RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 RTF1Q92541 710 aaKnown RBP14.06□□□□□ -0.16
DDX56-212ENST00000485367 ZNF790Q6PG37 636 aa14.06□□□□□ -0.16
DDX56-212ENST00000485367 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
DDX56-212ENST00000485367 UTRNP46939 3433 aa14.05□□□□□ -0.16
DDX56-212ENST00000485367 CEMIPQ8WUJ3 1361 aa14.05□□□□□ -0.16
DDX56-212ENST00000485367 SOS1Q07889 1333 aaPredicted RBP14.05□□□□□ -0.16
DDX56-212ENST00000485367 USP42Q9H9J4 1324 aaKnown RBP14.05□□□□□ -0.16
DDX56-212ENST00000485367 BTBD11A6QL63 1104 aa14.05□□□□□ -0.16
DDX56-212ENST00000485367 GRIN3BO60391 1043 aa14.05□□□□□ -0.16
DDX56-212ENST00000485367 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
DDX56-212ENST00000485367 RALBP1Q15311 655 aa14.05□□□□□ -0.16
DDX56-212ENST00000485367 MCM10Q7L590 875 aa14.05□□□□□ -0.16
DDX56-212ENST00000485367 WWC3Q9ULE0 1092 aa14.05□□□□□ -0.16
DDX56-212ENST00000485367 PARP3Q9Y6F1 533 aa14.05□□□□□ -0.16
DDX56-212ENST00000485367 ZPR1O75312 459 aa14.04□□□□□ -0.16
DDX56-212ENST00000485367 STARD3NLO95772 234 aa14.04□□□□□ -0.16
DDX56-212ENST00000485367 NEFMP07197 916 aa14.04□□□□□ -0.16
DDX56-212ENST00000485367 CANXP27824 592 aaKnown RBP14.04□□□□□ -0.16
DDX56-212ENST00000485367 ZBTB1Q9Y2K1 713 aa14.04□□□□□ -0.16
DDX56-212ENST00000485367 DCTN1Q14203 1278 aa14.04□□□□□ -0.16
DDX56-212ENST00000485367 HEG1Q9ULI3 1381 aa14.03□□□□□ -0.16
DDX56-212ENST00000485367 KCNQ3O43525 872 aa14.03□□□□□ -0.16
DDX56-212ENST00000485367 USPL1Q5W0Q7 1092 aa14.03□□□□□ -0.16
DDX56-212ENST00000485367 FMNL2Q96PY5 1086 aa14.03□□□□□ -0.16
DDX56-212ENST00000485367 GOLGB1Q14789 3259 aaKnown RBP14.02□□□□□ -0.16
DDX56-212ENST00000485367 HTATSF1O43719 755 aaKnown RBP14.02□□□□□ -0.16
DDX56-212ENST00000485367 TEX13AQ9BXU3 409 aaPredicted RBP14.02□□□□□ -0.16
DDX56-212ENST00000485367 ZNF784Q8NCA9 323 aaPredicted RBP14.01□□□□□ -0.17
DDX56-212ENST00000485367 COL15A1P39059 1388 aa14.01□□□□□ -0.17
DDX56-212ENST00000485367 KIF13BQ9NQT8 1826 aa14.01□□□□□ -0.17
DDX56-212ENST00000485367 A0A0G2JLW4 131 aa14.01□□□□□ -0.17
DDX56-212ENST00000485367 DDR1Q08345 913 aa14.01□□□□□ -0.17
DDX56-212ENST00000485367 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
DDX56-212ENST00000485367 DLG5Q8TDM6 1919 aa14.01□□□□□ -0.17
DDX56-212ENST00000485367 C10orf71Q711Q0 1435 aa14□□□□□ -0.17
DDX56-212ENST00000485367 N4BP2Q86UW6 1770 aaPredicted RBP14□□□□□ -0.17
DDX56-212ENST00000485367 TGFB2P61812 414 aa14□□□□□ -0.17
DDX56-212ENST00000485367 PLEKHF1Q96S99 279 aa14□□□□□ -0.17
DDX56-212ENST00000485367 PNNQ9H307 717 aaKnown RBP14□□□□□ -0.17
DDX56-212ENST00000485367 ZNF330Q9Y3S2 320 aaPredicted RBP14□□□□□ -0.17
DDX56-212ENST00000485367 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
DDX56-212ENST00000485367 UBE2Q2Q8WVN8 375 aa13.99□□□□□ -0.17
DDX56-212ENST00000485367 PXDNLA1KZ92 1463 aa13.99□□□□□ -0.17
DDX56-212ENST00000485367 A0A087WZG4 1122 aa13.99□□□□□ -0.17
DDX56-212ENST00000485367 A1BGP04217 495 aa13.99□□□□□ -0.17
DDX56-212ENST00000485367 DPEP1P16444 411 aa13.99□□□□□ -0.17
DDX56-212ENST00000485367 TM4SF1P30408 202 aa13.99□□□□□ -0.17
DDX56-212ENST00000485367 EIF5P55010 431 aaKnown RBP13.99□□□□□ -0.17
DDX56-212ENST00000485367 NFE2L2Q16236 605 aa13.99□□□□□ -0.17
DDX56-212ENST00000485367 MYBBP1AQ9BQG0 1328 aaKnown RBP13.98□□□□□ -0.17
DDX56-212ENST00000485367 KIAA1551Q9HCM1 1747 aa13.98□□□□□ -0.17
DDX56-212ENST00000485367 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
DDX56-212ENST00000485367 MIS18AQ9NYP9 233 aa13.98□□□□□ -0.17
DDX56-212ENST00000485367 POLRMTO00411 1230 aaKnown RBP13.97□□□□□ -0.17
DDX56-212ENST00000485367 NFIXQ14938 502 aa13.97□□□□□ -0.17
DDX56-212ENST00000485367 BCL2L12Q9HB09 334 aa13.97□□□□□ -0.17
DDX56-212ENST00000485367 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
DDX56-212ENST00000485367 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
DDX56-212ENST00000485367 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
DDX56-212ENST00000485367 IL6STP40189 918 aaPredicted RBP13.96□□□□□ -0.17
DDX56-212ENST00000485367 NPM2Q86SE8 214 aaKnown RBP13.96□□□□□ -0.17
DDX56-212ENST00000485367 TBC1D2BQ9UPU7 963 aa13.96□□□□□ -0.17
DDX56-212ENST00000485367 BCS1LQ9Y276 419 aa13.96□□□□□ -0.17
DDX56-212ENST00000485367 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
DDX56-212ENST00000485367 BICDL1Q6ZP65 573 aa13.96□□□□□ -0.18
DDX56-212ENST00000485367 THUMPD2Q9BTF0 503 aaKnown RBP13.96□□□□□ -0.18
DDX56-212ENST00000485367 PIP4K2AP48426 406 aaPredicted RBP13.95□□□□□ -0.18
DDX56-212ENST00000485367 AFDNP55196 1824 aaKnown RBP13.95□□□□□ -0.18
DDX56-212ENST00000485367 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
DDX56-212ENST00000485367 SERPINB2P05120 415 aa13.94□□□□□ -0.18
DDX56-212ENST00000485367 CHRNA5P30532 468 aa13.94□□□□□ -0.18
DDX56-212ENST00000485367 KCNA3P22001 575 aa13.93□□□□□ -0.18
DDX56-212ENST00000485367 RIPK4P57078 832 aa13.93□□□□□ -0.18
DDX56-212ENST00000485367 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
DDX56-212ENST00000485367 PIM2Q9P1W9 311 aa13.93□□□□□ -0.18
DDX56-212ENST00000485367 BRCA1P38398 1863 aaKnown RBP13.93□□□□□ -0.18
DDX56-212ENST00000485367 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
DDX56-212ENST00000485367 TBC1D9BQ66K14 1250 aa13.92□□□□□ -0.18
DDX56-212ENST00000485367 ARHGAP27Q6ZUM4 889 aa13.92□□□□□ -0.18
DDX56-212ENST00000485367 DZIP3Q86Y13 1208 aaKnown RBP13.92□□□□□ -0.18
DDX56-212ENST00000485367 CCDC146Q8IYE0 955 aa13.92□□□□□ -0.18
DDX56-212ENST00000485367 PRKRIP1Q9H875 184 aaPredicted RBP13.92□□□□□ -0.18
DDX56-212ENST00000485367 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
DDX56-212ENST00000485367 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
DDX56-212ENST00000485367 CAMTA2O94983 1202 aa13.91□□□□□ -0.18
DDX56-212ENST00000485367 DALRD3Q5D0E6 543 aaKnown RBP13.91□□□□□ -0.18
DDX56-212ENST00000485367 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
DDX56-212ENST00000485367 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
DDX56-212ENST00000485367 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
DDX56-212ENST00000485367 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
DDX56-212ENST00000485367 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
DDX56-212ENST00000485367 RRP7AQ9Y3A4 280 aaKnown RBP13.91□□□□□ -0.18
DDX56-212ENST00000485367 NRXN2Q9P2S2 1712 aa13.9□□□□□ -0.18
DDX56-212ENST00000485367 ATP10DQ9P241 1426 aa13.9□□□□□ -0.18
DDX56-212ENST00000485367 EIF4A1P60842 406 aaKnown RBP13.89□□□□□ -0.19
DDX56-212ENST00000485367 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
DDX56-212ENST00000485367 SETDB2Q96T68 719 aa13.89□□□□□ -0.19
DDX56-212ENST00000485367 ARFGEF1Q9Y6D6 1849 aa13.89□□□□□ -0.19
DDX56-212ENST00000485367 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
DDX56-212ENST00000485367 IRX6P78412 446 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms