RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 LRRFIP2Q9Y608 721 aaKnown RBP24.62■■□□□ 1.53
CHKB-209ENST00000481673 SLC39A6Q13433 755 aa24.61■■□□□ 1.53
CHKB-209ENST00000481673 SSH3Q8TE77 659 aa24.6■■□□□ 1.53
CHKB-209ENST00000481673 ZNF496Q96IT1 587 aaPredicted RBP24.6■■□□□ 1.53
CHKB-209ENST00000481673 OSBPL3Q9H4L5 887 aa24.6■■□□□ 1.53
CHKB-209ENST00000481673 PDIA6Q15084 440 aa24.59■■□□□ 1.53
CHKB-209ENST00000481673 LINS1Q8NG48 757 aa24.59■■□□□ 1.53
CHKB-209ENST00000481673 C22orf23Q9BZE7 217 aa24.59■■□□□ 1.53
CHKB-209ENST00000481673 LRRCC1Q9C099 1032 aa24.59■■□□□ 1.53
CHKB-209ENST00000481673 MAP3K2Q9Y2U5 619 aa24.59■■□□□ 1.53
CHKB-209ENST00000481673 RAB11FIP3O75154 756 aa24.58■■□□□ 1.53
CHKB-209ENST00000481673 TTC22Q5TAA0 569 aa24.58■■□□□ 1.53
CHKB-209ENST00000481673 ERBB4Q15303 1308 aa24.58■■□□□ 1.52
CHKB-209ENST00000481673 LARP1Q6PKG0 1096 aaKnown RBP24.58■■□□□ 1.52
CHKB-209ENST00000481673 STRN4Q9NRL3 753 aa24.58■■□□□ 1.52
CHKB-209ENST00000481673 AHDC1Q5TGY3 1603 aaPredicted RBP24.57■■□□□ 1.52
CHKB-209ENST00000481673 CDC45O75419 566 aa24.57■■□□□ 1.52
CHKB-209ENST00000481673 ANXA1P04083 346 aa24.57■■□□□ 1.52
CHKB-209ENST00000481673 HSP90AB4PQ58FF6 505 aa24.57■■□□□ 1.52
CHKB-209ENST00000481673 PRAMEF22A3QJZ6 481 aa24.56■■□□□ 1.52
CHKB-209ENST00000481673 MFAP1P55081 439 aaKnown RBP24.56■■□□□ 1.52
CHKB-209ENST00000481673 POLA2Q14181 598 aa24.56■■□□□ 1.52
CHKB-209ENST00000481673 PROSER3Q2NL68 480 aa24.56■■□□□ 1.52
CHKB-209ENST00000481673 PNMA6EA0A0J9YXQ4 647 aa24.55■■□□□ 1.52
CHKB-209ENST00000481673 MTX1Q13505 466 aa24.55■■□□□ 1.52
CHKB-209ENST00000481673 C9orf78Q9NZ63 289 aaPredicted RBP24.55■■□□□ 1.52
CHKB-209ENST00000481673 NEXNQ0ZGT2 675 aa24.54■■□□□ 1.52
CHKB-209ENST00000481673 RBM25P49756 843 aaKnown RBP24.53■■□□□ 1.52
CHKB-209ENST00000481673 MYT1Q01538 1121 aa24.53■■□□□ 1.52
CHKB-209ENST00000481673 NBPF7P0C2Y1 421 aaPredicted RBP24.53■■□□□ 1.52
CHKB-209ENST00000481673 CASC1Q6TDU7 716 aa24.53■■□□□ 1.52
CHKB-209ENST00000481673 PPP1R42Q7Z4L9 355 aa24.53■■□□□ 1.52
CHKB-209ENST00000481673 RIC3Q7Z5B4 369 aa24.53■■□□□ 1.52
CHKB-209ENST00000481673 C16orf71Q8IYS4 520 aaPredicted RBP24.53■■□□□ 1.52
CHKB-209ENST00000481673 BTG4Q9NY30 223 aa24.53■■□□□ 1.52
CHKB-209ENST00000481673 UTYO14607 1347 aa24.52■■□□□ 1.52
CHKB-209ENST00000481673 GSPT1P15170 499 aaKnown RBP24.52■■□□□ 1.52
CHKB-209ENST00000481673 EXOC6BQ9Y2D4 811 aa24.52■■□□□ 1.52
CHKB-209ENST00000481673 TBC1D9Q6ZT07 1266 aa24.51■■□□□ 1.51
CHKB-209ENST00000481673 APBB1O00213 710 aa24.51■■□□□ 1.51
CHKB-209ENST00000481673 SMARCA5O60264 1052 aaPredicted RBP24.51■■□□□ 1.51
CHKB-209ENST00000481673 USP16Q9Y5T5 823 aa24.51■■□□□ 1.51
CHKB-209ENST00000481673 SRGAP3O43295 1099 aa24.5■■□□□ 1.51
CHKB-209ENST00000481673 PDE1AP54750 535 aa24.5■■□□□ 1.51
CHKB-209ENST00000481673 LTBP4Q8N2S1 1624 aa24.5■■□□□ 1.51
CHKB-209ENST00000481673 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
CHKB-209ENST00000481673 COL22A1Q8NFW1 1626 aaPredicted RBP24.49■■□□□ 1.51
CHKB-209ENST00000481673 ANKRD13DQ6ZTN6 518 aa24.49■■□□□ 1.51
CHKB-209ENST00000481673 COL14A1Q05707 1796 aaKnown RBP24.49■■□□□ 1.51
CHKB-209ENST00000481673 GRM8O00222 908 aa24.49■■□□□ 1.51
CHKB-209ENST00000481673 AIMP1Q12904 312 aaKnown RBP24.49■■□□□ 1.51
CHKB-209ENST00000481673 COPS6Q7L5N1 327 aa24.49■■□□□ 1.51
CHKB-209ENST00000481673 DDX54Q8TDD1 881 aaKnown RBP24.49■■□□□ 1.51
CHKB-209ENST00000481673 METTL22Q9BUU2 404 aaPredicted RBP24.49■■□□□ 1.51
CHKB-209ENST00000481673 AOX1Q06278 1338 aa24.49■■□□□ 1.51
CHKB-209ENST00000481673 XAGE3Q8WTP9 111 aa24.48■■□□□ 1.51
CHKB-209ENST00000481673 KIF1BPQ96EK5 621 aa24.48■■□□□ 1.51
CHKB-209ENST00000481673 STAP2Q9UGK3 403 aa24.48■■□□□ 1.51
CHKB-209ENST00000481673 SURF6O75683 361 aaKnown RBP24.47■■□□□ 1.51
CHKB-209ENST00000481673 MYL6BP14649 208 aa24.47■■□□□ 1.51
CHKB-209ENST00000481673 LRP10Q7Z4F1 713 aa24.47■■□□□ 1.51
CHKB-209ENST00000481673 SALL3Q9BXA9 1300 aa24.47■■□□□ 1.51
CHKB-209ENST00000481673 OTUD7AQ8TE49 926 aaPredicted RBP24.46■■□□□ 1.51
CHKB-209ENST00000481673 SDSP20132 328 aa24.45■■□□□ 1.51
CHKB-209ENST00000481673 MX1P20591 662 aa24.45■■□□□ 1.51
CHKB-209ENST00000481673 ERC1Q8IUD2 1116 aa24.45■■□□□ 1.5
CHKB-209ENST00000481673 CDCA7Q9BWT1 371 aaPredicted RBP24.45■■□□□ 1.5
CHKB-209ENST00000481673 TEX13AQ9BXU3 409 aaPredicted RBP24.45■■□□□ 1.5
CHKB-209ENST00000481673 CWF19L2Q2TBE0 894 aaKnown RBP24.44■■□□□ 1.5
CHKB-209ENST00000481673 C5P01031 1676 aa24.44■■□□□ 1.5
CHKB-209ENST00000481673 PLBD2Q8NHP8 589 aa24.43■■□□□ 1.5
CHKB-209ENST00000481673 TMOD3Q9NYL9 352 aa24.43■■□□□ 1.5
CHKB-209ENST00000481673 NEURL1BA8MQ27 555 aa24.43■■□□□ 1.5
CHKB-209ENST00000481673 RHPN1Q8TCX5 695 aa24.43■■□□□ 1.5
CHKB-209ENST00000481673 TNS2Q63HR2 1409 aa24.42■■□□□ 1.5
CHKB-209ENST00000481673 TOM1O60784 492 aa24.42■■□□□ 1.5
CHKB-209ENST00000481673 IGKV5-2P06315 115 aa24.42■■□□□ 1.5
CHKB-209ENST00000481673 SLC4A3P48751 1232 aa24.42■■□□□ 1.5
CHKB-209ENST00000481673 GCKRQ14397 625 aa24.42■■□□□ 1.5
CHKB-209ENST00000481673 VSIG10Q8N0Z9 540 aa24.42■■□□□ 1.5
CHKB-209ENST00000481673 USP35Q9P2H5 1018 aa24.42■■□□□ 1.5
CHKB-209ENST00000481673 DISP2A7MBM2 1401 aa24.41■■□□□ 1.5
CHKB-209ENST00000481673 COL15A1P39059 1388 aa24.4■■□□□ 1.5
CHKB-209ENST00000481673 THRAP3Q9Y2W1 955 aaKnown RBP24.4■■□□□ 1.5
CHKB-209ENST00000481673 EXOC5O00471 708 aa24.39■■□□□ 1.5
CHKB-209ENST00000481673 REC8O95072 547 aa24.39■■□□□ 1.5
CHKB-209ENST00000481673 MYD88Q99836 296 aa24.39■■□□□ 1.5
CHKB-209ENST00000481673 LAMB4A4D0S4 1761 aa24.39■■□□□ 1.49
CHKB-209ENST00000481673 BCL11AQ9H165 835 aa24.38■■□□□ 1.49
CHKB-209ENST00000481673 KCPQ6ZWJ8 1503 aa24.38■■□□□ 1.49
CHKB-209ENST00000481673 SNX21Q969T3 373 aa24.38■■□□□ 1.49
CHKB-209ENST00000481673 TBC1D2Q9BYX2 928 aa24.38■■□□□ 1.49
CHKB-209ENST00000481673 UBR2Q8IWV8 1755 aa24.37■■□□□ 1.49
CHKB-209ENST00000481673 PAPPAQ13219 1627 aa24.37■■□□□ 1.49
CHKB-209ENST00000481673 GLI3P10071 1580 aa24.37■■□□□ 1.49
CHKB-209ENST00000481673 SHANK3Q9BYB0 1731 aa24.37■■□□□ 1.49
CHKB-209ENST00000481673 OS9Q13438 667 aaPredicted RBP24.36■■□□□ 1.49
CHKB-209ENST00000481673 SUCLG2Q96I99 432 aa24.36■■□□□ 1.49
CHKB-209ENST00000481673 CLASRPQ8N2M8 674 aaKnown RBP24.36■■□□□ 1.49
CHKB-209ENST00000481673 NBPF26B4DH59 902 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms