RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 SPON1Q9HCB6 807 aa5.9□□□□□ -1.46
SHANK2-216ENST00000482659 CCDC87Q9NVE4 849 aa5.9□□□□□ -1.46
SHANK2-216ENST00000482659 HEG1Q9ULI3 1381 aa5.9□□□□□ -1.47
SHANK2-216ENST00000482659 RGPD1P0DJD0 1748 aa5.89□□□□□ -1.47
SHANK2-216ENST00000482659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.89□□□□□ -1.47
SHANK2-216ENST00000482659 PSDA5PKW4 1024 aaPredicted RBP5.89□□□□□ -1.47
SHANK2-216ENST00000482659 RGL2O15211 777 aa5.89□□□□□ -1.47
SHANK2-216ENST00000482659 ZNF853P0CG23 659 aa5.89□□□□□ -1.47
SHANK2-216ENST00000482659 POLD1P28340 1107 aa5.89□□□□□ -1.47
SHANK2-216ENST00000482659 IL6STP40189 918 aaPredicted RBP5.89□□□□□ -1.47
SHANK2-216ENST00000482659 CRKLP46109 303 aaKnown RBP5.89□□□□□ -1.47
SHANK2-216ENST00000482659 GOLGA2Q08379 1002 aa5.89□□□□□ -1.47
SHANK2-216ENST00000482659 INTS5Q6P9B9 1019 aaKnown RBP5.89□□□□□ -1.47
SHANK2-216ENST00000482659 SLC4A9Q96Q91 983 aa5.89□□□□□ -1.47
SHANK2-216ENST00000482659 ANO8Q9HCE9 1232 aaPredicted RBP5.89□□□□□ -1.47
SHANK2-216ENST00000482659 MIS18AQ9NYP9 233 aa5.89□□□□□ -1.47
SHANK2-216ENST00000482659 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
SHANK2-216ENST00000482659 E9PSI1 815 aa5.88□□□□□ -1.47
SHANK2-216ENST00000482659 KCNQ3O43525 872 aa5.88□□□□□ -1.47
SHANK2-216ENST00000482659 ZPR1O75312 459 aa5.88□□□□□ -1.47
SHANK2-216ENST00000482659 PHF14O94880 888 aa5.88□□□□□ -1.47
SHANK2-216ENST00000482659 CANXP27824 592 aaKnown RBP5.88□□□□□ -1.47
SHANK2-216ENST00000482659 VASPP50552 380 aaPredicted RBP5.88□□□□□ -1.47
SHANK2-216ENST00000482659 ZNF827Q17R98 1081 aa5.88□□□□□ -1.47
SHANK2-216ENST00000482659 COL23A1Q86Y22 540 aaPredicted RBP5.88□□□□□ -1.47
SHANK2-216ENST00000482659 ARHGEF1Q92888 912 aaKnown RBP5.88□□□□□ -1.47
SHANK2-216ENST00000482659 SALL2Q9Y467 1007 aaPredicted RBP5.88□□□□□ -1.47
SHANK2-216ENST00000482659 USP16Q9Y5T5 823 aa5.88□□□□□ -1.47
SHANK2-216ENST00000482659 MRC1P22897 1456 aa5.88□□□□□ -1.47
SHANK2-216ENST00000482659 PRR29P0C7W0 189 aa5.87□□□□□ -1.47
SHANK2-216ENST00000482659 EIF5P55010 431 aaKnown RBP5.87□□□□□ -1.47
SHANK2-216ENST00000482659 CCDC30Q5VVM6 783 aa5.87□□□□□ -1.47
SHANK2-216ENST00000482659 MBIPQ9NS73 344 aa5.87□□□□□ -1.47
SHANK2-216ENST00000482659 DBF4Q9UBU7 674 aaPredicted RBP5.87□□□□□ -1.47
SHANK2-216ENST00000482659 PPP1R1BQ9UD71 204 aaPredicted RBP5.87□□□□□ -1.47
SHANK2-216ENST00000482659 ZNF652Q9Y2D9 606 aa5.87□□□□□ -1.47
SHANK2-216ENST00000482659 PNPLA7Q6ZV29 1317 aa5.87□□□□□ -1.47
SHANK2-216ENST00000482659 MAP2P11137 1827 aaKnown RBP5.87□□□□□ -1.47
SHANK2-216ENST00000482659 PKD1L3Q7Z443 1732 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 ERVV-1B6SEH8 477 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 ZBTB7AO95365 584 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 A1BGP04217 495 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 EIF2S2P20042 333 aaKnown RBP5.86□□□□□ -1.47
SHANK2-216ENST00000482659 HDGFL1Q5TGJ6 251 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 DUSP27Q5VZP5 1158 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 CLEC4GQ6UXB4 293 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 ZNF428Q96B54 188 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 ARXQ96QS3 562 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 STK31Q9BXU1 1019 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 DDX21Q9NR30 783 aaKnown RBP eCLIP5.86□□□□□ -1.47
SHANK2-216ENST00000482659 HYPKQ9NX55 129 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 NARFQ9UHQ1 456 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 ZBTB1Q9Y2K1 713 aa5.86□□□□□ -1.47
SHANK2-216ENST00000482659 RGPD5Q99666 1765 aa5.85□□□□□ -1.47
SHANK2-216ENST00000482659 NHSQ6T4R5 1651 aa5.85□□□□□ -1.47
SHANK2-216ENST00000482659 ZNF521Q96K83 1311 aa5.85□□□□□ -1.47
SHANK2-216ENST00000482659 USP42Q9H9J4 1324 aaKnown RBP5.85□□□□□ -1.47
SHANK2-216ENST00000482659 CT47B1P0C2W7 299 aaPredicted RBP5.85□□□□□ -1.47
SHANK2-216ENST00000482659 HNRNPUQ00839 825 aaKnown RBP eCLIP5.85□□□□□ -1.47
SHANK2-216ENST00000482659 TWISTNBQ3B726 338 aaPredicted RBP5.85□□□□□ -1.47
SHANK2-216ENST00000482659 KIF6Q6ZMV9 814 aa5.85□□□□□ -1.47
SHANK2-216ENST00000482659 DZIP3Q86Y13 1208 aaKnown RBP5.85□□□□□ -1.47
SHANK2-216ENST00000482659 ZNF330Q9Y3S2 320 aaPredicted RBP5.85□□□□□ -1.47
SHANK2-216ENST00000482659 PARP3Q9Y6F1 533 aa5.85□□□□□ -1.47
SHANK2-216ENST00000482659 FANCIQ9NVI1 1328 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 PRAMEF22A3QJZ6 481 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 NBPF26B4DH59 902 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 ELL2O00472 640 aaPredicted RBP5.84□□□□□ -1.47
SHANK2-216ENST00000482659 DDX58O95786 925 aaKnown RBP5.84□□□□□ -1.47
SHANK2-216ENST00000482659 GYS1P13807 737 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 MYL6BP14649 208 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 SLFN5Q08AF3 891 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 HSP90AB3PQ58FF7 597 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 USPL1Q5W0Q7 1092 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 NBPF10Q6P3W6 841 aaKnown RBP5.84□□□□□ -1.47
SHANK2-216ENST00000482659 NBPF15Q8N660 670 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 C8orf58Q8NAV2 365 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 TSR2Q969E8 191 aaKnown RBP5.84□□□□□ -1.47
SHANK2-216ENST00000482659 SETDB2Q96T68 719 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 PDGFDQ9GZP0 370 aaPredicted RBP5.84□□□□□ -1.47
SHANK2-216ENST00000482659 CD2APQ9Y5K6 639 aa5.84□□□□□ -1.47
SHANK2-216ENST00000482659 COL15A1P39059 1388 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 MAP3K15Q6ZN16 1313 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 SENP3-EIF4A1A0A087X0R7 540 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 NPHP1O15259 732 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 VAMP4O75379 141 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 CAMTA2O94983 1202 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 MMP10P09238 476 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 TM4SF1P30408 202 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 PTGER2P43116 358 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 EXOSC9Q06265 439 aaKnown RBP5.83□□□□□ -1.48
SHANK2-216ENST00000482659 TPTE2Q6XPS3 522 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 ANKRD13DQ6ZTN6 518 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 COPS6Q7L5N1 327 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 PLCD3Q8N3E9 789 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 SGIP1Q9BQI5 828 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 CHPF2Q9P2E5 772 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 PDZRN3Q9UPQ7 1066 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 TBC1D2BQ9UPU7 963 aa5.83□□□□□ -1.48
SHANK2-216ENST00000482659 KCPQ6ZWJ8 1503 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms