RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 YBX3P16989 372 aaKnown RBP eCLIP18.31■□□□□ 0.52
HDAC7-222ENST00000477937 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
HDAC7-222ENST00000477937 ZBTB1Q9Y2K1 713 aa18.31■□□□□ 0.52
HDAC7-222ENST00000477937 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
HDAC7-222ENST00000477937 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
HDAC7-222ENST00000477937 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
HDAC7-222ENST00000477937 COL15A1P39059 1388 aa18.3■□□□□ 0.52
HDAC7-222ENST00000477937 KCNQ3O43525 872 aa18.29■□□□□ 0.52
HDAC7-222ENST00000477937 FKBP8Q14318 412 aa18.29■□□□□ 0.52
HDAC7-222ENST00000477937 N4BP2Q86UW6 1770 aaPredicted RBP18.29■□□□□ 0.52
HDAC7-222ENST00000477937 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
HDAC7-222ENST00000477937 TGFB2P61812 414 aa18.28■□□□□ 0.52
HDAC7-222ENST00000477937 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
HDAC7-222ENST00000477937 USPL1Q5W0Q7 1092 aa18.28■□□□□ 0.52
HDAC7-222ENST00000477937 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
HDAC7-222ENST00000477937 UTRNP46939 3433 aa18.27■□□□□ 0.52
HDAC7-222ENST00000477937 NFE2L2Q16236 605 aa18.27■□□□□ 0.52
HDAC7-222ENST00000477937 A0A087WZG4 1122 aa18.26■□□□□ 0.51
HDAC7-222ENST00000477937 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
HDAC7-222ENST00000477937 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
HDAC7-222ENST00000477937 TM4SF1P30408 202 aa18.25■□□□□ 0.51
HDAC7-222ENST00000477937 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
HDAC7-222ENST00000477937 KIAA1551Q9HCM1 1747 aa18.25■□□□□ 0.51
HDAC7-222ENST00000477937 AFDNP55196 1824 aaKnown RBP18.24■□□□□ 0.51
HDAC7-222ENST00000477937 A1BGP04217 495 aa18.24■□□□□ 0.51
HDAC7-222ENST00000477937 SNRPA1P09661 255 aaKnown RBP18.24■□□□□ 0.51
HDAC7-222ENST00000477937 IL6STP40189 918 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-222ENST00000477937 DDR1Q08345 913 aa18.24■□□□□ 0.51
HDAC7-222ENST00000477937 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
HDAC7-222ENST00000477937 ZNF330Q9Y3S2 320 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-222ENST00000477937 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
HDAC7-222ENST00000477937 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
HDAC7-222ENST00000477937 PXDNLA1KZ92 1463 aa18.23■□□□□ 0.51
HDAC7-222ENST00000477937 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
HDAC7-222ENST00000477937 POLRMTO00411 1230 aaKnown RBP18.23■□□□□ 0.51
HDAC7-222ENST00000477937 ZNF784Q8NCA9 323 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-222ENST00000477937 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
HDAC7-222ENST00000477937 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-222ENST00000477937 BCL2L12Q9HB09 334 aa18.22■□□□□ 0.51
HDAC7-222ENST00000477937 BRCA1P38398 1863 aaKnown RBP18.22■□□□□ 0.51
HDAC7-222ENST00000477937 NFIXQ14938 502 aa18.21■□□□□ 0.51
HDAC7-222ENST00000477937 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
HDAC7-222ENST00000477937 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
HDAC7-222ENST00000477937 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
HDAC7-222ENST00000477937 DPEP1P16444 411 aa18.2■□□□□ 0.5
HDAC7-222ENST00000477937 RIPK4P57078 832 aa18.2■□□□□ 0.5
HDAC7-222ENST00000477937 WDR43Q15061 677 aaKnown RBP eCLIP18.2■□□□□ 0.5
HDAC7-222ENST00000477937 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
HDAC7-222ENST00000477937 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
HDAC7-222ENST00000477937 THUMPD2Q9BTF0 503 aaKnown RBP18.19■□□□□ 0.5
HDAC7-222ENST00000477937 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
HDAC7-222ENST00000477937 LAMB4A4D0S4 1761 aa18.18■□□□□ 0.5
HDAC7-222ENST00000477937 SERPINB2P05120 415 aa18.18■□□□□ 0.5
HDAC7-222ENST00000477937 TMPOP42166 694 aaKnown RBP18.18■□□□□ 0.5
HDAC7-222ENST00000477937 BCS1LQ9Y276 419 aa18.18■□□□□ 0.5
HDAC7-222ENST00000477937 ARFGEF1Q9Y6D6 1849 aa18.17■□□□□ 0.5
HDAC7-222ENST00000477937 LMOD3Q0VAK6 560 aa18.17■□□□□ 0.5
HDAC7-222ENST00000477937 BICDL1Q6ZP65 573 aa18.17■□□□□ 0.5
HDAC7-222ENST00000477937 PIM2Q9P1W9 311 aa18.17■□□□□ 0.5
HDAC7-222ENST00000477937 BCORQ6W2J9 1755 aa18.17■□□□□ 0.5
HDAC7-222ENST00000477937 KCNA3P22001 575 aa18.16■□□□□ 0.5
HDAC7-222ENST00000477937 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
HDAC7-222ENST00000477937 TBC1D9BQ66K14 1250 aa18.16■□□□□ 0.5
HDAC7-222ENST00000477937 DZIP3Q86Y13 1208 aaKnown RBP18.16■□□□□ 0.5
HDAC7-222ENST00000477937 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
HDAC7-222ENST00000477937 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
HDAC7-222ENST00000477937 CAMTA2O94983 1202 aa18.15■□□□□ 0.5
HDAC7-222ENST00000477937 EIF4A1P60842 406 aaKnown RBP18.15■□□□□ 0.5
HDAC7-222ENST00000477937 GIGYF1O75420 1035 aaPredicted RBP18.14■□□□□ 0.49
HDAC7-222ENST00000477937 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
HDAC7-222ENST00000477937 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
HDAC7-222ENST00000477937 CHRNA5P30532 468 aa18.13■□□□□ 0.49
HDAC7-222ENST00000477937 NEUROD2Q15784 382 aa18.13■□□□□ 0.49
HDAC7-222ENST00000477937 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
HDAC7-222ENST00000477937 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
HDAC7-222ENST00000477937 SETDB2Q96T68 719 aa18.13■□□□□ 0.49
HDAC7-222ENST00000477937 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
HDAC7-222ENST00000477937 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
HDAC7-222ENST00000477937 CARMIL3Q8ND23 1372 aa18.13■□□□□ 0.49
HDAC7-222ENST00000477937 DALRD3Q5D0E6 543 aaKnown RBP18.12■□□□□ 0.49
HDAC7-222ENST00000477937 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
HDAC7-222ENST00000477937 ARHGAP27Q6ZUM4 889 aa18.12■□□□□ 0.49
HDAC7-222ENST00000477937 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
HDAC7-222ENST00000477937 ZNF652Q9Y2D9 606 aa18.12■□□□□ 0.49
HDAC7-222ENST00000477937 DLEC1Q9Y238 1755 aa18.12■□□□□ 0.49
HDAC7-222ENST00000477937 ZNF316A6NFI3 1004 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-222ENST00000477937 ANKRD31Q8N7Z5 1873 aa18.1■□□□□ 0.49
HDAC7-222ENST00000477937 H0YIN7 160 aa18.09■□□□□ 0.49
HDAC7-222ENST00000477937 NPHP1O15259 732 aa18.09■□□□□ 0.49
HDAC7-222ENST00000477937 NUP98P52948 1817 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 RGL2O15211 777 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 PDE6BP35913 854 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 C2CD5Q86YS7 1000 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 NGEFQ8N5V2 710 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 CNBD1Q8NA66 436 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 BRIP1Q9BX63 1249 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 TRIM35Q9UPQ4 493 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.48
HDAC7-222ENST00000477937 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms