RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 PHKA2P46019 1235 aa10.87□□□□□ -0.67
CLK1-212ENST00000482590 BEND7Q8N7W2 519 aaPredicted RBP10.87□□□□□ -0.67
CLK1-212ENST00000482590 FHDC1Q9C0D6 1143 aaPredicted RBP10.87□□□□□ -0.67
CLK1-212ENST00000482590 GPAMQ9HCL2 828 aa10.87□□□□□ -0.67
CLK1-212ENST00000482590 LRRC4BQ9NT99 713 aa10.87□□□□□ -0.67
CLK1-212ENST00000482590 TSGA10IPQ3SY00 556 aa10.86□□□□□ -0.67
CLK1-212ENST00000482590 DCAF5Q96JK2 942 aa10.86□□□□□ -0.67
CLK1-212ENST00000482590 ZSCAN10Q96SZ4 725 aaPredicted RBP10.86□□□□□ -0.67
CLK1-212ENST00000482590 CFHR5Q9BXR6 569 aa10.86□□□□□ -0.67
CLK1-212ENST00000482590 NSFL1CQ9UNZ2 370 aaKnown RBP10.86□□□□□ -0.67
CLK1-212ENST00000482590 TBC1D2BQ9UPU7 963 aa10.85□□□□□ -0.67
CLK1-212ENST00000482590 A0A1B0GTH6 734 aa10.84□□□□□ -0.67
CLK1-212ENST00000482590 OIP5O43482 229 aa10.84□□□□□ -0.67
CLK1-212ENST00000482590 UBAP2LQ14157 1087 aaKnown RBP10.84□□□□□ -0.67
CLK1-212ENST00000482590 PODNQ7Z5L7 613 aa10.84□□□□□ -0.67
CLK1-212ENST00000482590 PHTF2Q8N3S3 785 aa10.84□□□□□ -0.67
CLK1-212ENST00000482590 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
CLK1-212ENST00000482590 ITGB2P05107 769 aa10.83□□□□□ -0.68
CLK1-212ENST00000482590 PLA2G4EQ3MJ16 856 aa10.83□□□□□ -0.68
CLK1-212ENST00000482590 C4orf17Q53FE4 359 aa10.83□□□□□ -0.68
CLK1-212ENST00000482590 OXCT2Q9BYC2 517 aaPredicted RBP10.83□□□□□ -0.68
CLK1-212ENST00000482590 STAU1O95793 577 aaKnown RBP10.82□□□□□ -0.68
CLK1-212ENST00000482590 MAP2K3P46734 347 aa10.82□□□□□ -0.68
CLK1-212ENST00000482590 GNASQ5JWF2 1037 aa10.82□□□□□ -0.68
CLK1-212ENST00000482590 TMEM214Q6NUQ4 689 aaKnown RBP10.82□□□□□ -0.68
CLK1-212ENST00000482590 IRF5Q13568 498 aa10.81□□□□□ -0.68
CLK1-212ENST00000482590 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
CLK1-212ENST00000482590 RUBCNLQ9H714 662 aa10.81□□□□□ -0.68
CLK1-212ENST00000482590 ETNK1Q9HBU6 452 aa10.81□□□□□ -0.68
CLK1-212ENST00000482590 MSX1P28360 303 aa10.8□□□□□ -0.68
CLK1-212ENST00000482590 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLK1-212ENST00000482590 KLRG1Q96E93 195 aa10.8□□□□□ -0.68
CLK1-212ENST00000482590 DOLKQ9UPQ8 538 aa10.8□□□□□ -0.68
CLK1-212ENST00000482590 KIF27Q86VH2 1401 aa10.8□□□□□ -0.68
CLK1-212ENST00000482590 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
CLK1-212ENST00000482590 SHISA8B8ZZ34 492 aa10.79□□□□□ -0.68
CLK1-212ENST00000482590 GTF2E1P29083 439 aaPredicted RBP10.79□□□□□ -0.68
CLK1-212ENST00000482590 SNRPNP63162 240 aaKnown RBP10.79□□□□□ -0.68
CLK1-212ENST00000482590 USP4Q13107 963 aa10.79□□□□□ -0.68
CLK1-212ENST00000482590 LBRQ14739 615 aaKnown RBP10.79□□□□□ -0.68
CLK1-212ENST00000482590 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
CLK1-212ENST00000482590 PHF24Q9UPV7 400 aa10.79□□□□□ -0.68
CLK1-212ENST00000482590 MAPKBP1O60336 1514 aa10.79□□□□□ -0.68
CLK1-212ENST00000482590 TSPOAP1O95153 1857 aa10.78□□□□□ -0.68
CLK1-212ENST00000482590 DIP2BQ9P265 1576 aa10.78□□□□□ -0.68
CLK1-212ENST00000482590 MSTNO14793 375 aa10.78□□□□□ -0.68
CLK1-212ENST00000482590 SPOCK3Q9BQ16 436 aa10.78□□□□□ -0.68
CLK1-212ENST00000482590 CSB-PGBD3P0DP91 1061 aa10.77□□□□□ -0.69
CLK1-212ENST00000482590 SLFNL1Q499Z3 407 aa10.77□□□□□ -0.69
CLK1-212ENST00000482590 NPM2Q86SE8 214 aaKnown RBP10.77□□□□□ -0.69
CLK1-212ENST00000482590 PPARGC1BQ86YN6 1023 aaKnown RBP10.77□□□□□ -0.69
CLK1-212ENST00000482590 RNF135Q8IUD6 432 aa10.77□□□□□ -0.69
CLK1-212ENST00000482590 PGBD3Q8N328 593 aa10.77□□□□□ -0.69
CLK1-212ENST00000482590 GALNT6Q8NCL4 622 aa10.77□□□□□ -0.69
CLK1-212ENST00000482590 RHBDD1Q8TEB9 315 aa10.77□□□□□ -0.69
CLK1-212ENST00000482590 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
CLK1-212ENST00000482590 KIAA0586Q9BVV6 1533 aa10.77□□□□□ -0.69
CLK1-212ENST00000482590 C2CD2LO14523 706 aa10.75□□□□□ -0.69
CLK1-212ENST00000482590 TLR1Q15399 786 aa10.75□□□□□ -0.69
CLK1-212ENST00000482590 OXLD1Q5BKU9 147 aa10.75□□□□□ -0.69
CLK1-212ENST00000482590 ABHD17AQ96GS6 310 aa10.75□□□□□ -0.69
CLK1-212ENST00000482590 PRM3Q9NNZ6 103 aa10.75□□□□□ -0.69
CLK1-212ENST00000482590 NDFIP2Q9NV92 336 aa10.75□□□□□ -0.69
CLK1-212ENST00000482590 ATXN7L1Q9ULK2 861 aaPredicted RBP10.75□□□□□ -0.69
CLK1-212ENST00000482590 IQGAP2Q13576 1575 aa10.74□□□□□ -0.69
CLK1-212ENST00000482590 CTTNBP2Q8WZ74 1663 aa10.74□□□□□ -0.69
CLK1-212ENST00000482590 PROCP04070 461 aa10.74□□□□□ -0.69
CLK1-212ENST00000482590 VAC14Q08AM6 782 aa10.74□□□□□ -0.69
CLK1-212ENST00000482590 EFHC2Q5JST6 749 aa10.74□□□□□ -0.69
CLK1-212ENST00000482590 GDF2Q9UK05 429 aaPredicted RBP10.74□□□□□ -0.69
CLK1-212ENST00000482590 BNIP3LO60238 219 aa10.73□□□□□ -0.69
CLK1-212ENST00000482590 SCNN1DP51172 638 aa10.73□□□□□ -0.69
CLK1-212ENST00000482590 EDARADDQ8WWZ3 215 aa10.73□□□□□ -0.69
CLK1-212ENST00000482590 CRISPLD1Q9H336 500 aa10.73□□□□□ -0.69
CLK1-212ENST00000482590 ABCC10Q5T3U5 1492 aa10.73□□□□□ -0.69
CLK1-212ENST00000482590 KDM6BO15054 1643 aa10.73□□□□□ -0.69
CLK1-212ENST00000482590 BMP4P12644 408 aa10.72□□□□□ -0.69
CLK1-212ENST00000482590 CTBSQ01459 385 aa10.72□□□□□ -0.69
CLK1-212ENST00000482590 INHAP05111 366 aa10.71□□□□□ -0.69
CLK1-212ENST00000482590 FGFR3P22607 806 aa10.71□□□□□ -0.69
CLK1-212ENST00000482590 PLA2G4AP47712 749 aa10.71□□□□□ -0.69
CLK1-212ENST00000482590 GOLGA6L1Q8N7Z2 621 aa10.71□□□□□ -0.69
CLK1-212ENST00000482590 SIRT1Q96EB6 747 aa10.71□□□□□ -0.69
CLK1-212ENST00000482590 MKL2Q9ULH7 1088 aa10.71□□□□□ -0.69
CLK1-212ENST00000482590 HOXB4P17483 251 aaPredicted RBP10.7□□□□□ -0.7
CLK1-212ENST00000482590 GDF10P55107 478 aa10.7□□□□□ -0.7
CLK1-212ENST00000482590 GDPD2Q9HCC8 539 aa10.7□□□□□ -0.7
CLK1-212ENST00000482590 DNAAF2Q9NVR5 837 aaKnown RBP10.7□□□□□ -0.7
CLK1-212ENST00000482590 KRBA1A5PL33 1030 aa10.69□□□□□ -0.7
CLK1-212ENST00000482590 ADAM23O75077 832 aa10.69□□□□□ -0.7
CLK1-212ENST00000482590 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
CLK1-212ENST00000482590 RRAGCQ9HB90 399 aa10.69□□□□□ -0.7
CLK1-212ENST00000482590 GGA1Q9UJY5 639 aa10.69□□□□□ -0.7
CLK1-212ENST00000482590 CARMIL2Q6F5E8 1435 aa10.68□□□□□ -0.7
CLK1-212ENST00000482590 CARMIL1Q5VZK9 1371 aa10.68□□□□□ -0.7
CLK1-212ENST00000482590 ATP4AP20648 1035 aa10.68□□□□□ -0.7
CLK1-212ENST00000482590 COL8A1P27658 744 aa10.68□□□□□ -0.7
CLK1-212ENST00000482590 SLCO4C1Q6ZQN7 724 aa10.68□□□□□ -0.7
CLK1-212ENST00000482590 TRIM26Q12899 539 aaPredicted RBP10.67□□□□□ -0.7
CLK1-212ENST00000482590 MAP7D1Q3KQU3 841 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms