RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 PCNTO95613 3336 aa12.74□□□□□ -0.37
GTF3C2-210ENST00000480989 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 HMOX1P09601 288 aa12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 COL11A2P13942 1736 aaPredicted RBP12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
GTF3C2-210ENST00000480989 HTRA3P83110 453 aa12.72□□□□□ -0.37
GTF3C2-210ENST00000480989 MTHFSDQ2M296 383 aaKnown RBP12.72□□□□□ -0.37
GTF3C2-210ENST00000480989 SCN7AQ01118 1682 aa12.72□□□□□ -0.37
GTF3C2-210ENST00000480989 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.37
GTF3C2-210ENST00000480989 COL15A1P39059 1388 aa12.71□□□□□ -0.37
GTF3C2-210ENST00000480989 TOMM70O94826 608 aa12.71□□□□□ -0.37
GTF3C2-210ENST00000480989 RASSF7Q02833 373 aa12.71□□□□□ -0.37
GTF3C2-210ENST00000480989 NFIXQ14938 502 aa12.71□□□□□ -0.37
GTF3C2-210ENST00000480989 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
GTF3C2-210ENST00000480989 KNSTRNQ9Y448 316 aa12.7□□□□□ -0.38
GTF3C2-210ENST00000480989 DALRD3Q5D0E6 543 aaKnown RBP12.69□□□□□ -0.38
GTF3C2-210ENST00000480989 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
GTF3C2-210ENST00000480989 APLP1P51693 650 aa12.68□□□□□ -0.38
GTF3C2-210ENST00000480989 RNF181Q9P0P0 153 aa12.68□□□□□ -0.38
GTF3C2-210ENST00000480989 BCORQ6W2J9 1755 aa12.68□□□□□ -0.38
GTF3C2-210ENST00000480989 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
GTF3C2-210ENST00000480989 FER1L6Q2WGJ9 1857 aa12.67□□□□□ -0.38
GTF3C2-210ENST00000480989 CACNA1SQ13698 1873 aa12.66□□□□□ -0.38
GTF3C2-210ENST00000480989 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
GTF3C2-210ENST00000480989 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
GTF3C2-210ENST00000480989 DICER1Q9UPY3 1922 aaKnown RBP12.65□□□□□ -0.38
GTF3C2-210ENST00000480989 NFKBIEO00221 500 aa12.65□□□□□ -0.38
GTF3C2-210ENST00000480989 ZPR1O75312 459 aa12.65□□□□□ -0.38
GTF3C2-210ENST00000480989 SERPINB2P05120 415 aa12.65□□□□□ -0.38
GTF3C2-210ENST00000480989 EIF5P55010 431 aaKnown RBP12.65□□□□□ -0.38
GTF3C2-210ENST00000480989 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
GTF3C2-210ENST00000480989 RRAGCQ9HB90 399 aa12.65□□□□□ -0.38
GTF3C2-210ENST00000480989 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
GTF3C2-210ENST00000480989 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
GTF3C2-210ENST00000480989 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
GTF3C2-210ENST00000480989 SLX4Q8IY92 1834 aa12.64□□□□□ -0.39
GTF3C2-210ENST00000480989 ARFGEF2Q9Y6D5 1785 aa12.64□□□□□ -0.39
GTF3C2-210ENST00000480989 POTECB2RU33 542 aa12.63□□□□□ -0.39
GTF3C2-210ENST00000480989 KCNQ3O43525 872 aa12.63□□□□□ -0.39
GTF3C2-210ENST00000480989 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
GTF3C2-210ENST00000480989 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
GTF3C2-210ENST00000480989 CCER1Q8TC90 406 aaPredicted RBP12.63□□□□□ -0.39
GTF3C2-210ENST00000480989 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
GTF3C2-210ENST00000480989 HEG1Q9ULI3 1381 aa12.63□□□□□ -0.39
GTF3C2-210ENST00000480989 NPC1L1Q9UHC9 1359 aa12.62□□□□□ -0.39
GTF3C2-210ENST00000480989 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
GTF3C2-210ENST00000480989 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
GTF3C2-210ENST00000480989 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
GTF3C2-210ENST00000480989 FSTL1Q12841 308 aa12.61□□□□□ -0.39
GTF3C2-210ENST00000480989 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
GTF3C2-210ENST00000480989 C2CD5Q86YS7 1000 aa12.61□□□□□ -0.39
GTF3C2-210ENST00000480989 PHACTR3Q96KR7 559 aa12.61□□□□□ -0.39
GTF3C2-210ENST00000480989 KDM2BQ8NHM5 1336 aa12.61□□□□□ -0.39
GTF3C2-210ENST00000480989 PRAMEF22A3QJZ6 481 aa12.6□□□□□ -0.39
GTF3C2-210ENST00000480989 PRR5LQ6MZQ0 368 aa12.6□□□□□ -0.39
GTF3C2-210ENST00000480989 TTLL6Q8N841 843 aa12.6□□□□□ -0.39
GTF3C2-210ENST00000480989 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
GTF3C2-210ENST00000480989 GLTPD2A6NH11 291 aa12.59□□□□□ -0.39
GTF3C2-210ENST00000480989 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
GTF3C2-210ENST00000480989 A1BGP04217 495 aa12.59□□□□□ -0.39
GTF3C2-210ENST00000480989 LMNB1P20700 586 aa12.59□□□□□ -0.39
GTF3C2-210ENST00000480989 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
GTF3C2-210ENST00000480989 CNGB1Q14028 1251 aaPredicted RBP12.59□□□□□ -0.39
GTF3C2-210ENST00000480989 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
GTF3C2-210ENST00000480989 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
GTF3C2-210ENST00000480989 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
GTF3C2-210ENST00000480989 U2SURPO15042 1029 aaKnown RBP12.58□□□□□ -0.4
GTF3C2-210ENST00000480989 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
GTF3C2-210ENST00000480989 C16orf71Q8IYS4 520 aaPredicted RBP12.58□□□□□ -0.4
GTF3C2-210ENST00000480989 TTC5Q8N0Z6 440 aa12.57□□□□□ -0.4
GTF3C2-210ENST00000480989 H0YIN7 160 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 C21orf2O43822 256 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 STARD3NLO95772 234 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 POTEIP0CG38 1075 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 IL6STP40189 918 aaPredicted RBP12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 SMC1BQ8NDV3 1235 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 BRIP1Q9BX63 1249 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
GTF3C2-210ENST00000480989 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
GTF3C2-210ENST00000480989 TEFQ10587 303 aa12.55□□□□□ -0.4
GTF3C2-210ENST00000480989 ZNF622Q969S3 477 aaKnown RBP eCLIP12.55□□□□□ -0.4
GTF3C2-210ENST00000480989 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
GTF3C2-210ENST00000480989 A0A087WZG4 1122 aa12.54□□□□□ -0.4
GTF3C2-210ENST00000480989 NBPF26B4DH59 902 aa12.54□□□□□ -0.4
GTF3C2-210ENST00000480989 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-210ENST00000480989 NBPF10Q6P3W6 841 aaKnown RBP12.54□□□□□ -0.4
GTF3C2-210ENST00000480989 NBPF15Q8N660 670 aa12.54□□□□□ -0.4
GTF3C2-210ENST00000480989 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms