RNA–Protein interactions for RNA: ENST00000480594.1

SLC1A4-203, Transcript of solute carrier family 1 member 4, humanhuman

TSL 2

Gene SLC1A4, Length 5,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-203ENST00000480594 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLC1A4-203ENST00000480594 CEP135Q66GS9 1140 aa12.64□□□□□ -0.39
SLC1A4-203ENST00000480594 SNX21Q969T3 373 aa12.64□□□□□ -0.39
SLC1A4-203ENST00000480594 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
SLC1A4-203ENST00000480594 GBP2P32456 591 aaPredicted RBP12.64□□□□□ -0.39
SLC1A4-203ENST00000480594 ZNF165P49910 485 aa12.64□□□□□ -0.39
SLC1A4-203ENST00000480594 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
SLC1A4-203ENST00000480594 BOLA2Q9H3K6 86 aa12.64□□□□□ -0.39
SLC1A4-203ENST00000480594 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 IDH1O75874 414 aaKnown RBP12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 YEATS4O95619 227 aa12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 ANKRD62A6NC57 917 aa12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 POLR3GO15318 223 aaPredicted RBP12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 SSBP05455 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 TMEM132AQ24JP5 1023 aa12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 SEPT11Q9NVA2 429 aaKnown RBP12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 TMC6Q7Z403 805 aa12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 CNNM3Q8NE01 707 aa12.63□□□□□ -0.39
SLC1A4-203ENST00000480594 FGFR1OPO95684 399 aaKnown RBP12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 PAFAH1B1P43034 410 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 HS1BP3Q53T59 392 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 ARHGAP45Q92619 1136 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 GDPD2Q9HCC8 539 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 RAI14Q9P0K7 980 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 LRP2BPQ9P2M1 347 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 THEMISQ8N1K5 641 aaPredicted RBP12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 PPP1R12BO60237 982 aaPredicted RBP12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 WWC2Q6AWC2 1192 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 TSG101Q99816 390 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 MIS18AQ9NYP9 233 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 HMG20BQ9P0W2 317 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 MRC2Q9UBG0 1479 aa12.62□□□□□ -0.39
SLC1A4-203ENST00000480594 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 IFIT1P09914 478 aaKnown RBP12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 ZSCAN22P10073 491 aaPredicted RBP12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 KLHL10Q6JEL2 608 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 DNAAF4Q8WXU2 420 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 ECHDC1Q9NTX5 307 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 ATP2B2Q01814 1243 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 KRT222Q8N1A0 295 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 ZSCAN16Q9H4T2 348 aaPredicted RBP12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 DNMBPQ6XZF7 1577 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 GTF2F1P35269 517 aaKnown RBP eCLIP12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■■■■■ 34
SLC1A4-203ENST00000480594 VPS36Q86VN1 386 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
SLC1A4-203ENST00000480594 MAP2K1Q02750 393 aaPredicted RBP12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 TMX3Q96JJ7 454 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 RALGAPBQ86X10 1494 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 KCNH5Q8NCM2 988 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 ZKSCAN5Q9Y2L8 839 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 TUBB4AP04350 444 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 ANAPC15P60006 121 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 KIAA0586Q9BVV6 1533 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 C8orf34Q49A92 452 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 MAGI1Q96QZ7 1491 aaPredicted RBP12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 CETN2P41208 172 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 PROSER2Q86WR7 435 aaPredicted RBP12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 DYDC1Q8WWB3 177 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 NAA15Q9BXJ9 866 aaKnown RBP12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
SLC1A4-203ENST00000480594 F6X3S4 739 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 IGHMBP2P38935 993 aaKnown RBP12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 KANK3Q6NY19 840 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 PYM1Q9BRP8 204 aaKnown RBP12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 ZNF213O14771 459 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 TFIP11Q9UBB9 837 aaKnown RBP12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 SLC12A7Q9Y666 1083 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 IQGAP2Q13576 1575 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 GUCY1B3Q02153 619 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 GOLGA8BA8MQT2 603 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 NAPBQ9H115 298 aa12.59□□□□□ -0.39
SLC1A4-203ENST00000480594 FLIIQ13045 1269 aa12.58□□□□□ -0.39
SLC1A4-203ENST00000480594 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.39
SLC1A4-203ENST00000480594 TIGD1Q96MW7 591 aa12.58□□□□□ -0.39
SLC1A4-203ENST00000480594 ZMYND15Q9H091 742 aa12.58□□□□□ -0.39
SLC1A4-203ENST00000480594 CUL7Q14999 1698 aa12.58□□□□□ -0.39
SLC1A4-203ENST00000480594 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 IFFO1Q0D2I5 559 aa12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 CCDC91Q7Z6B0 441 aa12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 CCDC8Q9H0W5 538 aaPredicted RBP12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 HYPKQ9NX55 129 aa12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 GCOM1H8Y6P7 765 aaPredicted RBP12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 MYZAPP0CAP1 466 aa12.58□□□□□ -0.4
SLC1A4-203ENST00000480594 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms