RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 NMRK2Q9NPI5 230 aa14.27□□□□□ -0.13
SMURF1-204ENST00000480055 ATG3Q9NT62 314 aa14.27□□□□□ -0.13
SMURF1-204ENST00000480055 BCS1LQ9Y276 419 aa14.27□□□□□ -0.13
SMURF1-204ENST00000480055 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.13
SMURF1-204ENST00000480055 A0A0G2JLW4 131 aa14.26□□□□□ -0.13
SMURF1-204ENST00000480055 NLGN1Q8N2Q7 840 aa14.26□□□□□ -0.13
SMURF1-204ENST00000480055 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
SMURF1-204ENST00000480055 EYA1Q99502 592 aa14.26□□□□□ -0.13
SMURF1-204ENST00000480055 CNTNAP4Q9C0A0 1308 aa14.25□□□□□ -0.13
SMURF1-204ENST00000480055 CHRM1P11229 460 aaPredicted RBP14.25□□□□□ -0.13
SMURF1-204ENST00000480055 TNNT2P45379 298 aaPredicted RBP14.25□□□□□ -0.13
SMURF1-204ENST00000480055 RBM46Q8TBY0 533 aaKnown RBP14.25□□□□□ -0.13
SMURF1-204ENST00000480055 PHF12Q96QT6 1004 aa14.25□□□□□ -0.13
SMURF1-204ENST00000480055 CCDC87Q9NVE4 849 aa14.25□□□□□ -0.13
SMURF1-204ENST00000480055 RTCBQ9Y3I0 505 aaKnown RBP14.25□□□□□ -0.13
SMURF1-204ENST00000480055 KCPQ6ZWJ8 1503 aa14.25□□□□□ -0.13
SMURF1-204ENST00000480055 NRXN2Q9P2S2 1712 aa14.24□□□□□ -0.13
SMURF1-204ENST00000480055 DPEP1P16444 411 aa14.24□□□□□ -0.13
SMURF1-204ENST00000480055 TRAPPC3LQ5T215 181 aa14.24□□□□□ -0.13
SMURF1-204ENST00000480055 ARHGAP27Q6ZUM4 889 aa14.24□□□□□ -0.13
SMURF1-204ENST00000480055 SLC4A9Q96Q91 983 aa14.24□□□□□ -0.13
SMURF1-204ENST00000480055 KDM6AO15550 1401 aaPredicted RBP14.24□□□□□ -0.13
SMURF1-204ENST00000480055 FCHSD2O94868 740 aa14.23□□□□□ -0.13
SMURF1-204ENST00000480055 GYS1P13807 737 aa14.23□□□□□ -0.13
SMURF1-204ENST00000480055 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
SMURF1-204ENST00000480055 ARHGEF1Q92888 912 aaKnown RBP14.23□□□□□ -0.13
SMURF1-204ENST00000480055 DICER1Q9UPY3 1922 aaKnown RBP14.22□□□□□ -0.13
SMURF1-204ENST00000480055 ERVV-2B6SEH9 535 aa14.21□□□□□ -0.13
SMURF1-204ENST00000480055 RPS6KA4O75676 772 aa14.21□□□□□ -0.13
SMURF1-204ENST00000480055 KCNA3P22001 575 aa14.21□□□□□ -0.13
SMURF1-204ENST00000480055 C9orf131Q5VYM1 1079 aa14.21□□□□□ -0.13
SMURF1-204ENST00000480055 JMYQ8N9B5 988 aa14.21□□□□□ -0.13
SMURF1-204ENST00000480055 KLRG1Q96E93 195 aa14.21□□□□□ -0.13
SMURF1-204ENST00000480055 POLKQ9UBT6 870 aa14.21□□□□□ -0.13
SMURF1-204ENST00000480055 PARP3Q9Y6F1 533 aa14.21□□□□□ -0.13
SMURF1-204ENST00000480055 RFC4P35249 363 aa14.2□□□□□ -0.14
SMURF1-204ENST00000480055 FSTL1Q12841 308 aa14.2□□□□□ -0.14
SMURF1-204ENST00000480055 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
SMURF1-204ENST00000480055 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
SMURF1-204ENST00000480055 KIF12Q96FN5 646 aa14.2□□□□□ -0.14
SMURF1-204ENST00000480055 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
SMURF1-204ENST00000480055 C16orf71Q8IYS4 520 aaPredicted RBP14.19□□□□□ -0.14
SMURF1-204ENST00000480055 KDM2BQ8NHM5 1336 aa14.18□□□□□ -0.14
SMURF1-204ENST00000480055 MAP3K13O43283 966 aa14.18□□□□□ -0.14
SMURF1-204ENST00000480055 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
SMURF1-204ENST00000480055 HTRA3P83110 453 aa14.18□□□□□ -0.14
SMURF1-204ENST00000480055 PIM2Q9P1W9 311 aa14.18□□□□□ -0.14
SMURF1-204ENST00000480055 PCDHB13Q9Y5F0 798 aa14.18□□□□□ -0.14
SMURF1-204ENST00000480055 USP42Q9H9J4 1324 aaKnown RBP14.17□□□□□ -0.14
SMURF1-204ENST00000480055 CABP4P57796 275 aa14.17□□□□□ -0.14
SMURF1-204ENST00000480055 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
SMURF1-204ENST00000480055 COL13A1Q5TAT6 717 aaPredicted RBP14.17□□□□□ -0.14
SMURF1-204ENST00000480055 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
SMURF1-204ENST00000480055 PCNTO95613 3336 aa14.17□□□□□ -0.14
SMURF1-204ENST00000480055 CACNA1SQ13698 1873 aa14.16□□□□□ -0.14
SMURF1-204ENST00000480055 ANKRD31Q8N7Z5 1873 aa14.16□□□□□ -0.14
SMURF1-204ENST00000480055 CLCN6P51797 869 aa14.16□□□□□ -0.14
SMURF1-204ENST00000480055 DDR1Q08345 913 aa14.16□□□□□ -0.14
SMURF1-204ENST00000480055 DALRD3Q5D0E6 543 aaKnown RBP14.16□□□□□ -0.14
SMURF1-204ENST00000480055 RNF181Q9P0P0 153 aa14.16□□□□□ -0.14
SMURF1-204ENST00000480055 FER1L6Q2WGJ9 1857 aa14.16□□□□□ -0.14
SMURF1-204ENST00000480055 CRKLP46109 303 aaKnown RBP14.15□□□□□ -0.14
SMURF1-204ENST00000480055 ZNF530Q6P9A1 599 aaPredicted RBP14.15□□□□□ -0.14
SMURF1-204ENST00000480055 ZNF467Q7Z7K2 595 aaPredicted RBP14.15□□□□□ -0.14
SMURF1-204ENST00000480055 SRP68Q9UHB9 627 aaKnown RBP14.15□□□□□ -0.14
SMURF1-204ENST00000480055 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
SMURF1-204ENST00000480055 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.15
SMURF1-204ENST00000480055 RGL2O15211 777 aa14.14□□□□□ -0.15
SMURF1-204ENST00000480055 C1orf141Q5JVX7 400 aa14.14□□□□□ -0.15
SMURF1-204ENST00000480055 COL11A2P13942 1736 aaPredicted RBP14.14□□□□□ -0.15
SMURF1-204ENST00000480055 ARFGEF2Q9Y6D5 1785 aa14.14□□□□□ -0.15
SMURF1-204ENST00000480055 MRC1P22897 1456 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 PTCD1O75127 700 aaKnown RBP14.13□□□□□ -0.15
SMURF1-204ENST00000480055 CHRNA5P30532 468 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 MTHFSP49914 203 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 AMOTQ4VCS5 1084 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 SMC1BQ8NDV3 1235 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 PANK3Q9H999 370 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 RRAGCQ9HB90 399 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 SCN7AQ01118 1682 aa14.13□□□□□ -0.15
SMURF1-204ENST00000480055 POLRMTO00411 1230 aaKnown RBP14.12□□□□□ -0.15
SMURF1-204ENST00000480055 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
SMURF1-204ENST00000480055 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
SMURF1-204ENST00000480055 RIOK3O14730 519 aaKnown RBP14.11□□□□□ -0.15
SMURF1-204ENST00000480055 TM4SF1P30408 202 aa14.1□□□□□ -0.15
SMURF1-204ENST00000480055 EIF4G2P78344 907 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMURF1-204ENST00000480055 RASSF7Q02833 373 aa14.1□□□□□ -0.15
SMURF1-204ENST00000480055 INTS5Q6P9B9 1019 aaKnown RBP14.1□□□□□ -0.15
SMURF1-204ENST00000480055 TNS4Q8IZW8 715 aa14.1□□□□□ -0.15
SMURF1-204ENST00000480055 NFATC2IPQ8NCF5 419 aa14.1□□□□□ -0.15
SMURF1-204ENST00000480055 PCDHB8Q9UN66 801 aa14.1□□□□□ -0.15
SMURF1-204ENST00000480055 SIPA1L3O60292 1781 aaPredicted RBP14.09□□□□□ -0.15
SMURF1-204ENST00000480055 PRELPP51888 382 aa14.09□□□□□ -0.15
SMURF1-204ENST00000480055 AEBP1Q8IUX7 1158 aa14.09□□□□□ -0.15
SMURF1-204ENST00000480055 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
SMURF1-204ENST00000480055 SOS1Q07889 1333 aaPredicted RBP14.09□□□□□ -0.15
SMURF1-204ENST00000480055 SULT6B1Q6IMI4 303 aa14.08□□□□□ -0.16
SMURF1-204ENST00000480055 IFNL1Q8IU54 200 aa14.08□□□□□ -0.16
SMURF1-204ENST00000480055 MS4A3Q96HJ5 214 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms