RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 COL23A1Q86Y22 540 aaPredicted RBP14.47□□□□□ -0.09
CPSF7-212ENST00000489728 CFAP44Q96MT7 982 aa14.47□□□□□ -0.09
CPSF7-212ENST00000489728 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
CPSF7-212ENST00000489728 C4AP0C0L4 1744 aa14.46□□□□□ -0.09
CPSF7-212ENST00000489728 IL16Q14005 1332 aa14.46□□□□□ -0.09
CPSF7-212ENST00000489728 GNAI1P63096 354 aa14.46□□□□□ -0.09
CPSF7-212ENST00000489728 PDGFDQ9GZP0 370 aaPredicted RBP14.46□□□□□ -0.09
CPSF7-212ENST00000489728 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-212ENST00000489728 ZNF853P0CG23 659 aa14.45□□□□□ -0.1
CPSF7-212ENST00000489728 TRAPPC3LQ5T215 181 aa14.45□□□□□ -0.1
CPSF7-212ENST00000489728 WWC1Q8IX03 1113 aa14.45□□□□□ -0.1
CPSF7-212ENST00000489728 GIGYF1O75420 1035 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-212ENST00000489728 PHF14O94880 888 aa14.44□□□□□ -0.1
CPSF7-212ENST00000489728 HOXB7P09629 217 aa14.44□□□□□ -0.1
CPSF7-212ENST00000489728 AMIGO3Q86WK7 504 aa14.44□□□□□ -0.1
CPSF7-212ENST00000489728 MIS18AQ9NYP9 233 aa14.44□□□□□ -0.1
CPSF7-212ENST00000489728 SRCAPQ6ZRS2 3230 aa14.44□□□□□ -0.1
CPSF7-212ENST00000489728 COL15A1P39059 1388 aa14.44□□□□□ -0.1
CPSF7-212ENST00000489728 ERBB4Q15303 1308 aa14.43□□□□□ -0.1
CPSF7-212ENST00000489728 A0A087WZG4 1122 aa14.43□□□□□ -0.1
CPSF7-212ENST00000489728 MSH5O43196 834 aa14.43□□□□□ -0.1
CPSF7-212ENST00000489728 ZBTB7AO95365 584 aa14.43□□□□□ -0.1
CPSF7-212ENST00000489728 IL6STP40189 918 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-212ENST00000489728 WDR63Q8IWG1 891 aa14.43□□□□□ -0.1
CPSF7-212ENST00000489728 SGIP1Q9BQI5 828 aa14.43□□□□□ -0.1
CPSF7-212ENST00000489728 ZBTB1Q9Y2K1 713 aa14.43□□□□□ -0.1
CPSF7-212ENST00000489728 RFC4P35249 363 aa14.42□□□□□ -0.1
CPSF7-212ENST00000489728 PTGER2P43116 358 aa14.42□□□□□ -0.1
CPSF7-212ENST00000489728 EIF5P55010 431 aaKnown RBP14.42□□□□□ -0.1
CPSF7-212ENST00000489728 MIER1Q8N108 512 aa14.42□□□□□ -0.1
CPSF7-212ENST00000489728 ARHGEF1Q92888 912 aaKnown RBP14.42□□□□□ -0.1
CPSF7-212ENST00000489728 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
CPSF7-212ENST00000489728 RGL2O15211 777 aa14.41□□□□□ -0.1
CPSF7-212ENST00000489728 POLD1P28340 1107 aa14.41□□□□□ -0.1
CPSF7-212ENST00000489728 CHMP4AQ9BY43 222 aa14.41□□□□□ -0.1
CPSF7-212ENST00000489728 USP16Q9Y5T5 823 aa14.41□□□□□ -0.1
CPSF7-212ENST00000489728 SCN7AQ01118 1682 aa14.41□□□□□ -0.1
CPSF7-212ENST00000489728 NPM2Q86SE8 214 aaKnown RBP14.4□□□□□ -0.1
CPSF7-212ENST00000489728 NLGN1Q8N2Q7 840 aa14.4□□□□□ -0.1
CPSF7-212ENST00000489728 MBIPQ9NS73 344 aa14.4□□□□□ -0.1
CPSF7-212ENST00000489728 LAS1LQ9Y4W2 734 aaKnown RBP14.4□□□□□ -0.1
CPSF7-212ENST00000489728 ZPR1O75312 459 aa14.39□□□□□ -0.11
CPSF7-212ENST00000489728 A1BGP04217 495 aa14.39□□□□□ -0.11
CPSF7-212ENST00000489728 GYS1P13807 737 aa14.39□□□□□ -0.11
CPSF7-212ENST00000489728 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
CPSF7-212ENST00000489728 NARFQ9UHQ1 456 aa14.39□□□□□ -0.11
CPSF7-212ENST00000489728 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
CPSF7-212ENST00000489728 BCORQ6W2J9 1755 aa14.39□□□□□ -0.11
CPSF7-212ENST00000489728 ZNF521Q96K83 1311 aa14.39□□□□□ -0.11
CPSF7-212ENST00000489728 PRAMEF22A3QJZ6 481 aa14.38□□□□□ -0.11
CPSF7-212ENST00000489728 PPP1R1BQ9UD71 204 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-212ENST00000489728 ARXQ96QS3 562 aa14.37□□□□□ -0.11
CPSF7-212ENST00000489728 NBPF26B4DH59 902 aa14.36□□□□□ -0.11
CPSF7-212ENST00000489728 NBPF10Q6P3W6 841 aaKnown RBP14.36□□□□□ -0.11
CPSF7-212ENST00000489728 SMIM5Q71RC9 77 aa14.36□□□□□ -0.11
CPSF7-212ENST00000489728 NBPF15Q8N660 670 aa14.36□□□□□ -0.11
CPSF7-212ENST00000489728 MYH16Q9H6N6 1097 aa14.36□□□□□ -0.11
CPSF7-212ENST00000489728 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
CPSF7-212ENST00000489728 HDGFL1Q5TGJ6 251 aa14.34□□□□□ -0.11
CPSF7-212ENST00000489728 DUSP27Q5VZP5 1158 aa14.34□□□□□ -0.11
CPSF7-212ENST00000489728 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
CPSF7-212ENST00000489728 CLEC4GQ6UXB4 293 aa14.34□□□□□ -0.11
CPSF7-212ENST00000489728 DZIP3Q86Y13 1208 aaKnown RBP14.34□□□□□ -0.11
CPSF7-212ENST00000489728 DDX21Q9NR30 783 aaKnown RBP eCLIP14.34□□□□□ -0.11
CPSF7-212ENST00000489728 SRP68Q9UHB9 627 aaKnown RBP14.34□□□□□ -0.11
CPSF7-212ENST00000489728 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
CPSF7-212ENST00000489728 FANCIQ9NVI1 1328 aa14.34□□□□□ -0.11
CPSF7-212ENST00000489728 CAMTA2O94983 1202 aa14.33□□□□□ -0.12
CPSF7-212ENST00000489728 MMP10P09238 476 aa14.33□□□□□ -0.12
CPSF7-212ENST00000489728 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
CPSF7-212ENST00000489728 DBF4Q9UBU7 674 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-212ENST00000489728 ZNF330Q9Y3S2 320 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-212ENST00000489728 KIF13BQ9NQT8 1826 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 ERVV-1B6SEH8 477 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 EIF2S2P20042 333 aaKnown RBP14.32□□□□□ -0.12
CPSF7-212ENST00000489728 TM4SF1P30408 202 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 FKBP8Q14318 412 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 PDIA6Q15084 440 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 KRT24Q2M2I5 525 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 LRP10Q7Z4F1 713 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 TSR2Q969E8 191 aaKnown RBP14.32□□□□□ -0.12
CPSF7-212ENST00000489728 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-212ENST00000489728 CD2APQ9Y5K6 639 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 NRXN2Q9P2S2 1712 aa14.32□□□□□ -0.12
CPSF7-212ENST00000489728 E9PSI1 815 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 KIF6Q6ZMV9 814 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 C8orf58Q8NAV2 365 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 BCL2L12Q9HB09 334 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 HYPKQ9NX55 129 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 TBC1D2BQ9UPU7 963 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 PARP3Q9Y6F1 533 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 C10orf71Q711Q0 1435 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
CPSF7-212ENST00000489728 PIP4K2AP48426 406 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-212ENST00000489728 CCDC30Q5VVM6 783 aa14.3□□□□□ -0.12
CPSF7-212ENST00000489728 FHDC1Q9C0D6 1143 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-212ENST00000489728 MAP3K15Q6ZN16 1313 aa14.3□□□□□ -0.12
CPSF7-212ENST00000489728 CARMIL3Q8ND23 1372 aa14.3□□□□□ -0.12
CPSF7-212ENST00000489728 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
CPSF7-212ENST00000489728 POLRMTO00411 1230 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms