RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 MCM10Q7L590 875 aa30.21■■■□□ 2.43
CYTH3-208ENST00000482460 FMNL2Q96PY5 1086 aa30.21■■■□□ 2.43
CYTH3-208ENST00000482460 TGFB2P61812 414 aa30.2■■■□□ 2.43
CYTH3-208ENST00000482460 ZNF784Q8NCA9 323 aaPredicted RBP30.2■■■□□ 2.43
CYTH3-208ENST00000482460 COL15A1P39059 1388 aa30.19■■■□□ 2.42
CYTH3-208ENST00000482460 USPL1Q5W0Q7 1092 aa30.19■■■□□ 2.42
CYTH3-208ENST00000482460 NARFQ9UHQ1 456 aa30.19■■■□□ 2.42
CYTH3-208ENST00000482460 KCNQ3O43525 872 aa30.18■■■□□ 2.42
CYTH3-208ENST00000482460 CANXP27824 592 aaKnown RBP30.18■■■□□ 2.42
CYTH3-208ENST00000482460 PLEKHF1Q96S99 279 aa30.18■■■□□ 2.42
CYTH3-208ENST00000482460 C10orf71Q711Q0 1435 aa30.18■■■□□ 2.42
CYTH3-208ENST00000482460 DCTN1Q14203 1278 aa30.17■■■□□ 2.42
CYTH3-208ENST00000482460 PNNQ9H307 717 aaKnown RBP30.17■■■□□ 2.42
CYTH3-208ENST00000482460 TM4SF1P30408 202 aa30.16■■■□□ 2.42
CYTH3-208ENST00000482460 PXDNLA1KZ92 1463 aa30.15■■■□□ 2.42
CYTH3-208ENST00000482460 EIF5P55010 431 aaKnown RBP30.15■■■□□ 2.42
CYTH3-208ENST00000482460 DDR1Q08345 913 aa30.15■■■□□ 2.42
CYTH3-208ENST00000482460 WWC3Q9ULE0 1092 aa30.14■■■□□ 2.42
CYTH3-208ENST00000482460 KIAA1551Q9HCM1 1747 aa30.13■■■□□ 2.41
CYTH3-208ENST00000482460 N4BP2Q86UW6 1770 aaPredicted RBP30.13■■■□□ 2.41
CYTH3-208ENST00000482460 DLG5Q8TDM6 1919 aa30.13■■■□□ 2.41
CYTH3-208ENST00000482460 A0A087WZG4 1122 aa30.12■■■□□ 2.41
CYTH3-208ENST00000482460 A0A0G2JLW4 131 aa30.12■■■□□ 2.41
CYTH3-208ENST00000482460 POLRMTO00411 1230 aaKnown RBP30.12■■■□□ 2.41
CYTH3-208ENST00000482460 TAF7Q15545 349 aaPredicted RBP30.12■■■□□ 2.41
CYTH3-208ENST00000482460 BCL2L12Q9HB09 334 aa30.11■■■□□ 2.41
CYTH3-208ENST00000482460 NFE2L2Q16236 605 aa30.1■■■□□ 2.41
CYTH3-208ENST00000482460 MYBBP1AQ9BQG0 1328 aaKnown RBP30.1■■■□□ 2.41
CYTH3-208ENST00000482460 A1BGP04217 495 aa30.09■■■□□ 2.41
CYTH3-208ENST00000482460 DPEP1P16444 411 aa30.09■■■□□ 2.41
CYTH3-208ENST00000482460 IL6STP40189 918 aaPredicted RBP30.09■■■□□ 2.41
CYTH3-208ENST00000482460 USP16Q9Y5T5 823 aa30.09■■■□□ 2.41
CYTH3-208ENST00000482460 MAPK8IP3Q9UPT6 1336 aa30.08■■■□□ 2.41
CYTH3-208ENST00000482460 SNRPA1P09661 255 aaKnown RBP30.08■■■□□ 2.41
CYTH3-208ENST00000482460 NFIXQ14938 502 aa30.08■■■□□ 2.41
CYTH3-208ENST00000482460 NPM2Q86SE8 214 aaKnown RBP30.05■■■□□ 2.4
CYTH3-208ENST00000482460 ZNF330Q9Y3S2 320 aaPredicted RBP30.05■■■□□ 2.4
CYTH3-208ENST00000482460 PRAMEF22A3QJZ6 481 aa30.04■■■□□ 2.4
CYTH3-208ENST00000482460 KCNA3P22001 575 aa30.04■■■□□ 2.4
CYTH3-208ENST00000482460 PNISRQ8TF01 805 aaKnown RBP30.04■■■□□ 2.4
CYTH3-208ENST00000482460 BCS1LQ9Y276 419 aa30.04■■■□□ 2.4
CYTH3-208ENST00000482460 AFDNP55196 1824 aaKnown RBP30.03■■■□□ 2.4
CYTH3-208ENST00000482460 MIS18AQ9NYP9 233 aa30.03■■■□□ 2.4
CYTH3-208ENST00000482460 TBC1D2BQ9UPU7 963 aa30.03■■■□□ 2.4
CYTH3-208ENST00000482460 BRCA1P38398 1863 aaKnown RBP30.03■■■□□ 2.4
CYTH3-208ENST00000482460 SERPINB2P05120 415 aa30.02■■■□□ 2.4
CYTH3-208ENST00000482460 ZEB1P37275 1124 aaPredicted RBP30.01■■■□□ 2.39
CYTH3-208ENST00000482460 PIM2Q9P1W9 311 aa30.01■■■□□ 2.39
CYTH3-208ENST00000482460 NRXN2Q9P2S2 1712 aa30.01■■■□□ 2.39
CYTH3-208ENST00000482460 BICDL1Q6ZP65 573 aa29.99■■■□□ 2.39
CYTH3-208ENST00000482460 TBC1D9BQ66K14 1250 aa29.98■■■□□ 2.39
CYTH3-208ENST00000482460 THUMPD2Q9BTF0 503 aaKnown RBP29.98■■■□□ 2.39
CYTH3-208ENST00000482460 SCN7AQ01118 1682 aa29.98■■■□□ 2.39
CYTH3-208ENST00000482460 CAMTA2O94983 1202 aa29.97■■■□□ 2.39
CYTH3-208ENST00000482460 PIP4K2AP48426 406 aaPredicted RBP29.97■■■□□ 2.39
CYTH3-208ENST00000482460 DZIP3Q86Y13 1208 aaKnown RBP29.97■■■□□ 2.39
CYTH3-208ENST00000482460 PRKRIP1Q9H875 184 aaPredicted RBP29.97■■■□□ 2.39
CYTH3-208ENST00000482460 KDM3BQ7LBC6 1761 aa29.97■■■□□ 2.39
CYTH3-208ENST00000482460 CHRNA5P30532 468 aa29.96■■■□□ 2.39
CYTH3-208ENST00000482460 RIPK4P57078 832 aa29.96■■■□□ 2.39
CYTH3-208ENST00000482460 ARFGEF1Q9Y6D6 1849 aa29.94■■■□□ 2.38
CYTH3-208ENST00000482460 TMPOP42166 694 aaKnown RBP29.94■■■□□ 2.38
CYTH3-208ENST00000482460 EIF4A1P60842 406 aaKnown RBP29.94■■■□□ 2.38
CYTH3-208ENST00000482460 DALRD3Q5D0E6 543 aaKnown RBP29.94■■■□□ 2.38
CYTH3-208ENST00000482460 ADCY9O60503 1353 aa29.93■■■□□ 2.38
CYTH3-208ENST00000482460 WDR43Q15061 677 aaKnown RBP eCLIP29.93■■■□□ 2.38
CYTH3-208ENST00000482460 ARHGAP27Q6ZUM4 889 aa29.93■■■□□ 2.38
CYTH3-208ENST00000482460 NBPF26B4DH59 902 aa29.92■■■□□ 2.38
CYTH3-208ENST00000482460 GIGYF1O75420 1035 aaPredicted RBP29.92■■■□□ 2.38
CYTH3-208ENST00000482460 NBPF10Q6P3W6 841 aaKnown RBP29.92■■■□□ 2.38
CYTH3-208ENST00000482460 NBPF15Q8N660 670 aa29.92■■■□□ 2.38
CYTH3-208ENST00000482460 ATP10DQ9P241 1426 aa29.92■■■□□ 2.38
CYTH3-208ENST00000482460 BCORQ6W2J9 1755 aa29.91■■■□□ 2.38
CYTH3-208ENST00000482460 LMOD3Q0VAK6 560 aa29.91■■■□□ 2.38
CYTH3-208ENST00000482460 SETDB2Q96T68 719 aa29.91■■■□□ 2.38
CYTH3-208ENST00000482460 CARMIL3Q8ND23 1372 aa29.9■■■□□ 2.38
CYTH3-208ENST00000482460 CLEC4GQ6UXB4 293 aa29.9■■■□□ 2.38
CYTH3-208ENST00000482460 LAMB4A4D0S4 1761 aa29.9■■■□□ 2.38
CYTH3-208ENST00000482460 CCDC146Q8IYE0 955 aa29.89■■■□□ 2.38
CYTH3-208ENST00000482460 RUNDC1Q96C34 613 aa29.89■■■□□ 2.38
CYTH3-208ENST00000482460 ADAMTS8Q9UP79 889 aa29.88■■■□□ 2.37
CYTH3-208ENST00000482460 TSPYL4Q9UJ04 414 aa29.87■■■□□ 2.37
CYTH3-208ENST00000482460 ZNF652Q9Y2D9 606 aa29.87■■■□□ 2.37
CYTH3-208ENST00000482460 RGL2O15211 777 aa29.86■■■□□ 2.37
CYTH3-208ENST00000482460 PRR5LQ6MZQ0 368 aa29.86■■■□□ 2.37
CYTH3-208ENST00000482460 BABAM1Q9NWV8 329 aa29.86■■■□□ 2.37
CYTH3-208ENST00000482460 H0YIN7 160 aa29.85■■■□□ 2.37
CYTH3-208ENST00000482460 C2CD5Q86YS7 1000 aa29.85■■■□□ 2.37
CYTH3-208ENST00000482460 BRIP1Q9BX63 1249 aa29.85■■■□□ 2.37
CYTH3-208ENST00000482460 RRP7AQ9Y3A4 280 aaKnown RBP29.85■■■□□ 2.37
CYTH3-208ENST00000482460 DLEC1Q9Y238 1755 aa29.85■■■□□ 2.37
CYTH3-208ENST00000482460 C1QTNF8P60827 252 aa29.84■■■□□ 2.37
CYTH3-208ENST00000482460 NEUROD2Q15784 382 aa29.84■■■□□ 2.37
CYTH3-208ENST00000482460 GPBP1L1Q9HC44 474 aaPredicted RBP29.84■■■□□ 2.37
CYTH3-208ENST00000482460 PDZRN3Q9UPQ7 1066 aa29.84■■■□□ 2.37
CYTH3-208ENST00000482460 ANKRD31Q8N7Z5 1873 aa29.83■■■□□ 2.37
CYTH3-208ENST00000482460 PDE6BP35913 854 aa29.83■■■□□ 2.37
CYTH3-208ENST00000482460 TTLL6Q8N841 843 aa29.82■■■□□ 2.36
CYTH3-208ENST00000482460 CNBD1Q8NA66 436 aa29.82■■■□□ 2.36
CYTH3-208ENST00000482460 NPHP1O15259 732 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms