RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 C8orf58Q8NAV2 365 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 AK7Q96M32 723 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 BABAM1Q9NWV8 329 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 TFCP2L1Q9NZI6 479 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 ZBTB1Q9Y2K1 713 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 C5P01031 1676 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 IL16Q14005 1332 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 FANCIQ9NVI1 1328 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
SF1-218ENST00000489544 EIF2S2P20042 333 aaKnown RBP10.77□□□□□ -0.69
SF1-218ENST00000489544 CANXP27824 592 aaKnown RBP10.77□□□□□ -0.69
SF1-218ENST00000489544 YTHDC1Q96MU7 727 aaKnown RBP10.77□□□□□ -0.69
SF1-218ENST00000489544 TAF1LQ8IZX4 1826 aa10.77□□□□□ -0.69
SF1-218ENST00000489544 STARD3NLO95772 234 aa10.76□□□□□ -0.69
SF1-218ENST00000489544 GOLGA2Q08379 1002 aa10.76□□□□□ -0.69
SF1-218ENST00000489544 DUSP27Q5VZP5 1158 aa10.76□□□□□ -0.69
SF1-218ENST00000489544 COL23A1Q86Y22 540 aaPredicted RBP10.76□□□□□ -0.69
SF1-218ENST00000489544 CCDC87Q9NVE4 849 aa10.76□□□□□ -0.69
SF1-218ENST00000489544 PNPLA7Q6ZV29 1317 aa10.76□□□□□ -0.69
SF1-218ENST00000489544 CNTNAP4Q9C0A0 1308 aa10.76□□□□□ -0.69
SF1-218ENST00000489544 MYH14Q7Z406 1995 aaKnown RBP10.76□□□□□ -0.69
SF1-218ENST00000489544 COL5A3P25940 1745 aaPredicted RBP10.75□□□□□ -0.69
SF1-218ENST00000489544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.75□□□□□ -0.69
SF1-218ENST00000489544 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
SF1-218ENST00000489544 TCERG1O14776 1098 aaKnown RBP10.75□□□□□ -0.69
SF1-218ENST00000489544 ANXA1P04083 346 aa10.75□□□□□ -0.69
SF1-218ENST00000489544 EXOSC9Q06265 439 aaKnown RBP10.75□□□□□ -0.69
SF1-218ENST00000489544 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
SF1-218ENST00000489544 RC3H1Q5TC82 1133 aaKnown RBP10.75□□□□□ -0.69
SF1-218ENST00000489544 NBPF10Q6P3W6 841 aaKnown RBP10.75□□□□□ -0.69
SF1-218ENST00000489544 NBPF15Q8N660 670 aa10.75□□□□□ -0.69
SF1-218ENST00000489544 TEX13AQ9BXU3 409 aaPredicted RBP10.75□□□□□ -0.69
SF1-218ENST00000489544 ZNF330Q9Y3S2 320 aaPredicted RBP10.75□□□□□ -0.69
SF1-218ENST00000489544 ZNF831Q5JPB2 1677 aa10.74□□□□□ -0.69
SF1-218ENST00000489544 RPS6KA4O75676 772 aa10.74□□□□□ -0.69
SF1-218ENST00000489544 PROSER3Q2NL68 480 aa10.74□□□□□ -0.69
SF1-218ENST00000489544 ARHGEF1Q92888 912 aaKnown RBP10.74□□□□□ -0.69
SF1-218ENST00000489544 SRP68Q9UHB9 627 aaKnown RBP10.74□□□□□ -0.69
SF1-218ENST00000489544 RTCBQ9Y3I0 505 aaKnown RBP10.74□□□□□ -0.69
SF1-218ENST00000489544 CICQ96RK0 1608 aaPredicted RBP10.73□□□□□ -0.69
SF1-218ENST00000489544 TUBGCP6Q96RT7 1819 aa10.73□□□□□ -0.69
SF1-218ENST00000489544 E9PSI1 815 aa10.73□□□□□ -0.69
SF1-218ENST00000489544 ZBTB7AO95365 584 aa10.73□□□□□ -0.69
SF1-218ENST00000489544 MYL6BP14649 208 aa10.73□□□□□ -0.69
SF1-218ENST00000489544 MYH16Q9H6N6 1097 aa10.73□□□□□ -0.69
SF1-218ENST00000489544 SOS1Q07889 1333 aaPredicted RBP10.73□□□□□ -0.69
SF1-218ENST00000489544 SSFA2P28290 1259 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 EIF5P55010 431 aaKnown RBP10.72□□□□□ -0.69
SF1-218ENST00000489544 PDIA6Q15084 440 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 TWISTNBQ3B726 338 aaPredicted RBP10.72□□□□□ -0.69
SF1-218ENST00000489544 TRAPPC3LQ5T215 181 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 HDGFL1Q5TGJ6 251 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 MSL1Q68DK7 614 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 ARXQ96QS3 562 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 CHPF2Q9P2E5 772 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 ZBED9Q6R2W3 1325 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 UBR3Q6ZT12 1888 aa10.72□□□□□ -0.69
SF1-218ENST00000489544 TRMT2AQ8IZ69 625 aaKnown RBP10.71□□□□□ -0.69
SF1-218ENST00000489544 TBC1D2BQ9UPU7 963 aa10.71□□□□□ -0.69
SF1-218ENST00000489544 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
SF1-218ENST00000489544 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
SF1-218ENST00000489544 COL15A1P39059 1388 aa10.7□□□□□ -0.7
SF1-218ENST00000489544 VAMP4O75379 141 aa10.7□□□□□ -0.7
SF1-218ENST00000489544 RFC4P35249 363 aa10.7□□□□□ -0.7
SF1-218ENST00000489544 IL6STP40189 918 aaPredicted RBP10.7□□□□□ -0.7
SF1-218ENST00000489544 TTLL7Q6ZT98 887 aa10.7□□□□□ -0.7
SF1-218ENST00000489544 LRP10Q7Z4F1 713 aa10.7□□□□□ -0.7
SF1-218ENST00000489544 HOXB7P09629 217 aa10.69□□□□□ -0.7
SF1-218ENST00000489544 AIMP1Q12904 312 aaKnown RBP10.69□□□□□ -0.7
SF1-218ENST00000489544 USPL1Q5W0Q7 1092 aa10.69□□□□□ -0.7
SF1-218ENST00000489544 BCL2L12Q9HB09 334 aa10.69□□□□□ -0.7
SF1-218ENST00000489544 CASZ1Q86V15 1759 aa10.69□□□□□ -0.7
SF1-218ENST00000489544 USP42Q9H9J4 1324 aaKnown RBP10.68□□□□□ -0.7
SF1-218ENST00000489544 CAMTA2O94983 1202 aa10.68□□□□□ -0.7
SF1-218ENST00000489544 GYS1P13807 737 aa10.68□□□□□ -0.7
SF1-218ENST00000489544 HMGB2P26583 209 aaKnown RBP10.68□□□□□ -0.7
SF1-218ENST00000489544 FKBP8Q14318 412 aa10.68□□□□□ -0.7
SF1-218ENST00000489544 COPS6Q7L5N1 327 aa10.68□□□□□ -0.7
SF1-218ENST00000489544 G2E3Q7L622 706 aa10.68□□□□□ -0.7
SF1-218ENST00000489544 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
SF1-218ENST00000489544 FLAD1Q8NFF5 587 aa10.68□□□□□ -0.7
SF1-218ENST00000489544 XAGE3Q8WTP9 111 aa10.68□□□□□ -0.7
SF1-218ENST00000489544 PHAXQ9H814 394 aaKnown RBP10.68□□□□□ -0.7
SF1-218ENST00000489544 DDX21Q9NR30 783 aaKnown RBP eCLIP10.68□□□□□ -0.7
SF1-218ENST00000489544 ERBB4Q15303 1308 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 ZPR1O75312 459 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 HLFQ16534 295 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 CCDC30Q5VVM6 783 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 NPM2Q86SE8 214 aaKnown RBP10.67□□□□□ -0.7
SF1-218ENST00000489544 BCL2L13Q9BXK5 485 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 ZBTB3Q9H5J0 574 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 DBF4Q9UBU7 674 aaPredicted RBP10.67□□□□□ -0.7
SF1-218ENST00000489544 NARFQ9UHQ1 456 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 C4AP0C0L4 1744 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 QSER1Q2KHR3 1735 aa10.67□□□□□ -0.7
SF1-218ENST00000489544 SLC4A2P04920 1241 aa10.66□□□□□ -0.7
SF1-218ENST00000489544 BICDL1Q6ZP65 573 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms