RNA–Protein interactions for RNA: ENST00000481648.5

SRSF11-213, Transcript of serine and arginine rich splicing factor 11, human

TSL 3

Gene SRSF11, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF11-213	ENST00000481648	COL5A3	P25940	1745 aa	Predicted RBP	13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	PRAMEF22	A3QJZ6	481 aa		13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	EIF2S2	P20042	333 aa	Known RBP	13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	KRT24	Q2M2I5	525 aa		13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	RC3H1	Q5TC82	1133 aa	Known RBP	13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	DUSP27	Q5VZP5	1158 aa		13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	AKT1S1	Q96B36	256 aa		13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	YTHDC1	Q96MU7	727 aa	Known RBP	13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	RTCB	Q9Y3I0	505 aa	Known RBP	13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	USP16	Q9Y5T5	823 aa		13.64	□□□□□ -0.23
SRSF11-213	ENST00000481648	LAMB4	A4D0S4	1761 aa		13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	ELL2	O00472	640 aa	Predicted RBP	13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	MSH5	O43196	834 aa		13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	PHF14	O94880	888 aa		13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	HOXB7	P09629	217 aa		13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	CANX	P27824	592 aa	Known RBP	13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	R3HDM1	Q15032	1099 aa	Known RBP	13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	CHMP4A	Q9BY43	222 aa		13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.63	□□□□□ -0.23
SRSF11-213	ENST00000481648	PSD	A5PKW4	1024 aa	Predicted RBP	13.62	□□□□□ -0.23
SRSF11-213	ENST00000481648	SLFN5	Q08AF3	891 aa		13.62	□□□□□ -0.23
SRSF11-213	ENST00000481648	HDGFL1	Q5TGJ6	251 aa		13.62	□□□□□ -0.23
SRSF11-213	ENST00000481648	FLAD1	Q8NFF5	587 aa		13.62	□□□□□ -0.23
SRSF11-213	ENST00000481648	NECTIN2	Q92692	538 aa		13.62	□□□□□ -0.23
SRSF11-213	ENST00000481648	CDCA7L	Q96GN5	454 aa		13.62	□□□□□ -0.23
SRSF11-213	ENST00000481648	ZBTB1	Q9Y2K1	713 aa		13.62	□□□□□ -0.23
SRSF11-213	ENST00000481648	SOS1	Q07889	1333 aa	Predicted RBP	13.62	□□□□□ -0.23
SRSF11-213	ENST00000481648	RPS6KA4	O75676	772 aa		13.61	□□□□□ -0.23
SRSF11-213	ENST00000481648	A1BG	P04217	495 aa		13.61	□□□□□ -0.23
SRSF11-213	ENST00000481648	SSFA2	P28290	1259 aa		13.61	□□□□□ -0.23
SRSF11-213	ENST00000481648	EXOSC9	Q06265	439 aa	Known RBP	13.61	□□□□□ -0.23
SRSF11-213	ENST00000481648	TWISTNB	Q3B726	338 aa	Predicted RBP	13.61	□□□□□ -0.23
SRSF11-213	ENST00000481648	INTS5	Q6P9B9	1019 aa	Known RBP	13.61	□□□□□ -0.23
SRSF11-213	ENST00000481648	C8orf58	Q8NAV2	365 aa		13.61	□□□□□ -0.23
SRSF11-213	ENST00000481648	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.6	□□□□□ -0.23
SRSF11-213	ENST00000481648	ADRA2B	P18089	450 aa		13.6	□□□□□ -0.23
SRSF11-213	ENST00000481648	TRAPPC3L	Q5T215	181 aa		13.6	□□□□□ -0.23
SRSF11-213	ENST00000481648	ARX	Q96QS3	562 aa		13.6	□□□□□ -0.23
SRSF11-213	ENST00000481648	ERBB4	Q15303	1308 aa		13.6	□□□□□ -0.23
SRSF11-213	ENST00000481648	MYL6B	P14649	208 aa		13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	RFC4	P35249	363 aa		13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	IL6ST	P40189	918 aa	Predicted RBP	13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	PIP4K2A	P48426	406 aa	Predicted RBP	13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	CCDC30	Q5VVM6	783 aa		13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	TSPYL6	Q8N831	410 aa		13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	STK31	Q9BXU1	1019 aa		13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	MYH14	Q7Z406	1995 aa	Known RBP	13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	PNPLA7	Q6ZV29	1317 aa		13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	UBR3	Q6ZT12	1888 aa		13.59	□□□□□ -0.23
SRSF11-213	ENST00000481648	COL15A1	P39059	1388 aa		13.58	□□□□□ -0.23
SRSF11-213	ENST00000481648	TUBGCP6	Q96RT7	1819 aa		13.58	□□□□□ -0.24
SRSF11-213	ENST00000481648		A0A087WZG4	1122 aa		13.58	□□□□□ -0.24
SRSF11-213	ENST00000481648	QSER1	Q2KHR3	1735 aa		13.57	□□□□□ -0.24
SRSF11-213	ENST00000481648	SMIM5	Q71RC9	77 aa		13.57	□□□□□ -0.24
SRSF11-213	ENST00000481648	COL23A1	Q86Y22	540 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF11-213	ENST00000481648	CHPF2	Q9P2E5	772 aa		13.57	□□□□□ -0.24
SRSF11-213	ENST00000481648	DBF4	Q9UBU7	674 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF11-213	ENST00000481648	NBPF26	B4DH59	902 aa		13.56	□□□□□ -0.24
SRSF11-213	ENST00000481648	ZPR1	O75312	459 aa		13.56	□□□□□ -0.24
SRSF11-213	ENST00000481648	EIF5	P55010	431 aa	Known RBP	13.56	□□□□□ -0.24
SRSF11-213	ENST00000481648	NBPF10	Q6P3W6	841 aa	Known RBP	13.56	□□□□□ -0.24
SRSF11-213	ENST00000481648	AMIGO3	Q86WK7	504 aa		13.56	□□□□□ -0.24
SRSF11-213	ENST00000481648	NBPF15	Q8N660	670 aa		13.56	□□□□□ -0.24
SRSF11-213	ENST00000481648	ARHGEF1	Q92888	912 aa	Known RBP	13.56	□□□□□ -0.24
SRSF11-213	ENST00000481648	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SRSF11-213	ENST00000481648	VAMP4	O75379	141 aa		13.55	□□□□□ -0.24
SRSF11-213	ENST00000481648	ANXA1	P04083	346 aa		13.55	□□□□□ -0.24
SRSF11-213	ENST00000481648	KIF6	Q6ZMV9	814 aa		13.55	□□□□□ -0.24
SRSF11-213	ENST00000481648	DZIP3	Q86Y13	1208 aa	Known RBP	13.55	□□□□□ -0.24
SRSF11-213	ENST00000481648	TRMT2A	Q8IZ69	625 aa	Known RBP	13.55	□□□□□ -0.24
SRSF11-213	ENST00000481648	HYPK	Q9NX55	129 aa		13.55	□□□□□ -0.24
SRSF11-213	ENST00000481648	TCERG1	O14776	1098 aa	Known RBP	13.54	□□□□□ -0.24
SRSF11-213	ENST00000481648	CT47B1	P0C2W7	299 aa	Predicted RBP	13.54	□□□□□ -0.24
SRSF11-213	ENST00000481648	PROSER3	Q2NL68	480 aa		13.54	□□□□□ -0.24
SRSF11-213	ENST00000481648	SLC16A10	Q8TF71	515 aa		13.54	□□□□□ -0.24
SRSF11-213	ENST00000481648	TBC1D2B	Q9UPU7	963 aa		13.54	□□□□□ -0.24
SRSF11-213	ENST00000481648	C4A	P0C0L4	1744 aa		13.53	□□□□□ -0.24
SRSF11-213	ENST00000481648	ZBTB7A	O95365	584 aa		13.53	□□□□□ -0.24
SRSF11-213	ENST00000481648	AIMP1	Q12904	312 aa	Known RBP	13.53	□□□□□ -0.24
SRSF11-213	ENST00000481648	PDIA6	Q15084	440 aa		13.53	□□□□□ -0.24
SRSF11-213	ENST00000481648	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF11-213	ENST00000481648	SRP68	Q9UHB9	627 aa	Known RBP	13.53	□□□□□ -0.24
SRSF11-213	ENST00000481648	NARF	Q9UHQ1	456 aa		13.53	□□□□□ -0.24
SRSF11-213	ENST00000481648	USP42	Q9H9J4	1324 aa	Known RBP	13.53	□□□□□ -0.24
SRSF11-213	ENST00000481648	SLC4A2	P04920	1241 aa		13.52	□□□□□ -0.25
SRSF11-213	ENST00000481648	USPL1	Q5W0Q7	1092 aa		13.52	□□□□□ -0.25
SRSF11-213	ENST00000481648	MSL1	Q68DK7	614 aa		13.52	□□□□□ -0.25
SRSF11-213	ENST00000481648	XAGE3	Q8WTP9	111 aa		13.52	□□□□□ -0.25
SRSF11-213	ENST00000481648	ZNF428	Q96B54	188 aa		13.52	□□□□□ -0.25
SRSF11-213	ENST00000481648	MTFR1L	Q9H019	292 aa		13.52	□□□□□ -0.25
SRSF11-213	ENST00000481648	ZNF652	Q9Y2D9	606 aa		13.52	□□□□□ -0.25
SRSF11-213	ENST00000481648	CASZ1	Q86V15	1759 aa		13.52	□□□□□ -0.25
SRSF11-213	ENST00000481648	DDX58	O95786	925 aa	Known RBP	13.51	□□□□□ -0.25
SRSF11-213	ENST00000481648	COPS6	Q7L5N1	327 aa		13.51	□□□□□ -0.25
SRSF11-213	ENST00000481648	ZBTB3	Q9H5J0	574 aa		13.51	□□□□□ -0.25
SRSF11-213	ENST00000481648	MAP3K15	Q6ZN16	1313 aa		13.5	□□□□□ -0.25
SRSF11-213	ENST00000481648	POLD1	P28340	1107 aa		13.5	□□□□□ -0.25
SRSF11-213	ENST00000481648	TTLL7	Q6ZT98	887 aa		13.5	□□□□□ -0.25
SRSF11-213	ENST00000481648	NLGN1	Q8N2Q7	840 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms