB4A4D0S4 1761 aa26.16■■□□□ 1.78
SMC4-222ENST00000490207 ZPR1O75312 459 aa26.16■■□□□ 1.78
SMC4-222ENST00000490207 FKBP8Q14318 412 aa26.16■■□□□ 1.78
SMC4-222ENST00000490207 PARP3Q9Y6F1 533 aa26.16■■□□□ 1.78
SMC4-222ENST00000490207 YBX3P16989 372 aaKnown RBP eCLIP26.15■■□□□ 1.78
SMC4-222ENST00000490207 CANXP27824 592 aaKnown RBP26.15■■□□□ 1.78
SMC4-222ENST00000490207 GOLGB1Q14789 3259 aaKnown RBP26.14■■□□□ 1.78
SMC4-222ENST00000490207 USPL1Q5W0Q7 1092 aa26.14■■□□□ 1.78
SMC4-222ENST00000490207 PXDNLA1KZ92 1463 aa26.14■■□□□ 1.78
SMC4-222ENST00000490207 PRKRIP1Q9H875 184 aaPredicted RBP26.13■■□□□ 1.77
SMC4-222ENST00000490207 NARFQ9UHQ1 456 aa26.13■■□□□ 1.77
SMC4-222ENST00000490207 AFDNP55196 1824 aaKnown RBP26.11■■□□□ 1.77
SMC4-222ENST00000490207 BCORQ6W2J9 1755 aa26.11■■□□□ 1.77
SMC4-222ENST00000490207 TAF7Q15545 349 aaPredicted RBP26.11■■□□□ 1.77
SMC4-222ENST00000490207 GRIN3BO60391 1043 aa26.1■■□□□ 1.77
SMC4-222ENST00000490207 EIF5P55010 431 aaKnown RBP26.1■■□□□ 1.77
SMC4-222ENST00000490207 DDR1Q08345 913 aa26.1■■□□□ 1.77
SMC4-222ENST00000490207 BRCA1P38398 1863 aaKnown RBP26.1■■□□□ 1.77
SMC4-222ENST00000490207 NRXN2Q9P2S2 1712 aa26.09■■□□□ 1.77
SMC4-222ENST00000490207 A0A087WZG4 1122 aa26.09■■□□□ 1.77
SMC4-222ENST00000490207 WDR43Q15061 677 aaKnown RBP eCLIP26.08■■□□□ 1.77
SMC4-222ENST00000490207 WWC3Q9ULE0 1092 aa26.08■■□□□ 1.77
SMC4-222ENST00000490207 ZNF330Q9Y3S2 320 aaPredicted RBP26.08■■□□□ 1.77
SMC4-222ENST00000490207 SNRPA1P09661 255 aaKnown RBP26.07■■□□□ 1.76
SMC4-222ENST00000490207 IL6STP40189 918 aaPredicted RBP26.07■■□□□ 1.76
SMC4-222ENST00000490207 THUMPD2Q9BTF0 503 aaKnown RBP26.07■■□□□ 1.76
SMC4-222ENST00000490207 PRAMEF22A3QJZ6 481 aa26.06■■□□□ 1.76
SMC4-222ENST00000490207 POLRMTO00411 1230 aaKnown RBP26.06■■□□□ 1.76
SMC4-222ENST00000490207 A1BGP04217 495 aa26.06■■□□□ 1.76
SMC4-222ENST00000490207 TM4SF1P30408 202 aa26.06■■□□□ 1.76
SMC4-222ENST00000490207 TGFB2P61812 414 aa26.06■■□□□ 1.76
SMC4-222ENST00000490207 PNISRQ8TF01 805 aaKnown RBP26.06■■□□□ 1.76
SMC4-222ENST00000490207 BCL2L12Q9HB09 334 aa26.06■■□□□ 1.76
SMC4-222ENST00000490207 MIS18AQ9NYP9 233 aa26.06■■□□□ 1.76
SMC4-222ENST00000490207 USP16Q9Y5T5 823 aa26.05■■□□□ 1.76
SMC4-222ENST00000490207 RIPK4P57078 832 aa26.04■■□□□ 1.76
SMC4-222ENST00000490207 NPM2Q86SE8 214 aaKnown RBP26.04■■□□□ 1.76
SMC4-222ENST00000490207 CCDC146Q8IYE0 955 aa26.04■■□□□ 1.76
SMC4-222ENST00000490207 NFIXQ14938 502 aa26.03■■□□□ 1.76
SMC4-222ENST00000490207 TMPOP42166 694 aaKnown RBP26.02■■□□□ 1.76
SMC4-222ENST00000490207 A0A0G2JLW4 131 aa26.01■■□□□ 1.75
SMC4-222ENST00000490207 DPEP1P16444 411 aa26.01■■□□□ 1.75
SMC4-222ENST00000490207 PIP4K2AP48426 406 aaPredicted RBP26.01■■□□□ 1.75
SMC4-222ENST00000490207 LMOD3Q0VAK6 560 aa26.01■■□□□ 1.75
SMC4-222ENST00000490207 TBC1D2BQ9UPU7 963 aa26.01■■□□□ 1.75
SMC4-222ENST00000490207 ARFGEF1Q9Y6D6 1849 aa26■■□□□ 1.75
SMC4-222ENST00000490207 RUNDC1Q96C34 613 aa26■■□□□ 1.75
SMC4-222ENST00000490207 DLEC1Q9Y238 1755 aa26■■□□□ 1.75
SMC4-222ENST00000490207 RRP7AQ9Y3A4 280 aaKnown RBP25.99■■□□□ 1.75
SMC4-222ENST00000490207 ZNF316A6NFI3 1004 aaPredicted RBP25.98■■□□□ 1.75
SMC4-222ENST00000490207 BICDL1Q6ZP65 573 aa25.98■■□□□ 1.75
SMC4-222ENST00000490207 DZIP3Q86Y13 1208 aaKnown RBP25.98■■□□□ 1.75
SMC4-222ENST00000490207 ZNF784Q8NCA9 323 aaPredicted RBP25.98■■□□□ 1.75
SMC4-222ENST00000490207 ADAMTS8Q9UP79 889 aa25.98■■□□□ 1.75
SMC4-222ENST00000490207 CAMTA2O94983 1202 aa25.97■■□□□ 1.75
SMC4-222ENST00000490207 SERPINB2P05120 415 aa25.97■■□□□ 1.75
SMC4-222ENST00000490207 EIF4A1P60842 406 aaKnown RBP25.97■■□□□ 1.75
SMC4-222ENST00000490207 BCS1LQ9Y276 419 aa25.97■■□□□ 1.75
SMC4-222ENST00000490207 NEUROD2Q15784 382 aa25.96■■□□□ 1.75
SMC4-222ENST00000490207 TBC1D9BQ66K14 1250 aa25.96■■□□□ 1.75
SMC4-222ENST00000490207 TSPYL4Q9UJ04 414 aa25.96■■□□□ 1.75
SMC4-222ENST00000490207 ANKRD31Q8N7Z5 1873 aa25.96■■□□□ 1.75
SMC4-222ENST00000490207 CARMIL3Q8ND23 1372 aa25.95■■□□□ 1.74
SMC4-222ENST00000490207 NBPF26B4DH59 902 aa25.94■■□□□ 1.74
SMC4-222ENST00000490207 GIGYF1O75420 1035 aaPredicted RBP25.94■■□□□ 1.74
SMC4-222ENST00000490207 NBPF10Q6P3W6 841 aaKnown RBP25.94■■□□□ 1.74
SMC4-222ENST00000490207 NBPF15Q8N660 670 aa25.94■■□□□ 1.74
SMC4-222ENST00000490207 KCNA3P22001 575 aa25.93■■□□□ 1.74
SMC4-222ENST00000490207 CHRNA5P30532 468 aa25.92■■□□□ 1.74
SMC4-222ENST00000490207 PIM2Q9P1W9 311 aa25.92■■□□□ 1.74
SMC4-222ENST00000490207 BABAM1Q9NWV8 329 aa25.91■■□□□ 1.74
SMC4-222ENST00000490207 COL11A2P13942 1736 aaPredicted RBP25.91■■□□□ 1.74
SMC4-222ENST00000490207 TRIM35Q9UPQ4 493 aa25.9■■□□□ 1.74
SMC4-222ENST00000490207 ZNF652Q9Y2D9 606 aa25.89■■□□□ 1.74
SMC4-222ENST00000490207 ADCY9O60503 1353 aa25.88■■□□□ 1.73
SMC4-222ENST00000490207 DALRD3Q5D0E6 543 aaKnown RBP25.88■■□□□ 1.73
SMC4-222ENST00000490207 SETDB2Q96T68 719 aa25.88■■□□□ 1.73
SMC4-222ENST00000490207 NUP98P52948 1817 aa25.87■■□□□ 1.73
SMC4-222ENST00000490207 PRR5LQ6MZQ0 368 aa25.87■■□□□ 1.73
SMC4-222ENST00000490207 CLEC4GQ6UXB4 293 aa25.87■■□□□ 1.73
SMC4-222ENST00000490207 ATP10DQ9P241 1426 aa25.87■■□□□ 1.73
SMC4-222ENST00000490207 RGL2O15211 777 aa25.85■■□□□ 1.73
SMC4-222ENST00000490207 CNBD1Q8NA66 436 aa25.85■■□□□ 1.73
SMC4-222ENST00000490207 ERBB4Q15303 1308 aa25.85■■□□□ 1.73
SMC4-222ENST00000490207 NPHP1O15259 732 aa25.84■■□□□ 1.73
SMC4-222ENST00000490207 C2CD5Q86YS7 1000 aa25.84■■□□□ 1.73
SMC4-222ENST00000490207 MYL6BP14649 208 aa25.83■■□□□ 1.73
SMC4-222ENST00000490207 CCDC184Q52MB2 194 aa25.83■■□□□ 1.73
SMC4-222ENST00000490207 ARHGAP27Q6ZUM4 889 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms