RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 RPS6KA4O75676 772 aa18.61■□□□□ 0.57
SRRT-210ENST00000477529 CYP19A1P11511 503 aaPredicted RBP18.61■□□□□ 0.57
SRRT-210ENST00000477529 MSL1Q68DK7 614 aa18.61■□□□□ 0.57
SRRT-210ENST00000477529 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
SRRT-210ENST00000477529 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
SRRT-210ENST00000477529 ANP32CO43423 234 aa18.6■□□□□ 0.57
SRRT-210ENST00000477529 ADRA2BP18089 450 aa18.6■□□□□ 0.57
SRRT-210ENST00000477529 TMPOP42166 694 aaKnown RBP18.6■□□□□ 0.57
SRRT-210ENST00000477529 INTS5Q6P9B9 1019 aaKnown RBP18.6■□□□□ 0.57
SRRT-210ENST00000477529 CCDC87Q9NVE4 849 aa18.6■□□□□ 0.57
SRRT-210ENST00000477529 COL15A1P39059 1388 aa18.59■□□□□ 0.57
SRRT-210ENST00000477529 SBF1O95248 1867 aa18.59■□□□□ 0.57
SRRT-210ENST00000477529 SOS1Q07889 1333 aaPredicted RBP18.59■□□□□ 0.57
SRRT-210ENST00000477529 RUNDC1Q96C34 613 aa18.59■□□□□ 0.57
SRRT-210ENST00000477529 FMNL2Q96PY5 1086 aa18.59■□□□□ 0.57
SRRT-210ENST00000477529 ARXQ96QS3 562 aa18.59■□□□□ 0.57
SRRT-210ENST00000477529 LAMB2P55268 1798 aa18.58■□□□□ 0.57
SRRT-210ENST00000477529 POLD1P28340 1107 aa18.58■□□□□ 0.56
SRRT-210ENST00000477529 RIPK4P57078 832 aa18.58■□□□□ 0.56
SRRT-210ENST00000477529 FHDC1Q9C0D6 1143 aaPredicted RBP18.58■□□□□ 0.56
SRRT-210ENST00000477529 ZBTB1Q9Y2K1 713 aa18.58■□□□□ 0.56
SRRT-210ENST00000477529 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
SRRT-210ENST00000477529 TRAPPC3LQ5T215 181 aa18.57■□□□□ 0.56
SRRT-210ENST00000477529 ARHGEF1Q92888 912 aaKnown RBP18.57■□□□□ 0.56
SRRT-210ENST00000477529 RRP7AQ9Y3A4 280 aaKnown RBP18.57■□□□□ 0.56
SRRT-210ENST00000477529 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
SRRT-210ENST00000477529 MIS18AQ9NYP9 233 aa18.55■□□□□ 0.56
SRRT-210ENST00000477529 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
SRRT-210ENST00000477529 RFC4P35249 363 aa18.54■□□□□ 0.56
SRRT-210ENST00000477529 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
SRRT-210ENST00000477529 SYT17Q9BSW7 474 aa18.54■□□□□ 0.56
SRRT-210ENST00000477529 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
SRRT-210ENST00000477529 STARD3NLO95772 234 aa18.53■□□□□ 0.56
SRRT-210ENST00000477529 GYS1P13807 737 aa18.53■□□□□ 0.56
SRRT-210ENST00000477529 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
SRRT-210ENST00000477529 TEX13AQ9BXU3 409 aaPredicted RBP18.53■□□□□ 0.56
SRRT-210ENST00000477529 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
SRRT-210ENST00000477529 MYH3P11055 1940 aa18.53■□□□□ 0.56
SRRT-210ENST00000477529 SRP68Q9UHB9 627 aaKnown RBP18.52■□□□□ 0.56
SRRT-210ENST00000477529 DICER1Q9UPY3 1922 aaKnown RBP18.52■□□□□ 0.56
SRRT-210ENST00000477529 C10orf71Q711Q0 1435 aa18.51■□□□□ 0.55
SRRT-210ENST00000477529 SNRPA1P09661 255 aaKnown RBP18.51■□□□□ 0.55
SRRT-210ENST00000477529 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
SRRT-210ENST00000477529 APAF1O14727 1248 aa18.5■□□□□ 0.55
SRRT-210ENST00000477529 CANXP27824 592 aaKnown RBP18.5■□□□□ 0.55
SRRT-210ENST00000477529 EIF5P55010 431 aaKnown RBP18.5■□□□□ 0.55
SRRT-210ENST00000477529 KLHL34Q8N239 644 aa18.5■□□□□ 0.55
SRRT-210ENST00000477529 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
SRRT-210ENST00000477529 A1BGP04217 495 aa18.49■□□□□ 0.55
SRRT-210ENST00000477529 EIF4A1P60842 406 aaKnown RBP18.49■□□□□ 0.55
SRRT-210ENST00000477529 TNRC6CQ9HCJ0 1690 aaKnown RBP18.48■□□□□ 0.55
SRRT-210ENST00000477529 MMP10P09238 476 aa18.48■□□□□ 0.55
SRRT-210ENST00000477529 NLGN1Q8N2Q7 840 aa18.48■□□□□ 0.55
SRRT-210ENST00000477529 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
SRRT-210ENST00000477529 TSPYL4Q9UJ04 414 aa18.48■□□□□ 0.55
SRRT-210ENST00000477529 TAF1P21675 1872 aa18.48■□□□□ 0.55
SRRT-210ENST00000477529 FER1L6Q2WGJ9 1857 aa18.48■□□□□ 0.55
SRRT-210ENST00000477529 GIGYF1O75420 1035 aaPredicted RBP18.47■□□□□ 0.55
SRRT-210ENST00000477529 IL6STP40189 918 aaPredicted RBP18.47■□□□□ 0.55
SRRT-210ENST00000477529 FKBP8Q14318 412 aa18.47■□□□□ 0.55
SRRT-210ENST00000477529 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
SRRT-210ENST00000477529 NLGN2Q8NFZ4 835 aa18.47■□□□□ 0.55
SRRT-210ENST00000477529 PXDNLA1KZ92 1463 aa18.46■□□□□ 0.55
SRRT-210ENST00000477529 DDX60Q8IY21 1712 aaKnown RBP18.46■□□□□ 0.55
SRRT-210ENST00000477529 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
SRRT-210ENST00000477529 BCL2L12Q9HB09 334 aa18.46■□□□□ 0.55
SRRT-210ENST00000477529 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
SRRT-210ENST00000477529 ZPR1O75312 459 aa18.45■□□□□ 0.54
SRRT-210ENST00000477529 SLX4Q8IY92 1834 aa18.44■□□□□ 0.54
SRRT-210ENST00000477529 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
SRRT-210ENST00000477529 DDR1Q08345 913 aa18.44■□□□□ 0.54
SRRT-210ENST00000477529 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
SRRT-210ENST00000477529 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
SRRT-210ENST00000477529 ZNF330Q9Y3S2 320 aaPredicted RBP18.44■□□□□ 0.54
SRRT-210ENST00000477529 CD2APQ9Y5K6 639 aa18.44■□□□□ 0.54
SRRT-210ENST00000477529 CHL1O00533 1208 aa18.43■□□□□ 0.54
SRRT-210ENST00000477529 A0A087WZG4 1122 aa18.42■□□□□ 0.54
SRRT-210ENST00000477529 TIAM2Q8IVF5 1701 aa18.41■□□□□ 0.54
SRRT-210ENST00000477529 POLRMTO00411 1230 aaKnown RBP18.41■□□□□ 0.54
SRRT-210ENST00000477529 TBC1D2BQ9UPU7 963 aa18.41■□□□□ 0.54
SRRT-210ENST00000477529 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
SRRT-210ENST00000477529 SPEF2Q9C093 1822 aa18.41■□□□□ 0.54
SRRT-210ENST00000477529 SENP3-EIF4A1A0A087X0R7 540 aa18.4■□□□□ 0.54
SRRT-210ENST00000477529 CAMTA2O94983 1202 aa18.4■□□□□ 0.54
SRRT-210ENST00000477529 TM4SF1P30408 202 aa18.4■□□□□ 0.54
SRRT-210ENST00000477529 NFIXQ14938 502 aa18.4■□□□□ 0.54
SRRT-210ENST00000477529 KRT24Q2M2I5 525 aa18.4■□□□□ 0.54
SRRT-210ENST00000477529 CFAP44Q96MT7 982 aa18.4■□□□□ 0.54
SRRT-210ENST00000477529 LAS1LQ9Y4W2 734 aaKnown RBP18.4■□□□□ 0.54
SRRT-210ENST00000477529 ZNF853P0CG23 659 aa18.39■□□□□ 0.53
SRRT-210ENST00000477529 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.53
SRRT-210ENST00000477529 ERBB4Q15303 1308 aa18.39■□□□□ 0.53
SRRT-210ENST00000477529 CARMIL3Q8ND23 1372 aa18.39■□□□□ 0.53
SRRT-210ENST00000477529 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
SRRT-210ENST00000477529 IFT57Q9NWB7 429 aa18.38■□□□□ 0.53
SRRT-210ENST00000477529 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
SRRT-210ENST00000477529 TBC1D9BQ66K14 1250 aa18.37■□□□□ 0.53
SRRT-210ENST00000477529 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
SRRT-210ENST00000477529 CALD1Q05682 793 aaKnown RBP18.36■□□□□ 0.53
SRRT-210ENST00000477529 FAM9BQ8IZU0 186 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms