RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 USPL1Q5W0Q7 1092 aa23.57■■□□□ 1.36
ABCF3-217ENST00000489719 A0A087WZG4 1122 aa23.56■■□□□ 1.36
ABCF3-217ENST00000489719 NARFQ9UHQ1 456 aa23.56■■□□□ 1.36
ABCF3-217ENST00000489719 PNISRQ8TF01 805 aaKnown RBP23.55■■□□□ 1.36
ABCF3-217ENST00000489719 PRKRIP1Q9H875 184 aaPredicted RBP23.55■■□□□ 1.36
ABCF3-217ENST00000489719 COL5A3P25940 1745 aaPredicted RBP23.54■■□□□ 1.36
ABCF3-217ENST00000489719 SNRPA1P09661 255 aaKnown RBP23.54■■□□□ 1.36
ABCF3-217ENST00000489719 TGFB2P61812 414 aa23.54■■□□□ 1.36
ABCF3-217ENST00000489719 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
ABCF3-217ENST00000489719 A1BGP04217 495 aa23.53■■□□□ 1.36
ABCF3-217ENST00000489719 YBX3P16989 372 aaKnown RBP eCLIP23.53■■□□□ 1.369e-8■■■□□ 15.1
ABCF3-217ENST00000489719 EIF5P55010 431 aaKnown RBP23.53■■□□□ 1.36
ABCF3-217ENST00000489719 MIS18AQ9NYP9 233 aa23.53■■□□□ 1.36
ABCF3-217ENST00000489719 ZNF330Q9Y3S2 320 aaPredicted RBP23.53■■□□□ 1.36
ABCF3-217ENST00000489719 COL15A1P39059 1388 aa23.52■■□□□ 1.36
ABCF3-217ENST00000489719 TM4SF1P30408 202 aa23.52■■□□□ 1.36
ABCF3-217ENST00000489719 RIPK4P57078 832 aa23.52■■□□□ 1.36
ABCF3-217ENST00000489719 USP16Q9Y5T5 823 aa23.52■■□□□ 1.36
ABCF3-217ENST00000489719 MYH14Q7Z406 1995 aaKnown RBP23.52■■□□□ 1.36
ABCF3-217ENST00000489719 TJP1Q07157 1748 aa23.51■■□□□ 1.35
ABCF3-217ENST00000489719 IL6STP40189 918 aaPredicted RBP23.51■■□□□ 1.35
ABCF3-217ENST00000489719 WWC3Q9ULE0 1092 aa23.5■■□□□ 1.35
ABCF3-217ENST00000489719 A0A0G2JLW4 131 aa23.49■■□□□ 1.35
ABCF3-217ENST00000489719 THUMPD2Q9BTF0 503 aaKnown RBP23.49■■□□□ 1.35
ABCF3-217ENST00000489719 CICQ96RK0 1608 aaPredicted RBP23.48■■□□□ 1.35
ABCF3-217ENST00000489719 DDR1Q08345 913 aa23.48■■□□□ 1.35
ABCF3-217ENST00000489719 TBC1D2BQ9UPU7 963 aa23.48■■□□□ 1.35
ABCF3-217ENST00000489719 PRAMEF22A3QJZ6 481 aa23.47■■□□□ 1.35
ABCF3-217ENST00000489719 ZNF316A6NFI3 1004 aaPredicted RBP23.47■■□□□ 1.35
ABCF3-217ENST00000489719 POLRMTO00411 1230 aaKnown RBP23.47■■□□□ 1.35
ABCF3-217ENST00000489719 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
ABCF3-217ENST00000489719 LMOD3Q0VAK6 560 aa23.47■■□□□ 1.35
ABCF3-217ENST00000489719 NFIXQ14938 502 aa23.47■■□□□ 1.35
ABCF3-217ENST00000489719 CCDC146Q8IYE0 955 aa23.47■■□□□ 1.35
ABCF3-217ENST00000489719 RUNDC1Q96C34 613 aa23.46■■□□□ 1.35
ABCF3-217ENST00000489719 BCL2L12Q9HB09 334 aa23.46■■□□□ 1.35
ABCF3-217ENST00000489719 ADAMTS8Q9UP79 889 aa23.46■■□□□ 1.35
ABCF3-217ENST00000489719 DPEP1P16444 411 aa23.45■■□□□ 1.34
ABCF3-217ENST00000489719 NEUROD2Q15784 382 aa23.45■■□□□ 1.34
ABCF3-217ENST00000489719 BICDL1Q6ZP65 573 aa23.45■■□□□ 1.34
ABCF3-217ENST00000489719 SERPINB2P05120 415 aa23.44■■□□□ 1.34
ABCF3-217ENST00000489719 VIRMAQ69YN4 1812 aaKnown RBP23.44■■□□□ 1.34
ABCF3-217ENST00000489719 BCS1LQ9Y276 419 aa23.43■■□□□ 1.34
ABCF3-217ENST00000489719 RRP7AQ9Y3A4 280 aaKnown RBP23.43■■□□□ 1.34
ABCF3-217ENST00000489719 UBR2Q8IWV8 1755 aa23.42■■□□□ 1.34
ABCF3-217ENST00000489719 PIP4K2AP48426 406 aaPredicted RBP23.42■■□□□ 1.34
ABCF3-217ENST00000489719 EIF4A1P60842 406 aaKnown RBP23.42■■□□□ 1.34
ABCF3-217ENST00000489719 DZIP3Q86Y13 1208 aaKnown RBP23.42■■□□□ 1.34
ABCF3-217ENST00000489719 ZNF784Q8NCA9 323 aaPredicted RBP23.42■■□□□ 1.34
ABCF3-217ENST00000489719 TSPYL4Q9UJ04 414 aa23.42■■□□□ 1.34
ABCF3-217ENST00000489719 C10orf71Q711Q0 1435 aa23.42■■□□□ 1.34
ABCF3-217ENST00000489719 GIGYF1O75420 1035 aaPredicted RBP23.41■■□□□ 1.34
ABCF3-217ENST00000489719 PIM2Q9P1W9 311 aa23.41■■□□□ 1.34
ABCF3-217ENST00000489719 SIPA1L3O60292 1781 aaPredicted RBP23.41■■□□□ 1.34
ABCF3-217ENST00000489719 TBC1D9BQ66K14 1250 aa23.4■■□□□ 1.34
ABCF3-217ENST00000489719 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
ABCF3-217ENST00000489719 CAMTA2O94983 1202 aa23.39■■□□□ 1.33
ABCF3-217ENST00000489719 SETDB2Q96T68 719 aa23.39■■□□□ 1.33
ABCF3-217ENST00000489719 C4AP0C0L4 1744 aa23.39■■□□□ 1.33
ABCF3-217ENST00000489719 PXDNLA1KZ92 1463 aa23.38■■□□□ 1.33
ABCF3-217ENST00000489719 KCNA3P22001 575 aa23.38■■□□□ 1.33
ABCF3-217ENST00000489719 NBPF26B4DH59 902 aa23.37■■□□□ 1.33
ABCF3-217ENST00000489719 NBPF10Q6P3W6 841 aaKnown RBP23.37■■□□□ 1.33
ABCF3-217ENST00000489719 NBPF15Q8N660 670 aa23.37■■□□□ 1.33
ABCF3-217ENST00000489719 UTRNP46939 3433 aa23.36■■□□□ 1.33
ABCF3-217ENST00000489719 NPHP1O15259 732 aa23.36■■□□□ 1.33
ABCF3-217ENST00000489719 CHRNA5P30532 468 aa23.36■■□□□ 1.33
ABCF3-217ENST00000489719 DALRD3Q5D0E6 543 aaKnown RBP23.36■■□□□ 1.33
ABCF3-217ENST00000489719 CLEC4GQ6UXB4 293 aa23.36■■□□□ 1.33
ABCF3-217ENST00000489719 ARHGAP27Q6ZUM4 889 aa23.36■■□□□ 1.33
ABCF3-217ENST00000489719 ZNF652Q9Y2D9 606 aa23.36■■□□□ 1.33
ABCF3-217ENST00000489719 NGEFQ8N5V2 710 aa23.35■■□□□ 1.33
ABCF3-217ENST00000489719 LAS1LQ9Y4W2 734 aaKnown RBP23.35■■□□□ 1.33
ABCF3-217ENST00000489719 ANP32CO43423 234 aa23.34■■□□□ 1.33
ABCF3-217ENST00000489719 TRIM35Q9UPQ4 493 aa23.33■■□□□ 1.33
ABCF3-217ENST00000489719 H0YIN7 160 aa23.32■■□□□ 1.32
ABCF3-217ENST00000489719 C2CD5Q86YS7 1000 aa23.32■■□□□ 1.32
ABCF3-217ENST00000489719 CARMIL3Q8ND23 1372 aa23.31■■□□□ 1.32
ABCF3-217ENST00000489719 MYL6BP14649 208 aa23.31■■□□□ 1.32
ABCF3-217ENST00000489719 EIF2S2P20042 333 aaKnown RBP23.31■■□□□ 1.32
ABCF3-217ENST00000489719 BRIP1Q9BX63 1249 aa23.31■■□□□ 1.32
ABCF3-217ENST00000489719 PDZRN3Q9UPQ7 1066 aa23.31■■□□□ 1.32
ABCF3-217ENST00000489719 GOLGB1Q14789 3259 aaKnown RBP23.3■■□□□ 1.32
ABCF3-217ENST00000489719 CHL1O00533 1208 aa23.3■■□□□ 1.32
ABCF3-217ENST00000489719 APAF1O14727 1248 aa23.3■■□□□ 1.32
ABCF3-217ENST00000489719 RGL2O15211 777 aa23.3■■□□□ 1.32
ABCF3-217ENST00000489719 PDE6BP35913 854 aa23.3■■□□□ 1.32
ABCF3-217ENST00000489719 ST5P78524 1137 aa23.29■■□□□ 1.32
ABCF3-217ENST00000489719 PRR5LQ6MZQ0 368 aa23.29■■□□□ 1.32
ABCF3-217ENST00000489719 CNBD1Q8NA66 436 aa23.29■■□□□ 1.32
ABCF3-217ENST00000489719 NIP7Q9Y221 180 aaKnown RBP eCLIP23.29■■□□□ 1.32
ABCF3-217ENST00000489719 CHD4Q14839 1912 aa23.28■■□□□ 1.32
ABCF3-217ENST00000489719 KIF6Q6ZMV9 814 aa23.28■■□□□ 1.32
ABCF3-217ENST00000489719 NBPF5PQ86XG9 351 aaPredicted RBP23.28■■□□□ 1.32
ABCF3-217ENST00000489719 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
ABCF3-217ENST00000489719 DLG5Q8TDM6 1919 aa23.27■■□□□ 1.32
ABCF3-217ENST00000489719 ERVV-1B6SEH8 477 aa23.27■■□□□ 1.32
ABCF3-217ENST00000489719 TPTE2Q6XPS3 522 aa23.27■■□□□ 1.32
ABCF3-217ENST00000489719 TTLL6Q8N841 843 aa23.27■■□□□ 1.32
ABCF3-217ENST00000489719 ERBB4Q15303 1308 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms