RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ELL2O00472 640 aaPredicted RBP19.76■□□□□ 0.75
CCM2-215ENST00000482714 KRT24Q2M2I5 525 aa19.76■□□□□ 0.75
CCM2-215ENST00000482714 TSPYL6Q8N831 410 aa19.76■□□□□ 0.75
CCM2-215ENST00000482714 LINC00116Q8NCU8 138 aa19.76■□□□□ 0.75
CCM2-215ENST00000482714 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
CCM2-215ENST00000482714 CCDC87Q9NVE4 849 aa19.75■□□□□ 0.75
CCM2-215ENST00000482714 PRAMEF22A3QJZ6 481 aa19.74■□□□□ 0.75
CCM2-215ENST00000482714 RPS6KA4O75676 772 aa19.74■□□□□ 0.75
CCM2-215ENST00000482714 EIF2S2P20042 333 aaKnown RBP19.74■□□□□ 0.75
CCM2-215ENST00000482714 IL6STP40189 918 aaPredicted RBP19.74■□□□□ 0.75
CCM2-215ENST00000482714 CRKLP46109 303 aaKnown RBP19.74■□□□□ 0.75
CCM2-215ENST00000482714 KCNQ4P56696 695 aa19.74■□□□□ 0.75
CCM2-215ENST00000482714 HDGFL1Q5TGJ6 251 aa19.74■□□□□ 0.75
CCM2-215ENST00000482714 INTS5Q6P9B9 1019 aaKnown RBP19.74■□□□□ 0.75
CCM2-215ENST00000482714 FLAD1Q8NFF5 587 aa19.74■□□□□ 0.75
CCM2-215ENST00000482714 AKT1S1Q96B36 256 aa19.74■□□□□ 0.75
CCM2-215ENST00000482714 DBF4Q9UBU7 674 aaPredicted RBP19.74■□□□□ 0.75
CCM2-215ENST00000482714 SLC15A2Q16348 729 aa19.73■□□□□ 0.75
CCM2-215ENST00000482714 NPM2Q86SE8 214 aaKnown RBP19.73■□□□□ 0.75
CCM2-215ENST00000482714 AK7Q96M32 723 aa19.73■□□□□ 0.75
CCM2-215ENST00000482714 DDX21Q9NR30 783 aaKnown RBP eCLIP19.73■□□□□ 0.75
CCM2-215ENST00000482714 STK32BQ9NY57 414 aa19.73■□□□□ 0.75
CCM2-215ENST00000482714 RTCBQ9Y3I0 505 aaKnown RBP19.73■□□□□ 0.75
CCM2-215ENST00000482714 A1BGP04217 495 aa19.72■□□□□ 0.75
CCM2-215ENST00000482714 ADRA2BP18089 450 aa19.72■□□□□ 0.75
CCM2-215ENST00000482714 ALDH1L2Q3SY69 923 aa19.72■□□□□ 0.75
CCM2-215ENST00000482714 STK31Q9BXU1 1019 aa19.72■□□□□ 0.75
CCM2-215ENST00000482714 A0A087WZG4 1122 aa19.71■□□□□ 0.75
CCM2-215ENST00000482714 HYPKQ9NX55 129 aa19.71■□□□□ 0.75
CCM2-215ENST00000482714 C5P01031 1676 aa19.7■□□□□ 0.74
CCM2-215ENST00000482714 SSFA2P28290 1259 aa19.7■□□□□ 0.74
CCM2-215ENST00000482714 EIF5P55010 431 aaKnown RBP19.7■□□□□ 0.74
CCM2-215ENST00000482714 PDIA6Q15084 440 aa19.7■□□□□ 0.74
CCM2-215ENST00000482714 NBPF26B4DH59 902 aa19.69■□□□□ 0.74
CCM2-215ENST00000482714 TRAPPC3LQ5T215 181 aa19.69■□□□□ 0.74
CCM2-215ENST00000482714 NBPF10Q6P3W6 841 aaKnown RBP19.69■□□□□ 0.74
CCM2-215ENST00000482714 NBPF15Q8N660 670 aa19.69■□□□□ 0.74
CCM2-215ENST00000482714 TFCP2L1Q9NZI6 479 aa19.69■□□□□ 0.74
CCM2-215ENST00000482714 ZBTB1Q9Y2K1 713 aa19.69■□□□□ 0.74
CCM2-215ENST00000482714 GNPATO15228 680 aa19.68■□□□□ 0.74
CCM2-215ENST00000482714 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
CCM2-215ENST00000482714 BRPF1P55201 1214 aaPredicted RBP19.68■□□□□ 0.74
CCM2-215ENST00000482714 TAF1LQ8IZX4 1826 aa19.68■□□□□ 0.74
CCM2-215ENST00000482714 TJP1Q07157 1748 aa19.68■□□□□ 0.74
CCM2-215ENST00000482714 RGL2O15211 777 aa19.67■□□□□ 0.74
CCM2-215ENST00000482714 RREB1Q92766 1687 aa19.67■□□□□ 0.74
CCM2-215ENST00000482714 COL5A3P25940 1745 aaPredicted RBP19.67■□□□□ 0.74
CCM2-215ENST00000482714 SLC4A2P04920 1241 aa19.67■□□□□ 0.74
CCM2-215ENST00000482714 CHPF2Q9P2E5 772 aa19.67■□□□□ 0.74
CCM2-215ENST00000482714 C4BP0C0L5 1744 aa19.66■□□□□ 0.74
CCM2-215ENST00000482714 LRP10Q7Z4F1 713 aa19.66■□□□□ 0.74
CCM2-215ENST00000482714 MYH14Q7Z406 1995 aaKnown RBP19.65■□□□□ 0.74
CCM2-215ENST00000482714 ZNF827Q17R98 1081 aa19.65■□□□□ 0.74
CCM2-215ENST00000482714 NECTIN2Q92692 538 aa19.65■□□□□ 0.74
CCM2-215ENST00000482714 LAMB4A4D0S4 1761 aa19.64■□□□□ 0.73
CCM2-215ENST00000482714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.64■□□□□ 0.73
CCM2-215ENST00000482714 MYL6BP14649 208 aa19.64■□□□□ 0.73
CCM2-215ENST00000482714 RARSP54136 660 aaKnown RBP19.64■□□□□ 0.73
CCM2-215ENST00000482714 ARHGEF1Q92888 912 aaKnown RBP19.64■□□□□ 0.73
CCM2-215ENST00000482714 CACNA1FO60840 1977 aa19.63■□□□□ 0.73
CCM2-215ENST00000482714 RFC4P35249 363 aa19.63■□□□□ 0.73
CCM2-215ENST00000482714 SLC16A10Q8TF71 515 aa19.63■□□□□ 0.73
CCM2-215ENST00000482714 SSH1Q8WYL5 1049 aa19.63■□□□□ 0.73
CCM2-215ENST00000482714 ANO8Q9HCE9 1232 aaPredicted RBP19.63■□□□□ 0.73
CCM2-215ENST00000482714 ERVV-1B6SEH8 477 aa19.62■□□□□ 0.73
CCM2-215ENST00000482714 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
CCM2-215ENST00000482714 NARFQ9UHQ1 456 aa19.62■□□□□ 0.73
CCM2-215ENST00000482714 NUP188Q5SRE5 1749 aa19.61■□□□□ 0.73
CCM2-215ENST00000482714 DDX58O95786 925 aaKnown RBP19.61■□□□□ 0.73
CCM2-215ENST00000482714 CLEC4GQ6UXB4 293 aa19.61■□□□□ 0.73
CCM2-215ENST00000482714 COPS6Q7L5N1 327 aa19.61■□□□□ 0.73
CCM2-215ENST00000482714 COL15A1P39059 1388 aa19.61■□□□□ 0.73
CCM2-215ENST00000482714 ZPR1O75312 459 aa19.6■□□□□ 0.73
CCM2-215ENST00000482714 PROSER3Q2NL68 480 aa19.6■□□□□ 0.73
CCM2-215ENST00000482714 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
CCM2-215ENST00000482714 PNPLA7Q6ZV29 1317 aa19.6■□□□□ 0.73
CCM2-215ENST00000482714 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
CCM2-215ENST00000482714 ANKRD13DQ6ZTN6 518 aa19.6■□□□□ 0.73
CCM2-215ENST00000482714 COL23A1Q86Y22 540 aaPredicted RBP19.6■□□□□ 0.73
CCM2-215ENST00000482714 XAGE3Q8WTP9 111 aa19.6■□□□□ 0.73
CCM2-215ENST00000482714 SMC4Q9NTJ3 1288 aa19.6■□□□□ 0.73
CCM2-215ENST00000482714 RCAN3Q9UKA8 241 aa19.6■□□□□ 0.73
CCM2-215ENST00000482714 PTPRCP08575 1304 aa19.59■□□□□ 0.73
CCM2-215ENST00000482714 IPO8O15397 1037 aaKnown RBP19.59■□□□□ 0.73
CCM2-215ENST00000482714 ANXA1P04083 346 aa19.59■□□□□ 0.73
CCM2-215ENST00000482714 PIP4K2AP48426 406 aaPredicted RBP19.59■□□□□ 0.73
CCM2-215ENST00000482714 FLIIQ13045 1269 aa19.59■□□□□ 0.73
CCM2-215ENST00000482714 PLBD2Q8NHP8 589 aa19.59■□□□□ 0.73
CCM2-215ENST00000482714 ARHGAP45Q92619 1136 aa19.59■□□□□ 0.73
CCM2-215ENST00000482714 ZNF330Q9Y3S2 320 aaPredicted RBP19.59■□□□□ 0.73
CCM2-215ENST00000482714 MAP3K15Q6ZN16 1313 aa19.58■□□□□ 0.73
CCM2-215ENST00000482714 PSDA5PKW4 1024 aaPredicted RBP19.58■□□□□ 0.72
CCM2-215ENST00000482714 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.72
CCM2-215ENST00000482714 NLGN1Q8N2Q7 840 aa19.58■□□□□ 0.72
CCM2-215ENST00000482714 PHAXQ9H814 394 aaKnown RBP19.58■□□□□ 0.72
CCM2-215ENST00000482714 TBC1D2BQ9UPU7 963 aa19.58■□□□□ 0.72
CCM2-215ENST00000482714 PHF14O94880 888 aa19.57■□□□□ 0.72
CCM2-215ENST00000482714 AIMP1Q12904 312 aaKnown RBP19.57■□□□□ 0.72
CCM2-215ENST00000482714 KSR2Q6VAB6 950 aa19.57■□□□□ 0.72
CCM2-215ENST00000482714 AMIGO3Q86WK7 504 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms