RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 USPL1Q5W0Q7 1092 aa17.47■□□□□ 0.39
ATPAF2-207ENST00000488753 WWC3Q9ULE0 1092 aa17.47■□□□□ 0.39
ATPAF2-207ENST00000488753 COL15A1P39059 1388 aa17.47■□□□□ 0.39
ATPAF2-207ENST00000488753 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
ATPAF2-207ENST00000488753 UBR2Q8IWV8 1755 aa17.46■□□□□ 0.39
ATPAF2-207ENST00000488753 HEG1Q9ULI3 1381 aa17.46■□□□□ 0.39
ATPAF2-207ENST00000488753 POLRMTO00411 1230 aaKnown RBP17.46■□□□□ 0.39
ATPAF2-207ENST00000488753 DPEP1P16444 411 aa17.46■□□□□ 0.39
ATPAF2-207ENST00000488753 ZNF496Q96IT1 587 aaPredicted RBP17.46■□□□□ 0.39
ATPAF2-207ENST00000488753 KIAA1551Q9HCM1 1747 aa17.45■□□□□ 0.38
ATPAF2-207ENST00000488753 EIF5P55010 431 aaKnown RBP17.45■□□□□ 0.38
ATPAF2-207ENST00000488753 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
ATPAF2-207ENST00000488753 BCS1LQ9Y276 419 aa17.45■□□□□ 0.38
ATPAF2-207ENST00000488753 A0A087WZG4 1122 aa17.44■□□□□ 0.38
ATPAF2-207ENST00000488753 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
ATPAF2-207ENST00000488753 VIRMAQ69YN4 1812 aaKnown RBP17.44■□□□□ 0.38
ATPAF2-207ENST00000488753 BTBD11A6QL63 1104 aa17.43■□□□□ 0.38
ATPAF2-207ENST00000488753 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
ATPAF2-207ENST00000488753 KCNA3P22001 575 aa17.43■□□□□ 0.38
ATPAF2-207ENST00000488753 CANXP27824 592 aaKnown RBP17.43■□□□□ 0.38
ATPAF2-207ENST00000488753 GPBP1L1Q9HC44 474 aaPredicted RBP17.43■□□□□ 0.38
ATPAF2-207ENST00000488753 PIM2Q9P1W9 311 aa17.43■□□□□ 0.38
ATPAF2-207ENST00000488753 NFIXQ14938 502 aa17.42■□□□□ 0.38
ATPAF2-207ENST00000488753 BCL2L12Q9HB09 334 aa17.42■□□□□ 0.38
ATPAF2-207ENST00000488753 SIPA1L3O60292 1781 aaPredicted RBP17.41■□□□□ 0.38
ATPAF2-207ENST00000488753 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
ATPAF2-207ENST00000488753 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
ATPAF2-207ENST00000488753 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
ATPAF2-207ENST00000488753 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
ATPAF2-207ENST00000488753 SERPINB2P05120 415 aa17.38■□□□□ 0.37
ATPAF2-207ENST00000488753 NEFMP07197 916 aa17.38■□□□□ 0.37
ATPAF2-207ENST00000488753 MCM10Q7L590 875 aa17.38■□□□□ 0.37
ATPAF2-207ENST00000488753 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
ATPAF2-207ENST00000488753 KCNQ3O43525 872 aa17.37■□□□□ 0.37
ATPAF2-207ENST00000488753 NPM2Q86SE8 214 aaKnown RBP17.37■□□□□ 0.37
ATPAF2-207ENST00000488753 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
ATPAF2-207ENST00000488753 A1BGP04217 495 aa17.36■□□□□ 0.37
ATPAF2-207ENST00000488753 SNRPA1P09661 255 aaKnown RBP17.36■□□□□ 0.37
ATPAF2-207ENST00000488753 CHRNA5P30532 468 aa17.36■□□□□ 0.37
ATPAF2-207ENST00000488753 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
ATPAF2-207ENST00000488753 NRXN2Q9P2S2 1712 aa17.35■□□□□ 0.37
ATPAF2-207ENST00000488753 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
ATPAF2-207ENST00000488753 TAF7Q15545 349 aaPredicted RBP17.34■□□□□ 0.37
ATPAF2-207ENST00000488753 PLEKHF1Q96S99 279 aa17.34■□□□□ 0.37
ATPAF2-207ENST00000488753 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
ATPAF2-207ENST00000488753 TBC1D2BQ9UPU7 963 aa17.34■□□□□ 0.37
ATPAF2-207ENST00000488753 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
ATPAF2-207ENST00000488753 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
ATPAF2-207ENST00000488753 CARMIL3Q8ND23 1372 aa17.33■□□□□ 0.36
ATPAF2-207ENST00000488753 DCTN1Q14203 1278 aa17.33■□□□□ 0.36
ATPAF2-207ENST00000488753 RALBP1Q15311 655 aa17.33■□□□□ 0.36
ATPAF2-207ENST00000488753 TBC1D9BQ66K14 1250 aa17.33■□□□□ 0.36
ATPAF2-207ENST00000488753 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.36
ATPAF2-207ENST00000488753 ARFGEF1Q9Y6D6 1849 aa17.33■□□□□ 0.36
ATPAF2-207ENST00000488753 RGL2O15211 777 aa17.32■□□□□ 0.36
ATPAF2-207ENST00000488753 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
ATPAF2-207ENST00000488753 BICDL1Q6ZP65 573 aa17.32■□□□□ 0.36
ATPAF2-207ENST00000488753 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
ATPAF2-207ENST00000488753 H0YIN7 160 aa17.31■□□□□ 0.36
ATPAF2-207ENST00000488753 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
ATPAF2-207ENST00000488753 C9orf131Q5VYM1 1079 aa17.31■□□□□ 0.36
ATPAF2-207ENST00000488753 CLEC4GQ6UXB4 293 aa17.31■□□□□ 0.36
ATPAF2-207ENST00000488753 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
ATPAF2-207ENST00000488753 SETDB2Q96T68 719 aa17.31■□□□□ 0.36
ATPAF2-207ENST00000488753 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
ATPAF2-207ENST00000488753 PRAMEF22A3QJZ6 481 aa17.3■□□□□ 0.36
ATPAF2-207ENST00000488753 KIF3CO14782 793 aa17.3■□□□□ 0.36
ATPAF2-207ENST00000488753 C2CD5Q86YS7 1000 aa17.3■□□□□ 0.36
ATPAF2-207ENST00000488753 TTLL6Q8N841 843 aa17.3■□□□□ 0.36
ATPAF2-207ENST00000488753 AFDNP55196 1824 aaKnown RBP17.3■□□□□ 0.36
ATPAF2-207ENST00000488753 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
ATPAF2-207ENST00000488753 PDE6BP35913 854 aa17.29■□□□□ 0.36
ATPAF2-207ENST00000488753 PRR5LQ6MZQ0 368 aa17.29■□□□□ 0.36
ATPAF2-207ENST00000488753 ZNF652Q9Y2D9 606 aa17.29■□□□□ 0.36
ATPAF2-207ENST00000488753 ZC3H4Q9UPT8 1303 aaKnown RBP17.28■□□□□ 0.36
ATPAF2-207ENST00000488753 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
ATPAF2-207ENST00000488753 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
ATPAF2-207ENST00000488753 NBPF26B4DH59 902 aa17.26■□□□□ 0.35
ATPAF2-207ENST00000488753 ST5P78524 1137 aa17.26■□□□□ 0.35
ATPAF2-207ENST00000488753 NBPF10Q6P3W6 841 aaKnown RBP17.26■□□□□ 0.35
ATPAF2-207ENST00000488753 NBPF15Q8N660 670 aa17.26■□□□□ 0.35
ATPAF2-207ENST00000488753 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
ATPAF2-207ENST00000488753 DLEC1Q9Y238 1755 aa17.25■□□□□ 0.35
ATPAF2-207ENST00000488753 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
ATPAF2-207ENST00000488753 NPHP1O15259 732 aa17.25■□□□□ 0.35
ATPAF2-207ENST00000488753 HSPA6P17066 643 aa17.25■□□□□ 0.35
ATPAF2-207ENST00000488753 PIP4K2AP48426 406 aaPredicted RBP17.25■□□□□ 0.35
ATPAF2-207ENST00000488753 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
ATPAF2-207ENST00000488753 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-207ENST00000488753 TOMM70O94826 608 aa17.24■□□□□ 0.35
ATPAF2-207ENST00000488753 EIF4A1P60842 406 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-207ENST00000488753 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-207ENST00000488753 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
ATPAF2-207ENST00000488753 LMNB1P20700 586 aa17.23■□□□□ 0.35
ATPAF2-207ENST00000488753 STYK1Q6J9G0 422 aa17.23■□□□□ 0.35
ATPAF2-207ENST00000488753 NBPF5PQ86XG9 351 aaPredicted RBP17.23■□□□□ 0.35
ATPAF2-207ENST00000488753 ZNF622Q969S3 477 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATPAF2-207ENST00000488753 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
ATPAF2-207ENST00000488753 SRGNP10124 158 aa17.22■□□□□ 0.35
ATPAF2-207ENST00000488753 RASSF7Q02833 373 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms