RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 CLSPNQ9HAW4 1339 aa6.31□□□□□ -1.4
PCGF3-212ENST00000488032 SHROOM4Q9ULL8 1493 aa6.31□□□□□ -1.4
PCGF3-212ENST00000488032 HSP90B1P14625 803 aaKnown RBP6.31□□□□□ -1.4
PCGF3-212ENST00000488032 SNRPBP14678 240 aaKnown RBP6.31□□□□□ -1.4
PCGF3-212ENST00000488032 WEE1P30291 646 aa6.31□□□□□ -1.4
PCGF3-212ENST00000488032 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
PCGF3-212ENST00000488032 STAG2Q8N3U4 1231 aa6.31□□□□□ -1.4
PCGF3-212ENST00000488032 FOXO3O43524 673 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 POU4F2Q12837 409 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 TEAD4Q15561 434 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 C4orf17Q53FE4 359 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 B4GALNT3Q6L9W6 998 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 POTEAQ6S8J7 498 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 SCG3Q8WXD2 468 aaKnown RBP6.3□□□□□ -1.4
PCGF3-212ENST00000488032 CABP1Q9NZU7 370 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 USP3Q9Y6I4 520 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 ATAD2Q6PL18 1390 aa6.3□□□□□ -1.4
PCGF3-212ENST00000488032 A0A1B0GTH6 734 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 POTECB2RU33 542 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 C21orf2O43822 256 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 PPP1R12BO60237 982 aaPredicted RBP6.29□□□□□ -1.4
PCGF3-212ENST00000488032 RHOQP17081 205 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 PLA2G4AP47712 749 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 HIRAP54198 1017 aaPredicted RBP6.29□□□□□ -1.4
PCGF3-212ENST00000488032 OCLNQ16625 522 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 NBPF1Q3BBV0 1214 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 TIMMDC1Q9NPL8 285 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 DYRK1BQ9Y463 629 aa6.29□□□□□ -1.4
PCGF3-212ENST00000488032 SERTM1A2A2V5 107 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 PRMT3O60678 531 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 ATP2B4P23634 1241 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 NOS2P35228 1153 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 PTSQ03393 145 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 TBCELQ5QJ74 424 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 ZNF787Q6DD87 383 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 C1orf216Q8TAB5 229 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 L3MBTL2Q969R5 705 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 C2orf49Q9BVC5 232 aaPredicted RBP6.28□□□□□ -1.4
PCGF3-212ENST00000488032 ZDHHC3Q9NYG2 299 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 CXXC1Q9P0U4 656 aaPredicted RBP6.28□□□□□ -1.4
PCGF3-212ENST00000488032 ZNF232Q9UNY5 417 aa6.28□□□□□ -1.4
PCGF3-212ENST00000488032 SENP3-EIF4A1A0A087X0R7 540 aa6.27□□□□□ -1.41
PCGF3-212ENST00000488032 SLC35F4A4IF30 521 aa6.27□□□□□ -1.41
PCGF3-212ENST00000488032 EML1O00423 815 aa6.27□□□□□ -1.41
PCGF3-212ENST00000488032 LGR5O75473 907 aa6.27□□□□□ -1.41
PCGF3-212ENST00000488032 PHKA2P46019 1235 aa6.27□□□□□ -1.41
PCGF3-212ENST00000488032 ZDHHC1Q8WTX9 485 aa6.27□□□□□ -1.41
PCGF3-212ENST00000488032 PRIMPOLQ96LW4 560 aa6.27□□□□□ -1.41
PCGF3-212ENST00000488032 TATP17735 454 aaPredicted RBP6.26□□□□□ -1.41
PCGF3-212ENST00000488032 CCDC155Q8N6L0 562 aa6.26□□□□□ -1.41
PCGF3-212ENST00000488032 CHMP7Q8WUX9 453 aaPredicted RBP6.26□□□□□ -1.41
PCGF3-212ENST00000488032 COL26A1Q96A83 441 aa6.26□□□□□ -1.41
PCGF3-212ENST00000488032 VTI1AQ96AJ9 217 aa6.26□□□□□ -1.41
PCGF3-212ENST00000488032 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.26□□□□□ -1.413e-6■■■■■ 28.8
PCGF3-212ENST00000488032 SLAIN2Q9P270 581 aa6.26□□□□□ -1.41
PCGF3-212ENST00000488032 GPC6Q9Y625 555 aaPredicted RBP6.26□□□□□ -1.41
PCGF3-212ENST00000488032 PTCD1O75127 700 aaKnown RBP6.25□□□□□ -1.41
PCGF3-212ENST00000488032 F11P03951 625 aa6.25□□□□□ -1.41
PCGF3-212ENST00000488032 SSFA2P28290 1259 aa6.25□□□□□ -1.41
PCGF3-212ENST00000488032 ZEB1P37275 1124 aaPredicted RBP6.25□□□□□ -1.41
PCGF3-212ENST00000488032 FKBP5Q13451 457 aaPredicted RBP6.25□□□□□ -1.41
PCGF3-212ENST00000488032 C1orf53Q5VUE5 145 aa6.25□□□□□ -1.41
PCGF3-212ENST00000488032 NPAS3Q8IXF0 933 aa6.25□□□□□ -1.41
PCGF3-212ENST00000488032 AIDAQ96BJ3 306 aa6.25□□□□□ -1.41
PCGF3-212ENST00000488032 TRAIPQ9BWF2 469 aa6.25□□□□□ -1.41
PCGF3-212ENST00000488032 CARNS1A5YM72 827 aa6.24□□□□□ -1.41
PCGF3-212ENST00000488032 ATP4AP20648 1035 aa6.24□□□□□ -1.41
PCGF3-212ENST00000488032 MSX1P28360 303 aa6.24□□□□□ -1.41
PCGF3-212ENST00000488032 LBRQ14739 615 aaKnown RBP6.24□□□□□ -1.41
PCGF3-212ENST00000488032 PGBD3Q8N328 593 aa6.24□□□□□ -1.41
PCGF3-212ENST00000488032 GMCL1Q96IK5 515 aa6.24□□□□□ -1.41
PCGF3-212ENST00000488032 CRISPLD1Q9H336 500 aa6.24□□□□□ -1.41
PCGF3-212ENST00000488032 BCCIPQ9P287 314 aaKnown RBP eCLIP6.24□□□□□ -1.41
PCGF3-212ENST00000488032 PARP3Q9Y6F1 533 aa6.24□□□□□ -1.41
PCGF3-212ENST00000488032 H7C1W4 665 aa6.23□□□□□ -1.41
PCGF3-212ENST00000488032 ITGA6P23229 1130 aa6.23□□□□□ -1.41
PCGF3-212ENST00000488032 TXLNAP40222 546 aa6.23□□□□□ -1.41
PCGF3-212ENST00000488032 HIF1AQ16665 826 aa6.23□□□□□ -1.41
PCGF3-212ENST00000488032 SH3PXD2AQ5TCZ1 1133 aa6.23□□□□□ -1.41
PCGF3-212ENST00000488032 ALDH16A1Q8IZ83 802 aa6.23□□□□□ -1.41
PCGF3-212ENST00000488032 GAS2L1Q99501 681 aaPredicted RBP6.23□□□□□ -1.41
PCGF3-212ENST00000488032 PHACTR1Q9C0D0 580 aa6.23□□□□□ -1.41
PCGF3-212ENST00000488032 NXF1Q9UBU9 619 aaKnown RBP6.23□□□□□ -1.41
PCGF3-212ENST00000488032 MTMR7Q9Y216 660 aa6.23□□□□□ -1.41
PCGF3-212ENST00000488032 PPFIA3O75145 1194 aa6.22□□□□□ -1.41
PCGF3-212ENST00000488032 BRD1O95696 1058 aa6.22□□□□□ -1.41
PCGF3-212ENST00000488032 RTN1Q16799 776 aa6.22□□□□□ -1.41
PCGF3-212ENST00000488032 RHPN1Q8TCX5 695 aa6.22□□□□□ -1.41
PCGF3-212ENST00000488032 MYO19Q96H55 970 aa6.22□□□□□ -1.41
PCGF3-212ENST00000488032 GPAMQ9HCL2 828 aa6.22□□□□□ -1.41
PCGF3-212ENST00000488032 FGD1P98174 961 aa6.21□□□□□ -1.42
PCGF3-212ENST00000488032 ARSJQ5FYB0 599 aaPredicted RBP6.21□□□□□ -1.42
PCGF3-212ENST00000488032 EFHC2Q5JST6 749 aa6.21□□□□□ -1.42
PCGF3-212ENST00000488032 PHLDB3Q6NSJ2 640 aa6.21□□□□□ -1.42
PCGF3-212ENST00000488032 BICDL1Q6ZP65 573 aa6.21□□□□□ -1.42
PCGF3-212ENST00000488032 RIPOR1Q6ZS17 1223 aa6.21□□□□□ -1.42
PCGF3-212ENST00000488032 NLRP8Q86W28 1048 aa6.21□□□□□ -1.42
PCGF3-212ENST00000488032 TRIM22Q8IYM9 498 aa6.21□□□□□ -1.42
PCGF3-212ENST00000488032 NGLY1Q96IV0 654 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms