RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 CASZ1Q86V15 1759 aa23.96■■□□□ 1.43
ERCC2-205ENST00000485403 GNAI1P63096 354 aa23.96■■□□□ 1.43
ERCC2-205ENST00000485403 TEX13AQ9BXU3 409 aaPredicted RBP23.96■■□□□ 1.43
ERCC2-205ENST00000485403 SNRPA1P09661 255 aaKnown RBP23.95■■□□□ 1.43
ERCC2-205ENST00000485403 CYP19A1P11511 503 aaPredicted RBP23.95■■□□□ 1.43
ERCC2-205ENST00000485403 SRCAPQ6ZRS2 3230 aa23.95■■□□□ 1.42
ERCC2-205ENST00000485403 PSDA5PKW4 1024 aaPredicted RBP23.94■■□□□ 1.42
ERCC2-205ENST00000485403 AK7Q96M32 723 aa23.94■■□□□ 1.42
ERCC2-205ENST00000485403 MBIPQ9NS73 344 aa23.94■■□□□ 1.42
ERCC2-205ENST00000485403 TFCP2L1Q9NZI6 479 aa23.94■■□□□ 1.42
ERCC2-205ENST00000485403 CRKLP46109 303 aaKnown RBP23.94■■□□□ 1.42
ERCC2-205ENST00000485403 GIGYF1O75420 1035 aaPredicted RBP23.93■■□□□ 1.42
ERCC2-205ENST00000485403 INTS5Q6P9B9 1019 aaKnown RBP23.93■■□□□ 1.42
ERCC2-205ENST00000485403 PNPLA7Q6ZV29 1317 aa23.93■■□□□ 1.42
ERCC2-205ENST00000485403 PRAMEF22A3QJZ6 481 aa23.92■■□□□ 1.42
ERCC2-205ENST00000485403 STARD3NLO95772 234 aa23.92■■□□□ 1.42
ERCC2-205ENST00000485403 AMIGO3Q86WK7 504 aa23.92■■□□□ 1.42
ERCC2-205ENST00000485403 TSR2Q969E8 191 aaKnown RBP23.91■■□□□ 1.42
ERCC2-205ENST00000485403 CCDC87Q9NVE4 849 aa23.91■■□□□ 1.42
ERCC2-205ENST00000485403 USP16Q9Y5T5 823 aa23.91■■□□□ 1.42
ERCC2-205ENST00000485403 FANCIQ9NVI1 1328 aa23.91■■□□□ 1.42
ERCC2-205ENST00000485403 GNPATO15228 680 aa23.9■■□□□ 1.42
ERCC2-205ENST00000485403 RPS6KA4O75676 772 aa23.89■■□□□ 1.42
ERCC2-205ENST00000485403 SSFA2P28290 1259 aa23.89■■□□□ 1.42
ERCC2-205ENST00000485403 FLAD1Q8NFF5 587 aa23.89■■□□□ 1.41
ERCC2-205ENST00000485403 PDGFDQ9GZP0 370 aaPredicted RBP23.89■■□□□ 1.41
ERCC2-205ENST00000485403 ZBTB1Q9Y2K1 713 aa23.88■■□□□ 1.41
ERCC2-205ENST00000485403 RTCBQ9Y3I0 505 aaKnown RBP23.88■■□□□ 1.41
ERCC2-205ENST00000485403 C4AP0C0L4 1744 aa23.87■■□□□ 1.41
ERCC2-205ENST00000485403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.87■■□□□ 1.41
ERCC2-205ENST00000485403 ADRA2BP18089 450 aa23.86■■□□□ 1.41
ERCC2-205ENST00000485403 KRT24Q2M2I5 525 aa23.86■■□□□ 1.41
ERCC2-205ENST00000485403 COL23A1Q86Y22 540 aaPredicted RBP23.86■■□□□ 1.41
ERCC2-205ENST00000485403 SOS1Q07889 1333 aaPredicted RBP23.85■■□□□ 1.41
ERCC2-205ENST00000485403 HOXB7P09629 217 aa23.85■■□□□ 1.41
ERCC2-205ENST00000485403 A1BGP04217 495 aa23.84■■□□□ 1.41
ERCC2-205ENST00000485403 EXOSC9Q06265 439 aaKnown RBP23.84■■□□□ 1.41
ERCC2-205ENST00000485403 SMIM5Q71RC9 77 aa23.84■■□□□ 1.41
ERCC2-205ENST00000485403 PHF14O94880 888 aa23.84■■□□□ 1.41
ERCC2-205ENST00000485403 COL24A1Q17RW2 1714 aa23.83■■□□□ 1.41
ERCC2-205ENST00000485403 TRAPPC3LQ5T215 181 aa23.83■■□□□ 1.41
ERCC2-205ENST00000485403 CANXP27824 592 aaKnown RBP23.82■■□□□ 1.4
ERCC2-205ENST00000485403 IL6STP40189 918 aaPredicted RBP23.82■■□□□ 1.4
ERCC2-205ENST00000485403 EIF5P55010 431 aaKnown RBP23.82■■□□□ 1.4
ERCC2-205ENST00000485403 SLC16A10Q8TF71 515 aa23.82■■□□□ 1.4
ERCC2-205ENST00000485403 NBPF26B4DH59 902 aa23.81■■□□□ 1.4
ERCC2-205ENST00000485403 NBPF10Q6P3W6 841 aaKnown RBP23.81■■□□□ 1.4
ERCC2-205ENST00000485403 NBPF15Q8N660 670 aa23.81■■□□□ 1.4
ERCC2-205ENST00000485403 ARHGEF1Q92888 912 aaKnown RBP23.81■■□□□ 1.4
ERCC2-205ENST00000485403 RCAN3Q9UKA8 241 aa23.81■■□□□ 1.4
ERCC2-205ENST00000485403 COL15A1P39059 1388 aa23.81■■□□□ 1.4
ERCC2-205ENST00000485403 ERBB4Q15303 1308 aa23.81■■□□□ 1.4
ERCC2-205ENST00000485403 C8orf58Q8NAV2 365 aa23.8■■□□□ 1.4
ERCC2-205ENST00000485403 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
ERCC2-205ENST00000485403 MTFR1LQ9H019 292 aa23.79■■□□□ 1.4
ERCC2-205ENST00000485403 PIP4K2AP48426 406 aaPredicted RBP23.78■■□□□ 1.4
ERCC2-205ENST00000485403 MSH5O43196 834 aa23.77■■□□□ 1.4
ERCC2-205ENST00000485403 ZBTB7AO95365 584 aa23.77■■□□□ 1.4
ERCC2-205ENST00000485403 EIF2S2P20042 333 aaKnown RBP23.77■■□□□ 1.4
ERCC2-205ENST00000485403 RFC4P35249 363 aa23.77■■□□□ 1.4
ERCC2-205ENST00000485403 TSPYL6Q8N831 410 aa23.77■■□□□ 1.4
ERCC2-205ENST00000485403 USP42Q9H9J4 1324 aaKnown RBP23.77■■□□□ 1.39
ERCC2-205ENST00000485403 PDIA6Q15084 440 aa23.76■■□□□ 1.39
ERCC2-205ENST00000485403 SUPT16HQ9Y5B9 1047 aaKnown RBP23.76■■□□□ 1.39
ERCC2-205ENST00000485403 LRP5O75197 1615 aa23.76■■□□□ 1.39
ERCC2-205ENST00000485403 ELL2O00472 640 aaPredicted RBP23.75■■□□□ 1.39
ERCC2-205ENST00000485403 HDGFL1Q5TGJ6 251 aa23.75■■□□□ 1.39
ERCC2-205ENST00000485403 LRP10Q7Z4F1 713 aa23.75■■□□□ 1.39
ERCC2-205ENST00000485403 SCN7AQ01118 1682 aa23.74■■□□□ 1.39
ERCC2-205ENST00000485403 A0A087WZG4 1122 aa23.74■■□□□ 1.39
ERCC2-205ENST00000485403 NARFQ9UHQ1 456 aa23.74■■□□□ 1.39
ERCC2-205ENST00000485403 BCORQ6W2J9 1755 aa23.74■■□□□ 1.39
ERCC2-205ENST00000485403 TWISTNBQ3B726 338 aaPredicted RBP23.74■■□□□ 1.39
ERCC2-205ENST00000485403 GYS1P13807 737 aa23.73■■□□□ 1.39
ERCC2-205ENST00000485403 SGIP1Q9BQI5 828 aa23.73■■□□□ 1.39
ERCC2-205ENST00000485403 SPON1Q9HCB6 807 aa23.73■■□□□ 1.39
ERCC2-205ENST00000485403 CACNA1FO60840 1977 aa23.73■■□□□ 1.39
ERCC2-205ENST00000485403 VAMP4O75379 141 aa23.72■■□□□ 1.39
ERCC2-205ENST00000485403 PROSER3Q2NL68 480 aa23.72■■□□□ 1.39
ERCC2-205ENST00000485403 NECTIN2Q92692 538 aa23.72■■□□□ 1.39
ERCC2-205ENST00000485403 CHMP4AQ9BY43 222 aa23.72■■□□□ 1.39
ERCC2-205ENST00000485403 DDX21Q9NR30 783 aaKnown RBP eCLIP23.72■■□□□ 1.39
ERCC2-205ENST00000485403 SRP68Q9UHB9 627 aaKnown RBP23.72■■□□□ 1.39
ERCC2-205ENST00000485403 ZNF330Q9Y3S2 320 aaPredicted RBP23.72■■□□□ 1.39
ERCC2-205ENST00000485403 PTGER2P43116 358 aa23.71■■□□□ 1.39
ERCC2-205ENST00000485403 CHPF2Q9P2E5 772 aa23.71■■□□□ 1.39
ERCC2-205ENST00000485403 ATF5Q9Y2D1 282 aaPredicted RBP23.71■■□□□ 1.39
ERCC2-205ENST00000485403 ZPR1O75312 459 aa23.7■■□□□ 1.38
ERCC2-205ENST00000485403 MYL6BP14649 208 aa23.7■■□□□ 1.38
ERCC2-205ENST00000485403 RARSP54136 660 aaKnown RBP23.7■■□□□ 1.38
ERCC2-205ENST00000485403 NPM2Q86SE8 214 aaKnown RBP23.7■■□□□ 1.38
ERCC2-205ENST00000485403 DBF4Q9UBU7 674 aaPredicted RBP23.7■■□□□ 1.38
ERCC2-205ENST00000485403 USPL1Q5W0Q7 1092 aa23.69■■□□□ 1.38
ERCC2-205ENST00000485403 DZIP3Q86Y13 1208 aaKnown RBP23.69■■□□□ 1.38
ERCC2-205ENST00000485403 ZNF428Q96B54 188 aa23.69■■□□□ 1.38
ERCC2-205ENST00000485403 TBC1D2BQ9UPU7 963 aa23.69■■□□□ 1.38
ERCC2-205ENST00000485403 CAMTA2O94983 1202 aa23.69■■□□□ 1.38
ERCC2-205ENST00000485403 ANXA1P04083 346 aa23.69■■□□□ 1.38
ERCC2-205ENST00000485403 MSL1Q68DK7 614 aa23.69■■□□□ 1.38
ERCC2-205ENST00000485403 NLGN1Q8N2Q7 840 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms