RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 GLTPD2A6NH11 291 aa22.03■■□□□ 1.12
DDX56-210ENST00000479440 VEGFAP15692 232 aaPredicted RBP22.03■■□□□ 1.12
DDX56-210ENST00000479440 SULT6B1Q6IMI4 303 aa22.03■■□□□ 1.12
DDX56-210ENST00000479440 PRELPP51888 382 aa22.02■■□□□ 1.12
DDX56-210ENST00000479440 AKAP4Q5JQC9 854 aa22.02■■□□□ 1.12
DDX56-210ENST00000479440 DNAJC10Q8IXB1 793 aa22.02■■□□□ 1.12
DDX56-210ENST00000479440 HSPA1AP0DMV8 641 aaKnown RBP22.01■■□□□ 1.11
DDX56-210ENST00000479440 HSPA1BP0DMV9 641 aaKnown RBP22.01■■□□□ 1.11
DDX56-210ENST00000479440 AFDNP55196 1824 aaKnown RBP22.01■■□□□ 1.11
DDX56-210ENST00000479440 NFIXQ14938 502 aa22■■□□□ 1.11
DDX56-210ENST00000479440 MORC1Q86VD1 984 aa22■■□□□ 1.11
DDX56-210ENST00000479440 TTLL6Q8N841 843 aa22■■□□□ 1.11
DDX56-210ENST00000479440 SLC52A2Q9HAB3 445 aa22■■□□□ 1.11
DDX56-210ENST00000479440 NARFQ9UHQ1 456 aa22■■□□□ 1.11
DDX56-210ENST00000479440 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
DDX56-210ENST00000479440 CYP19A1P11511 503 aaPredicted RBP21.98■■□□□ 1.11
DDX56-210ENST00000479440 SERPINB2P05120 415 aa21.97■■□□□ 1.11
DDX56-210ENST00000479440 C2CD5Q86YS7 1000 aa21.97■■□□□ 1.11
DDX56-210ENST00000479440 PANK3Q9H999 370 aa21.97■■□□□ 1.11
DDX56-210ENST00000479440 ZBTB1Q9Y2K1 713 aa21.97■■□□□ 1.11
DDX56-210ENST00000479440 H0YIN7 160 aa21.95■■□□□ 1.1
DDX56-210ENST00000479440 CARMIL3Q8ND23 1372 aa21.95■■□□□ 1.1
DDX56-210ENST00000479440 NFKBIEO00221 500 aa21.94■■□□□ 1.1
DDX56-210ENST00000479440 IL13P35225 146 aa21.94■■□□□ 1.1
DDX56-210ENST00000479440 DPY19L2Q6NUT2 758 aa21.94■■□□□ 1.1
DDX56-210ENST00000479440 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
DDX56-210ENST00000479440 SLC39A6Q13433 755 aa21.93■■□□□ 1.1
DDX56-210ENST00000479440 SCN7AQ01118 1682 aa21.92■■□□□ 1.1
DDX56-210ENST00000479440 RNMTO43148 476 aaKnown RBP21.92■■□□□ 1.1
DDX56-210ENST00000479440 BCL2L12Q9HB09 334 aa21.92■■□□□ 1.1
DDX56-210ENST00000479440 PDZRN3Q9UPQ7 1066 aa21.92■■□□□ 1.1
DDX56-210ENST00000479440 LGR6Q9HBX8 967 aa21.91■■□□□ 1.1
DDX56-210ENST00000479440 UBR2Q8IWV8 1755 aa21.91■■□□□ 1.1
DDX56-210ENST00000479440 A0A087WZG4 1122 aa21.9■■□□□ 1.1
DDX56-210ENST00000479440 EIF4G2P78344 907 aaKnown RBP eCLIP21.9■■□□□ 1.1
DDX56-210ENST00000479440 VIRMAQ69YN4 1812 aaKnown RBP21.89■■□□□ 1.09
DDX56-210ENST00000479440 STARD3NLO95772 234 aa21.88■■□□□ 1.09
DDX56-210ENST00000479440 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
DDX56-210ENST00000479440 PDE6BP35913 854 aa21.88■■□□□ 1.09
DDX56-210ENST00000479440 ERFEQ4G0M1 354 aa21.88■■□□□ 1.09
DDX56-210ENST00000479440 BICDL1Q6ZP65 573 aa21.88■■□□□ 1.09
DDX56-210ENST00000479440 TTC5Q8N0Z6 440 aa21.88■■□□□ 1.09
DDX56-210ENST00000479440 ZNF622Q969S3 477 aaKnown RBP eCLIP21.88■■□□□ 1.09
DDX56-210ENST00000479440 CREBZFQ9NS37 354 aa21.88■■□□□ 1.09
DDX56-210ENST00000479440 KNSTRNQ9Y448 316 aa21.88■■□□□ 1.09
DDX56-210ENST00000479440 COL11A2P13942 1736 aaPredicted RBP21.88■■□□□ 1.09
DDX56-210ENST00000479440 CCDC88AQ3V6T2 1871 aa21.88■■□□□ 1.09
DDX56-210ENST00000479440 POTECB2RU33 542 aa21.87■■□□□ 1.09
DDX56-210ENST00000479440 LTBP3Q9NS15 1303 aa21.86■■□□□ 1.09
DDX56-210ENST00000479440 CHADLQ6NUI6 762 aa21.86■■□□□ 1.09
DDX56-210ENST00000479440 BRIP1Q9BX63 1249 aa21.86■■□□□ 1.09
DDX56-210ENST00000479440 ANKRD31Q8N7Z5 1873 aa21.86■■□□□ 1.09
DDX56-210ENST00000479440 DICER1Q9UPY3 1922 aaKnown RBP21.85■■□□□ 1.09
DDX56-210ENST00000479440 C21orf2O43822 256 aa21.85■■□□□ 1.09
DDX56-210ENST00000479440 HSPA5P11021 654 aaKnown RBP21.85■■□□□ 1.09
DDX56-210ENST00000479440 EIF5P55010 431 aaKnown RBP21.85■■□□□ 1.09
DDX56-210ENST00000479440 TAOK3Q9H2K8 898 aa21.85■■□□□ 1.09
DDX56-210ENST00000479440 FER1L6Q2WGJ9 1857 aa21.85■■□□□ 1.09
DDX56-210ENST00000479440 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
DDX56-210ENST00000479440 HMOX1P09601 288 aa21.84■■□□□ 1.09
DDX56-210ENST00000479440 TBC1D9BQ66K14 1250 aa21.84■■□□□ 1.09
DDX56-210ENST00000479440 PCNTO95613 3336 aa21.84■■□□□ 1.09
DDX56-210ENST00000479440 ZNF219Q9P2Y4 722 aaPredicted RBP21.83■■□□□ 1.09
DDX56-210ENST00000479440 NPHP1O15259 732 aa21.82■■□□□ 1.08
DDX56-210ENST00000479440 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
DDX56-210ENST00000479440 SOGA3Q5TF21 947 aa21.82■■□□□ 1.08
DDX56-210ENST00000479440 PRR5LQ6MZQ0 368 aa21.82■■□□□ 1.08
DDX56-210ENST00000479440 MKRN1Q9UHC7 482 aaKnown RBP21.82■■□□□ 1.08
DDX56-210ENST00000479440 TRIM26Q12899 539 aaPredicted RBP21.81■■□□□ 1.08
DDX56-210ENST00000479440 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
DDX56-210ENST00000479440 CNKSR1Q969H4 720 aa21.81■■□□□ 1.08
DDX56-210ENST00000479440 TEX13AQ9BXU3 409 aaPredicted RBP21.81■■□□□ 1.08
DDX56-210ENST00000479440 ZNF330Q9Y3S2 320 aaPredicted RBP21.81■■□□□ 1.08
DDX56-210ENST00000479440 ARFGEF2Q9Y6D5 1785 aa21.8■■□□□ 1.08
DDX56-210ENST00000479440 CNTNAP1P78357 1384 aa21.8■■□□□ 1.08
DDX56-210ENST00000479440 HEG1Q9ULI3 1381 aa21.8■■□□□ 1.08
DDX56-210ENST00000479440 IQCA1LA6NCM1 817 aa21.8■■□□□ 1.08
DDX56-210ENST00000479440 ST5P78524 1137 aa21.8■■□□□ 1.08
DDX56-210ENST00000479440 CNBD1Q8NA66 436 aa21.8■■□□□ 1.08
DDX56-210ENST00000479440 STYK1Q6J9G0 422 aa21.79■■□□□ 1.08
DDX56-210ENST00000479440 DDNO94850 711 aaPredicted RBP21.78■■□□□ 1.08
DDX56-210ENST00000479440 IL6STP40189 918 aaPredicted RBP21.78■■□□□ 1.08
DDX56-210ENST00000479440 TEFQ10587 303 aa21.78■■□□□ 1.08
DDX56-210ENST00000479440 AMER1Q5JTC6 1135 aaPredicted RBP21.78■■□□□ 1.08
DDX56-210ENST00000479440 BCORQ6W2J9 1755 aa21.77■■□□□ 1.08
DDX56-210ENST00000479440 DIAPH1O60610 1272 aaKnown RBP21.77■■□□□ 1.08
DDX56-210ENST00000479440 PRPF40BQ6NWY9 871 aaKnown RBP21.77■■□□□ 1.08
DDX56-210ENST00000479440 LDHDQ86WU2 507 aa21.77■■□□□ 1.08
DDX56-210ENST00000479440 SETDB2Q96T68 719 aa21.77■■□□□ 1.08
DDX56-210ENST00000479440 POTEIP0CG38 1075 aa21.76■■□□□ 1.07
DDX56-210ENST00000479440 POTEJP0CG39 1038 aa21.76■■□□□ 1.07
DDX56-210ENST00000479440 ZNF790Q6PG37 636 aa21.76■■□□□ 1.07
DDX56-210ENST00000479440 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
DDX56-210ENST00000479440 AIDAQ96BJ3 306 aa21.76■■□□□ 1.07
DDX56-210ENST00000479440 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
DDX56-210ENST00000479440 ZNF496Q96IT1 587 aaPredicted RBP21.76■■□□□ 1.07
DDX56-210ENST00000479440 TBC1D2BQ9UPU7 963 aa21.76■■□□□ 1.07
DDX56-210ENST00000479440 CACNA1SQ13698 1873 aa21.75■■□□□ 1.07
DDX56-210ENST00000479440 FOXN1O15353 648 aa21.75■■□□□ 1.07
DDX56-210ENST00000479440 PRDM10Q9NQV6 1147 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms