RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 ZBTB1Q9Y2K1 713 aa22.25■■□□□ 1.15
PHF1-207ENST00000479029 ZNF496Q96IT1 587 aaPredicted RBP22.24■■□□□ 1.15
PHF1-207ENST00000479029 TEX13AQ9BXU3 409 aaPredicted RBP22.24■■□□□ 1.15
PHF1-207ENST00000479029 KIF13BQ9NQT8 1826 aa22.23■■□□□ 1.15
PHF1-207ENST00000479029 POLRMTO00411 1230 aaKnown RBP22.23■■□□□ 1.15
PHF1-207ENST00000479029 FCHSD2O94868 740 aa22.23■■□□□ 1.15
PHF1-207ENST00000479029 CANXP27824 592 aaKnown RBP22.23■■□□□ 1.15
PHF1-207ENST00000479029 COL15A1P39059 1388 aa22.23■■□□□ 1.15
PHF1-207ENST00000479029 SENP3-EIF4A1A0A087X0R7 540 aa22.22■■□□□ 1.15
PHF1-207ENST00000479029 PIM2Q9P1W9 311 aa22.22■■□□□ 1.15
PHF1-207ENST00000479029 ADCY9O60503 1353 aa22.22■■□□□ 1.15
PHF1-207ENST00000479029 KCNA3P22001 575 aa22.21■■□□□ 1.15
PHF1-207ENST00000479029 ARHGAP27Q6ZUM4 889 aa22.21■■□□□ 1.15
PHF1-207ENST00000479029 ZNF526Q8TF50 670 aaPredicted RBP22.21■■□□□ 1.15
PHF1-207ENST00000479029 FMNL2Q96PY5 1086 aa22.21■■□□□ 1.15
PHF1-207ENST00000479029 CEMIPQ8WUJ3 1361 aa22.21■■□□□ 1.15
PHF1-207ENST00000479029 A0A087WZG4 1122 aa22.2■■□□□ 1.14
PHF1-207ENST00000479029 BTBD11A6QL63 1104 aa22.2■■□□□ 1.14
PHF1-207ENST00000479029 NFIXQ14938 502 aa22.2■■□□□ 1.14
PHF1-207ENST00000479029 RTF1Q92541 710 aaKnown RBP22.2■■□□□ 1.14
PHF1-207ENST00000479029 HEG1Q9ULI3 1381 aa22.2■■□□□ 1.14
PHF1-207ENST00000479029 EIF5P55010 431 aaKnown RBP22.19■■□□□ 1.14
PHF1-207ENST00000479029 DALRD3Q5D0E6 543 aaKnown RBP22.19■■□□□ 1.14
PHF1-207ENST00000479029 N4BP2Q86UW6 1770 aaPredicted RBP22.19■■□□□ 1.14
PHF1-207ENST00000479029 VIRMAQ69YN4 1812 aaKnown RBP22.19■■□□□ 1.14
PHF1-207ENST00000479029 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
PHF1-207ENST00000479029 BCL2L12Q9HB09 334 aa22.17■■□□□ 1.14
PHF1-207ENST00000479029 CHRNA5P30532 468 aa22.16■■□□□ 1.14
PHF1-207ENST00000479029 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
PHF1-207ENST00000479029 UBR2Q8IWV8 1755 aa22.16■■□□□ 1.14
PHF1-207ENST00000479029 SERPINB2P05120 415 aa22.15■■□□□ 1.14
PHF1-207ENST00000479029 ZNF330Q9Y3S2 320 aaPredicted RBP22.15■■□□□ 1.14
PHF1-207ENST00000479029 KCNQ3O43525 872 aa22.14■■□□□ 1.13
PHF1-207ENST00000479029 HTATSF1O43719 755 aaKnown RBP22.14■■□□□ 1.13
PHF1-207ENST00000479029 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
PHF1-207ENST00000479029 MCM10Q7L590 875 aa22.14■■□□□ 1.13
PHF1-207ENST00000479029 NEFMP07197 916 aa22.13■■□□□ 1.13
PHF1-207ENST00000479029 BICDL1Q6ZP65 573 aa22.13■■□□□ 1.13
PHF1-207ENST00000479029 A1BGP04217 495 aa22.12■■□□□ 1.13
PHF1-207ENST00000479029 TBC1D2BQ9UPU7 963 aa22.12■■□□□ 1.13
PHF1-207ENST00000479029 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
PHF1-207ENST00000479029 DCTN1Q14203 1278 aa22.1■■□□□ 1.13
PHF1-207ENST00000479029 SIPA1L3O60292 1781 aaPredicted RBP22.1■■□□□ 1.13
PHF1-207ENST00000479029 C9orf131Q5VYM1 1079 aa22.09■■□□□ 1.13
PHF1-207ENST00000479029 TBC1D9BQ66K14 1250 aa22.09■■□□□ 1.13
PHF1-207ENST00000479029 USP16Q9Y5T5 823 aa22.09■■□□□ 1.13
PHF1-207ENST00000479029 H0YIN7 160 aa22.08■■□□□ 1.13
PHF1-207ENST00000479029 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.13
PHF1-207ENST00000479029 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
PHF1-207ENST00000479029 C2CD5Q86YS7 1000 aa22.07■■□□□ 1.12
PHF1-207ENST00000479029 CEP350Q5VT06 3117 aa22.07■■□□□ 1.12
PHF1-207ENST00000479029 KIF3CO14782 793 aa22.06■■□□□ 1.12
PHF1-207ENST00000479029 TTLL6Q8N841 843 aa22.06■■□□□ 1.12
PHF1-207ENST00000479029 SETDB2Q96T68 719 aa22.06■■□□□ 1.12
PHF1-207ENST00000479029 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
PHF1-207ENST00000479029 PRAMEF22A3QJZ6 481 aa22.05■■□□□ 1.12
PHF1-207ENST00000479029 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
PHF1-207ENST00000479029 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
PHF1-207ENST00000479029 CARMIL3Q8ND23 1372 aa22.04■■□□□ 1.12
PHF1-207ENST00000479029 BRIP1Q9BX63 1249 aa22.04■■□□□ 1.12
PHF1-207ENST00000479029 RNF181Q9P0P0 153 aa22.04■■□□□ 1.12
PHF1-207ENST00000479029 PDZRN3Q9UPQ7 1066 aa22.04■■□□□ 1.12
PHF1-207ENST00000479029 ARFGEF1Q9Y6D6 1849 aa22.03■■□□□ 1.12
PHF1-207ENST00000479029 PDE6BP35913 854 aa22.03■■□□□ 1.12
PHF1-207ENST00000479029 PIP4K2AP48426 406 aaPredicted RBP22.03■■□□□ 1.12
PHF1-207ENST00000479029 PLEKHF1Q96S99 279 aa22.03■■□□□ 1.12
PHF1-207ENST00000479029 MIS18AQ9NYP9 233 aa22.03■■□□□ 1.12
PHF1-207ENST00000479029 AFDNP55196 1824 aaKnown RBP22.03■■□□□ 1.12
PHF1-207ENST00000479029 NRXN2Q9P2S2 1712 aa22.03■■□□□ 1.12
PHF1-207ENST00000479029 NPHP1O15259 732 aa22.02■■□□□ 1.12
PHF1-207ENST00000479029 PRR5LQ6MZQ0 368 aa22.02■■□□□ 1.12
PHF1-207ENST00000479029 PNISRQ8TF01 805 aaKnown RBP22.02■■□□□ 1.12
PHF1-207ENST00000479029 RALBP1Q15311 655 aa22.01■■□□□ 1.11
PHF1-207ENST00000479029 NFE2L2Q16236 605 aa22.01■■□□□ 1.11
PHF1-207ENST00000479029 CLEC4GQ6UXB4 293 aa22.01■■□□□ 1.11
PHF1-207ENST00000479029 CNBD1Q8NA66 436 aa22.01■■□□□ 1.11
PHF1-207ENST00000479029 HSPA6P17066 643 aa22■■□□□ 1.11
PHF1-207ENST00000479029 CCDC24Q8N4L8 307 aa22■■□□□ 1.11
PHF1-207ENST00000479029 NMRK2Q9NPI5 230 aa22■■□□□ 1.11
PHF1-207ENST00000479029 ZNF652Q9Y2D9 606 aa22■■□□□ 1.11
PHF1-207ENST00000479029 MAPK8IP3Q9UPT6 1336 aa22■■□□□ 1.11
PHF1-207ENST00000479029 NBPF26B4DH59 902 aa21.99■■□□□ 1.11
PHF1-207ENST00000479029 TOMM70O94826 608 aa21.99■■□□□ 1.11
PHF1-207ENST00000479029 NBPF10Q6P3W6 841 aaKnown RBP21.99■■□□□ 1.11
PHF1-207ENST00000479029 NBPF15Q8N660 670 aa21.99■■□□□ 1.11
PHF1-207ENST00000479029 ZNF622Q969S3 477 aaKnown RBP eCLIP21.99■■□□□ 1.11
PHF1-207ENST00000479029 KDM2BQ8NHM5 1336 aa21.99■■□□□ 1.11
PHF1-207ENST00000479029 ST5P78524 1137 aa21.98■■□□□ 1.11
PHF1-207ENST00000479029 LMNB1P20700 586 aa21.97■■□□□ 1.11
PHF1-207ENST00000479029 RASSF7Q02833 373 aa21.97■■□□□ 1.11
PHF1-207ENST00000479029 SCN7AQ01118 1682 aa21.97■■□□□ 1.11
PHF1-207ENST00000479029 RGL2O15211 777 aa21.96■■□□□ 1.11
PHF1-207ENST00000479029 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
PHF1-207ENST00000479029 NBPF5PQ86XG9 351 aaPredicted RBP21.96■■□□□ 1.11
PHF1-207ENST00000479029 C16orf71Q8IYS4 520 aaPredicted RBP21.95■■□□□ 1.1
PHF1-207ENST00000479029 THUMPD2Q9BTF0 503 aaKnown RBP21.95■■□□□ 1.1
PHF1-207ENST00000479029 EIF4A1P60842 406 aaKnown RBP21.94■■□□□ 1.1
PHF1-207ENST00000479029 ZC3H4Q9UPT8 1303 aaKnown RBP21.94■■□□□ 1.1
PHF1-207ENST00000479029 TPTE2Q6XPS3 522 aa21.93■■□□□ 1.1
PHF1-207ENST00000479029 CNKSR1Q969H4 720 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms