RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 GDPD2Q9HCC8 539 aa7.46□□□□□ -1.22
NSMCE4A-208ENST00000477289 CHIC2Q9UKJ5 165 aa7.46□□□□□ -1.22
NSMCE4A-208ENST00000477289 STAU1O95793 577 aaKnown RBP7.45□□□□□ -1.22
NSMCE4A-208ENST00000477289 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
NSMCE4A-208ENST00000477289 AMPD1P23109 780 aa7.45□□□□□ -1.22
NSMCE4A-208ENST00000477289 CD163Q86VB7 1156 aa7.45□□□□□ -1.22
NSMCE4A-208ENST00000477289 FGD5Q6ZNL6 1462 aa7.44□□□□□ -1.22
NSMCE4A-208ENST00000477289 CUX1P39880 1505 aa7.44□□□□□ -1.22
NSMCE4A-208ENST00000477289 ITGB7P26010 798 aa7.44□□□□□ -1.22
NSMCE4A-208ENST00000477289 UBAP2LQ14157 1087 aaKnown RBP7.44□□□□□ -1.22
NSMCE4A-208ENST00000477289 PRM3Q9NNZ6 103 aa7.44□□□□□ -1.22
NSMCE4A-208ENST00000477289 DOLKQ9UPQ8 538 aa7.44□□□□□ -1.22
NSMCE4A-208ENST00000477289 POLA1P09884 1462 aaPredicted RBP7.43□□□□□ -1.22
NSMCE4A-208ENST00000477289 TOP2BQ02880 1626 aa7.43□□□□□ -1.22
NSMCE4A-208ENST00000477289 C2CD2LO14523 706 aa7.43□□□□□ -1.22
NSMCE4A-208ENST00000477289 GNB5O14775 395 aa7.43□□□□□ -1.22
NSMCE4A-208ENST00000477289 PHKA2P46019 1235 aa7.43□□□□□ -1.22
NSMCE4A-208ENST00000477289 RNF135Q8IUD6 432 aa7.43□□□□□ -1.22
NSMCE4A-208ENST00000477289 GGA1Q9UJY5 639 aa7.43□□□□□ -1.22
NSMCE4A-208ENST00000477289 PIK3R2O00459 728 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 BMP4P12644 408 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 PRKCSHP14314 528 aaPredicted RBP7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 ABL2P42684 1182 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 CHRNA4P43681 627 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 USP4Q13107 963 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 MCM6Q14566 821 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 SLFNL1Q499Z3 407 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 SLCO4C1Q6ZQN7 724 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 ZSCAN10Q96SZ4 725 aaPredicted RBP7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 ETNK1Q9HBU6 452 aa7.42□□□□□ -1.22
NSMCE4A-208ENST00000477289 BIVM-ERCC5R4GMW8 1640 aa7.41□□□□□ -1.22
NSMCE4A-208ENST00000477289 A0A1B0GTH6 734 aa7.41□□□□□ -1.22
NSMCE4A-208ENST00000477289 C4orf17Q53FE4 359 aa7.41□□□□□ -1.22
NSMCE4A-208ENST00000477289 OXLD1Q5BKU9 147 aa7.41□□□□□ -1.22
NSMCE4A-208ENST00000477289 BTBD6Q96KE9 485 aa7.41□□□□□ -1.22
NSMCE4A-208ENST00000477289 SEMA6BQ9H3T3 888 aa7.41□□□□□ -1.22
NSMCE4A-208ENST00000477289 ATXN7L1Q9ULK2 861 aaPredicted RBP7.41□□□□□ -1.22
NSMCE4A-208ENST00000477289 LBRQ14739 615 aaKnown RBP7.4□□□□□ -1.22
NSMCE4A-208ENST00000477289 ESCO1Q5FWF5 840 aa7.4□□□□□ -1.22
NSMCE4A-208ENST00000477289 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
NSMCE4A-208ENST00000477289 RUBCNLQ9H714 662 aa7.4□□□□□ -1.22
NSMCE4A-208ENST00000477289 SYNJ1O43426 1573 aa7.4□□□□□ -1.22
NSMCE4A-208ENST00000477289 RAD54L2Q9Y4B4 1467 aa7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 CSB-PGBD3P0DP91 1061 aa7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 EPXP11678 715 aa7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 DGKGP49619 791 aa7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 SCNN1DP51172 638 aa7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 CTBSQ01459 385 aa7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 DOC2BQ14184 412 aa7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 PGBD3Q8N328 593 aa7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 NOP53Q9NZM5 478 aaKnown RBP7.39□□□□□ -1.23
NSMCE4A-208ENST00000477289 WDR97A6NE52 1622 aa7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 TDRD9Q8NDG6 1382 aaKnown RBP7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 FGFR3P22607 806 aa7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 WASHC4Q2M389 1173 aa7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 GNASQ5JWF2 1037 aa7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 ZMYM1Q5SVZ6 1142 aa7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 TMEM214Q6NUQ4 689 aaKnown RBP7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 PPARGC1BQ86YN6 1023 aaKnown RBP7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 KRTAP1-3Q8IUG1 177 aa7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 NDFIP2Q9NV92 336 aa7.38□□□□□ -1.23
NSMCE4A-208ENST00000477289 ABCA10Q8WWZ4 1543 aa7.37□□□□□ -1.23
NSMCE4A-208ENST00000477289 KIF27Q86VH2 1401 aa7.37□□□□□ -1.23
NSMCE4A-208ENST00000477289 BNIP3LO60238 219 aa7.37□□□□□ -1.23
NSMCE4A-208ENST00000477289 MSX1P28360 303 aa7.37□□□□□ -1.23
NSMCE4A-208ENST00000477289 EFHC2Q5JST6 749 aa7.37□□□□□ -1.23
NSMCE4A-208ENST00000477289 PLPP7Q8NBV4 271 aa7.37□□□□□ -1.23
NSMCE4A-208ENST00000477289 COG6Q9Y2V7 657 aa7.37□□□□□ -1.23
NSMCE4A-208ENST00000477289 AQRO60306 1485 aaKnown RBP eCLIP7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 GAPVD1Q14C86 1478 aa7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 INHAP05111 366 aa7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 GDF10P55107 478 aa7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 TLR1Q15399 786 aa7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 MAP7D1Q3KQU3 841 aa7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 RHBDD1Q8TEB9 315 aa7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 CHMP7Q8WUX9 453 aaPredicted RBP7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 SIRT1Q96EB6 747 aa7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 TARBP1Q13395 1621 aaKnown RBP7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 GRIN2BQ13224 1484 aa7.36□□□□□ -1.23
NSMCE4A-208ENST00000477289 NEURL1BA8MQ27 555 aa7.35□□□□□ -1.23
NSMCE4A-208ENST00000477289 PIK3CDO00329 1044 aa7.35□□□□□ -1.23
NSMCE4A-208ENST00000477289 ARAFP10398 606 aa7.35□□□□□ -1.23
NSMCE4A-208ENST00000477289 GTF2E1P29083 439 aaPredicted RBP7.35□□□□□ -1.23
NSMCE4A-208ENST00000477289 SOX11P35716 441 aa7.35□□□□□ -1.23
NSMCE4A-208ENST00000477289 SEMA3FQ13275 785 aa7.35□□□□□ -1.23
NSMCE4A-208ENST00000477289 ZNF608Q9ULD9 1512 aaPredicted RBP7.35□□□□□ -1.23
NSMCE4A-208ENST00000477289 EIF4G3O43432 1585 aaKnown RBP7.34□□□□□ -1.23
NSMCE4A-208ENST00000477289 ZNF295-AS1Q8N0V1 137 aa7.34□□□□□ -1.23
NSMCE4A-208ENST00000477289 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
NSMCE4A-208ENST00000477289 GATA4P43694 442 aa7.33□□□□□ -1.24
NSMCE4A-208ENST00000477289 CHSY3Q70JA7 882 aa7.33□□□□□ -1.24
NSMCE4A-208ENST00000477289 POM121Q96HA1 1249 aa7.33□□□□□ -1.24
NSMCE4A-208ENST00000477289 CRISPLD1Q9H336 500 aa7.33□□□□□ -1.24
NSMCE4A-208ENST00000477289 MAGI1Q96QZ7 1491 aaPredicted RBP7.32□□□□□ -1.24
NSMCE4A-208ENST00000477289 PLA2G4AP47712 749 aa7.32□□□□□ -1.24
NSMCE4A-208ENST00000477289 SMTNP53814 917 aa7.32□□□□□ -1.24
NSMCE4A-208ENST00000477289 ALG2Q9H553 416 aa7.32□□□□□ -1.24
NSMCE4A-208ENST00000477289 PCDHGA11Q9Y5H2 935 aa7.32□□□□□ -1.24
NSMCE4A-208ENST00000477289 USP3Q9Y6I4 520 aa7.32□□□□□ -1.24
NSMCE4A-208ENST00000477289 EEA1Q15075 1411 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms