RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 KCNA3P22001 575 aa13□□□□□ -0.33
TMEM39A-207ENST00000482162 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
TMEM39A-207ENST00000482162 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
TMEM39A-207ENST00000482162 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
TMEM39A-207ENST00000482162 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
TMEM39A-207ENST00000482162 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
TMEM39A-207ENST00000482162 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
TMEM39A-207ENST00000482162 KCNQ3O43525 872 aa12.98□□□□□ -0.33
TMEM39A-207ENST00000482162 DPEP1P16444 411 aa12.98□□□□□ -0.33
TMEM39A-207ENST00000482162 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
TMEM39A-207ENST00000482162 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
TMEM39A-207ENST00000482162 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
TMEM39A-207ENST00000482162 ADCY9O60503 1353 aa12.97□□□□□ -0.33
TMEM39A-207ENST00000482162 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
TMEM39A-207ENST00000482162 ZPR1O75312 459 aa12.97□□□□□ -0.33
TMEM39A-207ENST00000482162 NFIXQ14938 502 aa12.97□□□□□ -0.33
TMEM39A-207ENST00000482162 COL15A1P39059 1388 aa12.96□□□□□ -0.33
TMEM39A-207ENST00000482162 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.33
TMEM39A-207ENST00000482162 IL6STP40189 918 aaPredicted RBP12.96□□□□□ -0.33
TMEM39A-207ENST00000482162 RALBP1Q15311 655 aa12.96□□□□□ -0.33
TMEM39A-207ENST00000482162 MCM10Q7L590 875 aa12.96□□□□□ -0.33
TMEM39A-207ENST00000482162 A0A087WZG4 1122 aa12.95□□□□□ -0.34
TMEM39A-207ENST00000482162 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
TMEM39A-207ENST00000482162 TAF7Q15545 349 aaPredicted RBP12.95□□□□□ -0.34
TMEM39A-207ENST00000482162 RTF1Q92541 710 aaKnown RBP12.95□□□□□ -0.34
TMEM39A-207ENST00000482162 USP16Q9Y5T5 823 aa12.95□□□□□ -0.34
TMEM39A-207ENST00000482162 A1BGP04217 495 aa12.94□□□□□ -0.34
TMEM39A-207ENST00000482162 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
TMEM39A-207ENST00000482162 C1QTNF8P60827 252 aa12.93□□□□□ -0.34
TMEM39A-207ENST00000482162 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
TMEM39A-207ENST00000482162 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
TMEM39A-207ENST00000482162 BRCA1P38398 1863 aaKnown RBP12.93□□□□□ -0.34
TMEM39A-207ENST00000482162 RGL2O15211 777 aa12.92□□□□□ -0.34
TMEM39A-207ENST00000482162 SERPINB2P05120 415 aa12.92□□□□□ -0.34
TMEM39A-207ENST00000482162 NFE2L2Q16236 605 aa12.92□□□□□ -0.34
TMEM39A-207ENST00000482162 ATP10DQ9P241 1426 aa12.92□□□□□ -0.34
TMEM39A-207ENST00000482162 NRXN2Q9P2S2 1712 aa12.92□□□□□ -0.34
TMEM39A-207ENST00000482162 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
TMEM39A-207ENST00000482162 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
TMEM39A-207ENST00000482162 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
TMEM39A-207ENST00000482162 PRAMEF22A3QJZ6 481 aa12.91□□□□□ -0.34
TMEM39A-207ENST00000482162 CAMTA2O94983 1202 aa12.91□□□□□ -0.34
TMEM39A-207ENST00000482162 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
TMEM39A-207ENST00000482162 PNNQ9H307 717 aaKnown RBP12.91□□□□□ -0.34
TMEM39A-207ENST00000482162 NBPF26B4DH59 902 aa12.9□□□□□ -0.34
TMEM39A-207ENST00000482162 CHRNA5P30532 468 aa12.9□□□□□ -0.34
TMEM39A-207ENST00000482162 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.34
TMEM39A-207ENST00000482162 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
TMEM39A-207ENST00000482162 NBPF10Q6P3W6 841 aaKnown RBP12.9□□□□□ -0.34
TMEM39A-207ENST00000482162 NBPF15Q8N660 670 aa12.9□□□□□ -0.34
TMEM39A-207ENST00000482162 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
TMEM39A-207ENST00000482162 CLEC4GQ6UXB4 293 aa12.89□□□□□ -0.35
TMEM39A-207ENST00000482162 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
TMEM39A-207ENST00000482162 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 NEFMP07197 916 aa12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 ARHGAP27Q6ZUM4 889 aa12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 BRIP1Q9BX63 1249 aa12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 ARFGEF1Q9Y6D6 1849 aa12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
TMEM39A-207ENST00000482162 DZIP3Q86Y13 1208 aaKnown RBP12.87□□□□□ -0.35
TMEM39A-207ENST00000482162 PDZRN3Q9UPQ7 1066 aa12.87□□□□□ -0.35
TMEM39A-207ENST00000482162 CARMIL3Q8ND23 1372 aa12.86□□□□□ -0.35
TMEM39A-207ENST00000482162 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
TMEM39A-207ENST00000482162 SETDB2Q96T68 719 aa12.86□□□□□ -0.35
TMEM39A-207ENST00000482162 THUMPD2Q9BTF0 503 aaKnown RBP12.86□□□□□ -0.35
TMEM39A-207ENST00000482162 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
TMEM39A-207ENST00000482162 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
TMEM39A-207ENST00000482162 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
TMEM39A-207ENST00000482162 KLRG2A4D1S0 409 aaPredicted RBP12.85□□□□□ -0.35
TMEM39A-207ENST00000482162 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
TMEM39A-207ENST00000482162 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
TMEM39A-207ENST00000482162 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
TMEM39A-207ENST00000482162 SCN7AQ01118 1682 aa12.85□□□□□ -0.35
TMEM39A-207ENST00000482162 H0YIN7 160 aa12.84□□□□□ -0.35
TMEM39A-207ENST00000482162 KIF3CO14782 793 aa12.84□□□□□ -0.35
TMEM39A-207ENST00000482162 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
TMEM39A-207ENST00000482162 TTLL6Q8N841 843 aa12.84□□□□□ -0.35
TMEM39A-207ENST00000482162 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
TMEM39A-207ENST00000482162 ERVV-1B6SEH8 477 aa12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 PDE6BP35913 854 aa12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 RIPK4P57078 832 aa12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 C9orf131Q5VYM1 1079 aa12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 KDM3BQ7LBC6 1761 aa12.83□□□□□ -0.36
TMEM39A-207ENST00000482162 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
TMEM39A-207ENST00000482162 PRELPP51888 382 aa12.82□□□□□ -0.36
TMEM39A-207ENST00000482162 LRP10Q7Z4F1 713 aa12.82□□□□□ -0.36
TMEM39A-207ENST00000482162 ZNF526Q8TF50 670 aaPredicted RBP12.82□□□□□ -0.36
TMEM39A-207ENST00000482162 ZNF652Q9Y2D9 606 aa12.82□□□□□ -0.36
TMEM39A-207ENST00000482162 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
TMEM39A-207ENST00000482162 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
TMEM39A-207ENST00000482162 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 CHL1O00533 1208 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 SRGNP10124 158 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 335.7 ms