RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, human

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF1-209	ENST00000478424	IL17RE	Q8NFR9	667 aa		33.32	■■■□□ 2.92
ARF1-209	ENST00000478424	NUDC	Q9Y266	331 aa		33.32	■■■□□ 2.92
ARF1-209	ENST00000478424	UBR2	Q8IWV8	1755 aa		33.3	■■■□□ 2.92
ARF1-209	ENST00000478424	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.3	■■■□□ 2.92
ARF1-209	ENST00000478424	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.3	■■■□□ 2.92
ARF1-209	ENST00000478424	VSIG10	Q8N0Z9	540 aa		33.3	■■■□□ 2.92
ARF1-209	ENST00000478424	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.3	■■■□□ 2.92
ARF1-209	ENST00000478424	POLRMT	O00411	1230 aa	Known RBP	33.29	■■■□□ 2.92
ARF1-209	ENST00000478424	PPP2R1A	P30153	589 aa		33.29	■■■□□ 2.92
ARF1-209	ENST00000478424	PHACTR3	Q96KR7	559 aa		33.29	■■■□□ 2.92
ARF1-209	ENST00000478424	RSPH6A	Q9H0K4	717 aa		33.29	■■■□□ 2.92
ARF1-209	ENST00000478424	STARD3NL	O95772	234 aa		33.28	■■■□□ 2.92
ARF1-209	ENST00000478424	ZNF496	Q96IT1	587 aa	Predicted RBP	33.28	■■■□□ 2.92
ARF1-209	ENST00000478424	NARF	Q9UHQ1	456 aa		33.28	■■■□□ 2.92
ARF1-209	ENST00000478424	ZNF790	Q6PG37	636 aa		33.26	■■■□□ 2.91
ARF1-209	ENST00000478424	PIM2	Q9P1W9	311 aa		33.26	■■■□□ 2.91
ARF1-209	ENST00000478424	CHRNA5	P30532	468 aa		33.25	■■■□□ 2.91
ARF1-209	ENST00000478424	TM4SF1	P30408	202 aa		33.24	■■■□□ 2.91
ARF1-209	ENST00000478424	NFIX	Q14938	502 aa		33.24	■■■□□ 2.91
ARF1-209	ENST00000478424	HEG1	Q9ULI3	1381 aa		33.23	■■■□□ 2.91
ARF1-209	ENST00000478424	BRCA1	P38398	1863 aa	Known RBP	33.23	■■■□□ 2.91
ARF1-209	ENST00000478424	DALRD3	Q5D0E6	543 aa	Known RBP	33.23	■■■□□ 2.91
ARF1-209	ENST00000478424	BICDL1	Q6ZP65	573 aa		33.23	■■■□□ 2.91
ARF1-209	ENST00000478424	KCNA3	P22001	575 aa		33.22	■■■□□ 2.91
ARF1-209	ENST00000478424	FMNL2	Q96PY5	1086 aa		33.21	■■■□□ 2.91
ARF1-209	ENST00000478424	SIPA1L3	O60292	1781 aa	Predicted RBP	33.21	■■■□□ 2.91
ARF1-209	ENST00000478424	BTBD11	A6QL63	1104 aa		33.2	■■■□□ 2.91
ARF1-209	ENST00000478424	RTF1	Q92541	710 aa	Known RBP	33.2	■■■□□ 2.91
ARF1-209	ENST00000478424	BCL2L12	Q9HB09	334 aa		33.19	■■■□□ 2.9
ARF1-209	ENST00000478424	CEMIP	Q8WUJ3	1361 aa		33.19	■■■□□ 2.9
ARF1-209	ENST00000478424		A0A087WZG4	1122 aa		33.18	■■■□□ 2.9
ARF1-209	ENST00000478424	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.18	■■■□□ 2.9
ARF1-209	ENST00000478424	KCNQ3	O43525	872 aa		33.17	■■■□□ 2.9
ARF1-209	ENST00000478424	SERPINB2	P05120	415 aa		33.17	■■■□□ 2.9
ARF1-209	ENST00000478424	MCM10	Q7L590	875 aa		33.17	■■■□□ 2.9
ARF1-209	ENST00000478424	NPM2	Q86SE8	214 aa	Known RBP	33.17	■■■□□ 2.9
ARF1-209	ENST00000478424	AFDN	P55196	1824 aa	Known RBP	33.16	■■■□□ 2.9
ARF1-209	ENST00000478424	EIF5	P55010	431 aa	Known RBP	33.16	■■■□□ 2.9
ARF1-209	ENST00000478424	ARFGEF1	Q9Y6D6	1849 aa		33.16	■■■□□ 2.9
ARF1-209	ENST00000478424	TBC1D2B	Q9UPU7	963 aa		33.15	■■■□□ 2.9
ARF1-209	ENST00000478424	C9orf131	Q5VYM1	1079 aa		33.14	■■■□□ 2.9
ARF1-209	ENST00000478424	A1BG	P04217	495 aa		33.12	■■■□□ 2.89
ARF1-209	ENST00000478424	DCTN1	Q14203	1278 aa		33.12	■■■□□ 2.89
ARF1-209	ENST00000478424	TBC1D9B	Q66K14	1250 aa		33.1	■■■□□ 2.89
ARF1-209	ENST00000478424	CARMIL3	Q8ND23	1372 aa		33.09	■■■□□ 2.89
ARF1-209	ENST00000478424	NEFM	P07197	916 aa		33.09	■■■□□ 2.89
ARF1-209	ENST00000478424	IL6ST	P40189	918 aa	Predicted RBP	33.09	■■■□□ 2.89
ARF1-209	ENST00000478424	PIP4K2A	P48426	406 aa	Predicted RBP	33.09	■■■□□ 2.89
ARF1-209	ENST00000478424	C2CD5	Q86YS7	1000 aa		33.09	■■■□□ 2.89
ARF1-209	ENST00000478424	RNF181	Q9P0P0	153 aa		33.09	■■■□□ 2.89
ARF1-209	ENST00000478424	SCN7A	Q01118	1682 aa		33.09	■■■□□ 2.89
ARF1-209	ENST00000478424	KIF3C	O14782	793 aa		33.08	■■■□□ 2.89
ARF1-209	ENST00000478424	NPHP1	O15259	732 aa		33.08	■■■□□ 2.89
ARF1-209	ENST00000478424	NRXN2	Q9P2S2	1712 aa		33.08	■■■□□ 2.89
ARF1-209	ENST00000478424	PRAMEF22	A3QJZ6	481 aa		33.06	■■■□□ 2.88
ARF1-209	ENST00000478424	CCDC24	Q8N4L8	307 aa		33.05	■■■□□ 2.88
ARF1-209	ENST00000478424	RASSF7	Q02833	373 aa		33.04	■■■□□ 2.88
ARF1-209	ENST00000478424	NMRK2	Q9NPI5	230 aa		33.04	■■■□□ 2.88
ARF1-209	ENST00000478424	USP16	Q9Y5T5	823 aa		33.04	■■■□□ 2.88
ARF1-209	ENST00000478424		H0YIN7	160 aa		33.03	■■■□□ 2.88
ARF1-209	ENST00000478424	DZIP3	Q86Y13	1208 aa	Known RBP	33.03	■■■□□ 2.88
ARF1-209	ENST00000478424	SNRPA1	P09661	255 aa	Known RBP	33.01	■■■□□ 2.87
ARF1-209	ENST00000478424	HSPA6	P17066	643 aa		33.01	■■■□□ 2.87
ARF1-209	ENST00000478424	TTLL6	Q8N841	843 aa		33.01	■■■□□ 2.87
ARF1-209	ENST00000478424	CAMTA2	O94983	1202 aa		33	■■■□□ 2.87
ARF1-209	ENST00000478424	ZNF622	Q969S3	477 aa	Known RBP eCLIP	33	■■■□□ 2.87
ARF1-209	ENST00000478424	DLEC1	Q9Y238	1755 aa		32.99	■■■□□ 2.87
ARF1-209	ENST00000478424	SETDB2	Q96T68	719 aa		32.99	■■■□□ 2.87
ARF1-209	ENST00000478424	MIS18A	Q9NYP9	233 aa		32.99	■■■□□ 2.87
ARF1-209	ENST00000478424	HTATSF1	O43719	755 aa	Known RBP	32.98	■■■□□ 2.87
ARF1-209	ENST00000478424	PRR5L	Q6MZQ0	368 aa		32.98	■■■□□ 2.87
ARF1-209	ENST00000478424	CNBD1	Q8NA66	436 aa		32.98	■■■□□ 2.87
ARF1-209	ENST00000478424	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.98	■■■□□ 2.87
ARF1-209	ENST00000478424	TAF7	Q15545	349 aa	Predicted RBP	32.96	■■■□□ 2.87
ARF1-209	ENST00000478424	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.96	■■■□□ 2.87
ARF1-209	ENST00000478424	CEP350	Q5VT06	3117 aa		32.95	■■■□□ 2.87
ARF1-209	ENST00000478424	ANKRD31	Q8N7Z5	1873 aa		32.95	■■■□□ 2.87
ARF1-209	ENST00000478424	PDE6B	P35913	854 aa		32.95	■■■□□ 2.87
ARF1-209	ENST00000478424	BCOR	Q6W2J9	1755 aa		32.95	■■■□□ 2.87
ARF1-209	ENST00000478424	MAPK8IP3	Q9UPT6	1336 aa		32.95	■■■□□ 2.86
ARF1-209	ENST00000478424	BRIP1	Q9BX63	1249 aa		32.94	■■■□□ 2.86
ARF1-209	ENST00000478424	KDM2B	Q8NHM5	1336 aa		32.94	■■■□□ 2.86
ARF1-209	ENST00000478424	ST5	P78524	1137 aa		32.93	■■■□□ 2.86
ARF1-209	ENST00000478424	SBF1	O95248	1867 aa		32.93	■■■□□ 2.86
ARF1-209	ENST00000478424	TOMM70	O94826	608 aa		32.92	■■■□□ 2.86
ARF1-209	ENST00000478424	THUMPD2	Q9BTF0	503 aa	Known RBP	32.92	■■■□□ 2.86
ARF1-209	ENST00000478424	ZNF652	Q9Y2D9	606 aa		32.92	■■■□□ 2.86
ARF1-209	ENST00000478424	DLG5	Q8TDM6	1919 aa		32.92	■■■□□ 2.86
ARF1-209	ENST00000478424	COL11A2	P13942	1736 aa	Predicted RBP	32.91	■■■□□ 2.86
ARF1-209	ENST00000478424	NFE2L2	Q16236	605 aa		32.9	■■■□□ 2.86
ARF1-209	ENST00000478424	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.9	■■■□□ 2.86
ARF1-209	ENST00000478424	LMNB1	P20700	586 aa		32.89	■■■□□ 2.86
ARF1-209	ENST00000478424	NBPF26	B4DH59	902 aa		32.88	■■■□□ 2.85
ARF1-209	ENST00000478424	NBPF10	Q6P3W6	841 aa	Known RBP	32.88	■■■□□ 2.85
ARF1-209	ENST00000478424	NBPF15	Q8N660	670 aa		32.88	■■■□□ 2.85
ARF1-209	ENST00000478424	PLEKHF1	Q96S99	279 aa		32.88	■■■□□ 2.85
ARF1-209	ENST00000478424	PDZRN3	Q9UPQ7	1066 aa		32.88	■■■□□ 2.85
ARF1-209	ENST00000478424	C21orf2	O43822	256 aa		32.87	■■■□□ 2.85
ARF1-209	ENST00000478424	NGEF	Q8N5V2	710 aa		32.87	■■■□□ 2.85
ARF1-209	ENST00000478424	PNISR	Q8TF01	805 aa	Known RBP	32.87	■■■□□ 2.85

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