RNA–Protein interactions for RNA: ENST00000485449.1

CBX8-204, Transcript of chromobox 8, humanhuman

TSL 3

Gene CBX8, Length 581 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-204ENST00000485449 SRCAPQ6ZRS2 3230 aa25.45■■□□□ 1.67
CBX8-204ENST00000485449 SNRPA1P09661 255 aaKnown RBP25.45■■□□□ 1.66
CBX8-204ENST00000485449 NCBP3Q53F19 620 aaKnown RBP25.45■■□□□ 1.66
CBX8-204ENST00000485449 LAMB4A4D0S4 1761 aa25.45■■□□□ 1.66
CBX8-204ENST00000485449 C4AP0C0L4 1744 aa25.45■■□□□ 1.66
CBX8-204ENST00000485449 SENP3-EIF4A1A0A087X0R7 540 aa25.44■■□□□ 1.66
CBX8-204ENST00000485449 EIF4A1P60842 406 aaKnown RBP25.44■■□□□ 1.66
CBX8-204ENST00000485449 CCDC27Q2M243 656 aa25.44■■□□□ 1.66
CBX8-204ENST00000485449 ATF5Q9Y2D1 282 aaPredicted RBP25.44■■□□□ 1.66
CBX8-204ENST00000485449 CHL1O00533 1208 aa25.43■■□□□ 1.66
CBX8-204ENST00000485449 ADRA2BP18089 450 aa25.43■■□□□ 1.66
CBX8-204ENST00000485449 CALD1Q05682 793 aaKnown RBP25.43■■□□□ 1.66
CBX8-204ENST00000485449 TRAPPC3LQ5T215 181 aa25.43■■□□□ 1.66
CBX8-204ENST00000485449 PRAMEF22A3QJZ6 481 aa25.42■■□□□ 1.66
CBX8-204ENST00000485449 LAS1LQ9Y4W2 734 aaKnown RBP25.42■■□□□ 1.66
CBX8-204ENST00000485449 CFAP44Q96MT7 982 aa25.41■■□□□ 1.66
CBX8-204ENST00000485449 ZBTB1Q9Y2K1 713 aa25.41■■□□□ 1.66
CBX8-204ENST00000485449 USP16Q9Y5T5 823 aa25.41■■□□□ 1.66
CBX8-204ENST00000485449 ARHGEF1Q92888 912 aaKnown RBP25.4■■□□□ 1.66
CBX8-204ENST00000485449 SOS1Q07889 1333 aaPredicted RBP25.39■■□□□ 1.66
CBX8-204ENST00000485449 GIGYF1O75420 1035 aaPredicted RBP25.39■■□□□ 1.66
CBX8-204ENST00000485449 PTGER2P43116 358 aa25.39■■□□□ 1.66
CBX8-204ENST00000485449 WWC1Q8IX03 1113 aa25.39■■□□□ 1.66
CBX8-204ENST00000485449 ZNF853P0CG23 659 aa25.38■■□□□ 1.65
CBX8-204ENST00000485449 CANXP27824 592 aaKnown RBP25.38■■□□□ 1.65
CBX8-204ENST00000485449 SGIP1Q9BQI5 828 aa25.38■■□□□ 1.65
CBX8-204ENST00000485449 IFT57Q9NWB7 429 aa25.38■■□□□ 1.65
CBX8-204ENST00000485449 A1BGP04217 495 aa25.37■■□□□ 1.65
CBX8-204ENST00000485449 RFC4P35249 363 aa25.37■■□□□ 1.65
CBX8-204ENST00000485449 GNAI1P63096 354 aa25.37■■□□□ 1.65
CBX8-204ENST00000485449 COL15A1P39059 1388 aa25.36■■□□□ 1.65
CBX8-204ENST00000485449 NGEFQ8N5V2 710 aa25.36■■□□□ 1.65
CBX8-204ENST00000485449 SALL2Q9Y467 1007 aaPredicted RBP25.36■■□□□ 1.65
CBX8-204ENST00000485449 MBIPQ9NS73 344 aa25.35■■□□□ 1.65
CBX8-204ENST00000485449 EIF5P55010 431 aaKnown RBP25.34■■□□□ 1.65
CBX8-204ENST00000485449 MSL1Q68DK7 614 aa25.34■■□□□ 1.65
CBX8-204ENST00000485449 IL6STP40189 918 aaPredicted RBP25.33■■□□□ 1.65
CBX8-204ENST00000485449 POLD1P28340 1107 aa25.32■■□□□ 1.64
CBX8-204ENST00000485449 IL16Q14005 1332 aa25.32■■□□□ 1.64
CBX8-204ENST00000485449 USP42Q9H9J4 1324 aaKnown RBP25.32■■□□□ 1.64
CBX8-204ENST00000485449 PPP1R1BQ9UD71 204 aaPredicted RBP25.31■■□□□ 1.64
CBX8-204ENST00000485449 A0A087WZG4 1122 aa25.3■■□□□ 1.64
CBX8-204ENST00000485449 GYS1P13807 737 aa25.3■■□□□ 1.64
CBX8-204ENST00000485449 PIP4K2AP48426 406 aaPredicted RBP25.3■■□□□ 1.64
CBX8-204ENST00000485449 KRT24Q2M2I5 525 aa25.3■■□□□ 1.64
CBX8-204ENST00000485449 WDR63Q8IWG1 891 aa25.3■■□□□ 1.64
CBX8-204ENST00000485449 SRP68Q9UHB9 627 aaKnown RBP25.3■■□□□ 1.64
CBX8-204ENST00000485449 NBPF26B4DH59 902 aa25.29■■□□□ 1.64
CBX8-204ENST00000485449 ZPR1O75312 459 aa25.29■■□□□ 1.64
CBX8-204ENST00000485449 NBPF10Q6P3W6 841 aaKnown RBP25.29■■□□□ 1.64
CBX8-204ENST00000485449 NBPF15Q8N660 670 aa25.29■■□□□ 1.64
CBX8-204ENST00000485449 NARFQ9UHQ1 456 aa25.29■■□□□ 1.64
CBX8-204ENST00000485449 ZNF330Q9Y3S2 320 aaPredicted RBP25.29■■□□□ 1.64
CBX8-204ENST00000485449 NLGN1Q8N2Q7 840 aa25.28■■□□□ 1.64
CBX8-204ENST00000485449 ARXQ96QS3 562 aa25.28■■□□□ 1.64
CBX8-204ENST00000485449 SCN7AQ01118 1682 aa25.27■■□□□ 1.64
CBX8-204ENST00000485449 USPL1Q5W0Q7 1092 aa25.27■■□□□ 1.64
CBX8-204ENST00000485449 NPM2Q86SE8 214 aaKnown RBP25.27■■□□□ 1.64
CBX8-204ENST00000485449 BCORQ6W2J9 1755 aa25.26■■□□□ 1.63
CBX8-204ENST00000485449 HOXB7P09629 217 aa25.26■■□□□ 1.63
CBX8-204ENST00000485449 ERBB4Q15303 1308 aa25.26■■□□□ 1.63
CBX8-204ENST00000485449 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
CBX8-204ENST00000485449 TSR2Q969E8 191 aaKnown RBP25.25■■□□□ 1.63
CBX8-204ENST00000485449 FKBP8Q14318 412 aa25.24■■□□□ 1.63
CBX8-204ENST00000485449 DUSP27Q5VZP5 1158 aa25.24■■□□□ 1.63
CBX8-204ENST00000485449 TBC1D2BQ9UPU7 963 aa25.24■■□□□ 1.63
CBX8-204ENST00000485449 ZNF521Q96K83 1311 aa25.23■■□□□ 1.63
CBX8-204ENST00000485449 MMP10P09238 476 aa25.22■■□□□ 1.63
CBX8-204ENST00000485449 DZIP3Q86Y13 1208 aaKnown RBP25.22■■□□□ 1.63
CBX8-204ENST00000485449 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
CBX8-204ENST00000485449 MYL6BP14649 208 aa25.21■■□□□ 1.63
CBX8-204ENST00000485449 C8orf58Q8NAV2 365 aa25.21■■□□□ 1.63
CBX8-204ENST00000485449 NECTIN2Q92692 538 aa25.21■■□□□ 1.63
CBX8-204ENST00000485449 PDIA6Q15084 440 aa25.2■■□□□ 1.62
CBX8-204ENST00000485449 HDGFL1Q5TGJ6 251 aa25.2■■□□□ 1.62
CBX8-204ENST00000485449 FHDC1Q9C0D6 1143 aaPredicted RBP25.2■■□□□ 1.62
CBX8-204ENST00000485449 FANCIQ9NVI1 1328 aa25.19■■□□□ 1.62
CBX8-204ENST00000485449 ELL2O00472 640 aaPredicted RBP25.19■■□□□ 1.62
CBX8-204ENST00000485449 CAMTA2O94983 1202 aa25.19■■□□□ 1.62
CBX8-204ENST00000485449 SPINK5Q9NQ38 1064 aaPredicted RBP25.19■■□□□ 1.62
CBX8-204ENST00000485449 TM4SF1P30408 202 aa25.18■■□□□ 1.62
CBX8-204ENST00000485449 PROSER3Q2NL68 480 aa25.17■■□□□ 1.62
CBX8-204ENST00000485449 LRP10Q7Z4F1 713 aa25.17■■□□□ 1.62
CBX8-204ENST00000485449 DDX21Q9NR30 783 aaKnown RBP eCLIP25.17■■□□□ 1.62
CBX8-204ENST00000485449 ANXA1P04083 346 aa25.16■■□□□ 1.62
CBX8-204ENST00000485449 TSPYL6Q8N831 410 aa25.16■■□□□ 1.62
CBX8-204ENST00000485449 MYH16Q9H6N6 1097 aa25.16■■□□□ 1.62
CBX8-204ENST00000485449 PARP3Q9Y6F1 533 aa25.16■■□□□ 1.62
CBX8-204ENST00000485449 NUP98P52948 1817 aa25.16■■□□□ 1.62
CBX8-204ENST00000485449 AFDNP55196 1824 aaKnown RBP25.15■■□□□ 1.62
CBX8-204ENST00000485449 DDR1Q08345 913 aa25.15■■□□□ 1.62
CBX8-204ENST00000485449 GOLGA2Q08379 1002 aa25.15■■□□□ 1.62
CBX8-204ENST00000485449 NFIXQ14938 502 aa25.15■■□□□ 1.62
CBX8-204ENST00000485449 KLHL34Q8N239 644 aa25.15■■□□□ 1.62
CBX8-204ENST00000485449 SYT17Q9BSW7 474 aa25.15■■□□□ 1.62
CBX8-204ENST00000485449 CHPF2Q9P2E5 772 aa25.15■■□□□ 1.62
CBX8-204ENST00000485449 KIF13BQ9NQT8 1826 aa25.14■■□□□ 1.62
CBX8-204ENST00000485449 RGL2O15211 777 aa25.14■■□□□ 1.62
CBX8-204ENST00000485449 CLEC4GQ6UXB4 293 aa25.14■■□□□ 1.62
CBX8-204ENST00000485449 TTLL7Q6ZT98 887 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms