RNA–Protein interactions for RNA: ENST00000489764.1

SLC6A9-208, Transcript of solute carrier family 6 member 9, humanhuman

TSL 3

Gene SLC6A9, Length 930 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9-208ENST00000489764 PIM2Q9P1W9 311 aa25■■□□□ 1.59
SLC6A9-208ENST00000489764 BCL2L12Q9HB09 334 aa24.99■■□□□ 1.59
SLC6A9-208ENST00000489764 CANXP27824 592 aaKnown RBP24.97■■□□□ 1.59
SLC6A9-208ENST00000489764 CHRNA5P30532 468 aa24.97■■□□□ 1.59
SLC6A9-208ENST00000489764 TEFQ10587 303 aa24.97■■□□□ 1.59
SLC6A9-208ENST00000489764 NFIXQ14938 502 aa24.97■■□□□ 1.59
SLC6A9-208ENST00000489764 ZNF790Q6PG37 636 aa24.97■■□□□ 1.59
SLC6A9-208ENST00000489764 TTC5Q8N0Z6 440 aa24.97■■□□□ 1.59
SLC6A9-208ENST00000489764 ZNF496Q96IT1 587 aaPredicted RBP24.97■■□□□ 1.59
SLC6A9-208ENST00000489764 COL15A1P39059 1388 aa24.96■■□□□ 1.59
SLC6A9-208ENST00000489764 STARD3NLO95772 234 aa24.96■■□□□ 1.59
SLC6A9-208ENST00000489764 CFAP53Q96M91 514 aa24.96■■□□□ 1.59
SLC6A9-208ENST00000489764 RSPH6AQ9H0K4 717 aa24.96■■□□□ 1.59
SLC6A9-208ENST00000489764 PRKAR2BP31323 418 aa24.95■■□□□ 1.58
SLC6A9-208ENST00000489764 EIF5P55010 431 aaKnown RBP24.95■■□□□ 1.58
SLC6A9-208ENST00000489764 DALRD3Q5D0E6 543 aaKnown RBP24.95■■□□□ 1.58
SLC6A9-208ENST00000489764 CEP350Q5VT06 3117 aa24.95■■□□□ 1.58
SLC6A9-208ENST00000489764 KIF3CO14782 793 aa24.94■■□□□ 1.58
SLC6A9-208ENST00000489764 PPP2R1AP30153 589 aa24.94■■□□□ 1.58
SLC6A9-208ENST00000489764 VIRMAQ69YN4 1812 aaKnown RBP24.93■■□□□ 1.58
SLC6A9-208ENST00000489764 TEX13AQ9BXU3 409 aaPredicted RBP24.92■■□□□ 1.58
SLC6A9-208ENST00000489764 NUDCQ9Y266 331 aa24.92■■□□□ 1.58
SLC6A9-208ENST00000489764 CEMIPQ8WUJ3 1361 aa24.92■■□□□ 1.58
SLC6A9-208ENST00000489764 HEG1Q9ULI3 1381 aa24.92■■□□□ 1.58
SLC6A9-208ENST00000489764 KCNQ3O43525 872 aa24.91■■□□□ 1.58
SLC6A9-208ENST00000489764 SERPINB2P05120 415 aa24.91■■□□□ 1.58
SLC6A9-208ENST00000489764 C9orf131Q5VYM1 1079 aa24.9■■□□□ 1.58
SLC6A9-208ENST00000489764 UBR2Q8IWV8 1755 aa24.9■■□□□ 1.58
SLC6A9-208ENST00000489764 BRCA1P38398 1863 aaKnown RBP24.89■■□□□ 1.58
SLC6A9-208ENST00000489764 A0A087WZG4 1122 aa24.89■■□□□ 1.58
SLC6A9-208ENST00000489764 U2AF1L5P0DN76 240 aaPredicted RBP24.89■■□□□ 1.58
SLC6A9-208ENST00000489764 U2AF1Q01081 240 aaKnown RBP eCLIP24.89■■□□□ 1.58
SLC6A9-208ENST00000489764 FMNL2Q96PY5 1086 aa24.89■■□□□ 1.58
SLC6A9-208ENST00000489764 BTBD11A6QL63 1104 aa24.88■■□□□ 1.57
SLC6A9-208ENST00000489764 A1BGP04217 495 aa24.87■■□□□ 1.57
SLC6A9-208ENST00000489764 HSPA6P17066 643 aa24.87■■□□□ 1.57
SLC6A9-208ENST00000489764 BICDL1Q6ZP65 573 aa24.86■■□□□ 1.57
SLC6A9-208ENST00000489764 TBC1D2BQ9UPU7 963 aa24.86■■□□□ 1.57
SLC6A9-208ENST00000489764 IL6STP40189 918 aaPredicted RBP24.85■■□□□ 1.57
SLC6A9-208ENST00000489764 TBC1D9BQ66K14 1250 aa24.85■■□□□ 1.57
SLC6A9-208ENST00000489764 MCM10Q7L590 875 aa24.84■■□□□ 1.57
SLC6A9-208ENST00000489764 NMRK2Q9NPI5 230 aa24.84■■□□□ 1.57
SLC6A9-208ENST00000489764 ZNF330Q9Y3S2 320 aaPredicted RBP24.83■■□□□ 1.57
SLC6A9-208ENST00000489764 USP16Q9Y5T5 823 aa24.83■■□□□ 1.57
SLC6A9-208ENST00000489764 ARFGEF1Q9Y6D6 1849 aa24.83■■□□□ 1.57
SLC6A9-208ENST00000489764 SIPA1L3O60292 1781 aaPredicted RBP24.82■■□□□ 1.56
SLC6A9-208ENST00000489764 C2CD5Q86YS7 1000 aa24.82■■□□□ 1.56
SLC6A9-208ENST00000489764 RTF1Q92541 710 aaKnown RBP24.82■■□□□ 1.56
SLC6A9-208ENST00000489764 NRXN2Q9P2S2 1712 aa24.81■■□□□ 1.56
SLC6A9-208ENST00000489764 DCTN1Q14203 1278 aa24.81■■□□□ 1.56
SLC6A9-208ENST00000489764 RNF181Q9P0P0 153 aa24.81■■□□□ 1.56
SLC6A9-208ENST00000489764 AFDNP55196 1824 aaKnown RBP24.81■■□□□ 1.56
SLC6A9-208ENST00000489764 CARMIL3Q8ND23 1372 aa24.8■■□□□ 1.56
SLC6A9-208ENST00000489764 PRAMEF22A3QJZ6 481 aa24.8■■□□□ 1.56
SLC6A9-208ENST00000489764 H0YIN7 160 aa24.8■■□□□ 1.56
SLC6A9-208ENST00000489764 TOMM70O94826 608 aa24.8■■□□□ 1.56
SLC6A9-208ENST00000489764 TTLL6Q8N841 843 aa24.8■■□□□ 1.56
SLC6A9-208ENST00000489764 HTATSF1O43719 755 aaKnown RBP24.79■■□□□ 1.56
SLC6A9-208ENST00000489764 CAMTA2O94983 1202 aa24.79■■□□□ 1.56
SLC6A9-208ENST00000489764 PIP4K2AP48426 406 aaPredicted RBP24.77■■□□□ 1.56
SLC6A9-208ENST00000489764 RASSF7Q02833 373 aa24.77■■□□□ 1.56
SLC6A9-208ENST00000489764 PRR5LQ6MZQ0 368 aa24.77■■□□□ 1.56
SLC6A9-208ENST00000489764 CCDC24Q8N4L8 307 aa24.77■■□□□ 1.56
SLC6A9-208ENST00000489764 BRIP1Q9BX63 1249 aa24.77■■□□□ 1.56
SLC6A9-208ENST00000489764 SNRPA1P09661 255 aaKnown RBP24.76■■□□□ 1.55
SLC6A9-208ENST00000489764 PRELPP51888 382 aa24.76■■□□□ 1.55
SLC6A9-208ENST00000489764 NPM2Q86SE8 214 aaKnown RBP24.76■■□□□ 1.55
SLC6A9-208ENST00000489764 DZIP3Q86Y13 1208 aaKnown RBP24.75■■□□□ 1.55
SLC6A9-208ENST00000489764 SETDB2Q96T68 719 aa24.75■■□□□ 1.55
SLC6A9-208ENST00000489764 PDE6BP35913 854 aa24.74■■□□□ 1.55
SLC6A9-208ENST00000489764 TAF7Q15545 349 aaPredicted RBP24.74■■□□□ 1.55
SLC6A9-208ENST00000489764 KDM2BQ8NHM5 1336 aa24.73■■□□□ 1.55
SLC6A9-208ENST00000489764 ZNF622Q969S3 477 aaKnown RBP eCLIP24.73■■□□□ 1.55
SLC6A9-208ENST00000489764 RRAGCQ9HB90 399 aa24.73■■□□□ 1.55
SLC6A9-208ENST00000489764 MIS18AQ9NYP9 233 aa24.73■■□□□ 1.55
SLC6A9-208ENST00000489764 PDZRN3Q9UPQ7 1066 aa24.73■■□□□ 1.55
SLC6A9-208ENST00000489764 NBPF26B4DH59 902 aa24.72■■□□□ 1.55
SLC6A9-208ENST00000489764 LMNB1P20700 586 aa24.72■■□□□ 1.55
SLC6A9-208ENST00000489764 NBPF10Q6P3W6 841 aaKnown RBP24.72■■□□□ 1.55
SLC6A9-208ENST00000489764 NBPF15Q8N660 670 aa24.72■■□□□ 1.55
SLC6A9-208ENST00000489764 RBM46Q8TBY0 533 aaKnown RBP24.71■■□□□ 1.55
SLC6A9-208ENST00000489764 PLEKHF1Q96S99 279 aa24.71■■□□□ 1.55
SLC6A9-208ENST00000489764 NFKBIEO00221 500 aa24.7■■□□□ 1.54
SLC6A9-208ENST00000489764 CLEC4GQ6UXB4 293 aa24.7■■□□□ 1.54
SLC6A9-208ENST00000489764 SBF1O95248 1867 aa24.7■■□□□ 1.54
SLC6A9-208ENST00000489764 APLP1P51693 650 aa24.69■■□□□ 1.54
SLC6A9-208ENST00000489764 CNBD1Q8NA66 436 aa24.69■■□□□ 1.54
SLC6A9-208ENST00000489764 SCN7AQ01118 1682 aa24.69■■□□□ 1.54
SLC6A9-208ENST00000489764 C16orf71Q8IYS4 520 aaPredicted RBP24.68■■□□□ 1.54
SLC6A9-208ENST00000489764 ZC3H4Q9UPT8 1303 aaKnown RBP24.67■■□□□ 1.54
SLC6A9-208ENST00000489764 C21orf2O43822 256 aa24.67■■□□□ 1.54
SLC6A9-208ENST00000489764 ZNF219Q9P2Y4 722 aaPredicted RBP24.67■■□□□ 1.54
SLC6A9-208ENST00000489764 DLEC1Q9Y238 1755 aa24.67■■□□□ 1.54
SLC6A9-208ENST00000489764 DNAJC5GQ8N7S2 189 aa24.66■■□□□ 1.54
SLC6A9-208ENST00000489764 ANKRD31Q8N7Z5 1873 aa24.66■■□□□ 1.54
SLC6A9-208ENST00000489764 GLTPD2A6NH11 291 aa24.65■■□□□ 1.54
SLC6A9-208ENST00000489764 NPHP1O15259 732 aa24.65■■□□□ 1.54
SLC6A9-208ENST00000489764 NEFMP07197 916 aa24.65■■□□□ 1.54
SLC6A9-208ENST00000489764 SRGNP10124 158 aa24.65■■□□□ 1.54
SLC6A9-208ENST00000489764 ST5P78524 1137 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms