RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 WWC1Q8IX03 1113 aa23.25■■□□□ 1.31
SMIM4-202ENST00000476842 NGEFQ8N5V2 710 aa23.25■■□□□ 1.31
SMIM4-202ENST00000476842 LAS1LQ9Y4W2 734 aaKnown RBP23.25■■□□□ 1.31
SMIM4-202ENST00000476842 SENP3-EIF4A1A0A087X0R7 540 aa23.24■■□□□ 1.31
SMIM4-202ENST00000476842 GIGYF1O75420 1035 aaPredicted RBP23.24■■□□□ 1.31
SMIM4-202ENST00000476842 ZNF853P0CG23 659 aa23.24■■□□□ 1.31
SMIM4-202ENST00000476842 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
SMIM4-202ENST00000476842 TJP1Q07157 1748 aa23.24■■□□□ 1.31
SMIM4-202ENST00000476842 CASZ1Q86V15 1759 aa23.23■■□□□ 1.31
SMIM4-202ENST00000476842 PRAMEF22A3QJZ6 481 aa23.23■■□□□ 1.31
SMIM4-202ENST00000476842 ARHGEF1Q92888 912 aaKnown RBP23.23■■□□□ 1.31
SMIM4-202ENST00000476842 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
SMIM4-202ENST00000476842 ZBTB1Q9Y2K1 713 aa23.23■■□□□ 1.31
SMIM4-202ENST00000476842 GNAI1P63096 354 aa23.22■■□□□ 1.31
SMIM4-202ENST00000476842 COL5A3P25940 1745 aaPredicted RBP23.22■■□□□ 1.31
SMIM4-202ENST00000476842 QSER1Q2KHR3 1735 aa23.22■■□□□ 1.31
SMIM4-202ENST00000476842 A1BGP04217 495 aa23.21■■□□□ 1.31
SMIM4-202ENST00000476842 SOS1Q07889 1333 aaPredicted RBP23.2■■□□□ 1.3
SMIM4-202ENST00000476842 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
SMIM4-202ENST00000476842 RFC4P35249 363 aa23.2■■□□□ 1.3
SMIM4-202ENST00000476842 PTGER2P43116 358 aa23.2■■□□□ 1.3
SMIM4-202ENST00000476842 SALL2Q9Y467 1007 aaPredicted RBP23.2■■□□□ 1.3
SMIM4-202ENST00000476842 EIF5P55010 431 aaKnown RBP23.19■■□□□ 1.3
SMIM4-202ENST00000476842 SGIP1Q9BQI5 828 aa23.19■■□□□ 1.3
SMIM4-202ENST00000476842 MBIPQ9NS73 344 aa23.19■■□□□ 1.3
SMIM4-202ENST00000476842 IL16Q14005 1332 aa23.18■■□□□ 1.3
SMIM4-202ENST00000476842 IL6STP40189 918 aaPredicted RBP23.18■■□□□ 1.3
SMIM4-202ENST00000476842 WDR63Q8IWG1 891 aa23.18■■□□□ 1.3
SMIM4-202ENST00000476842 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
SMIM4-202ENST00000476842 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
SMIM4-202ENST00000476842 KDM3BQ7LBC6 1761 aa23.17■■□□□ 1.3
SMIM4-202ENST00000476842 MYH14Q7Z406 1995 aaKnown RBP23.17■■□□□ 1.3
SMIM4-202ENST00000476842 TUBGCP6Q96RT7 1819 aa23.17■■□□□ 1.3
SMIM4-202ENST00000476842 A0A087WZG4 1122 aa23.15■■□□□ 1.3
SMIM4-202ENST00000476842 GYS1P13807 737 aa23.14■■□□□ 1.29
SMIM4-202ENST00000476842 POLD1P28340 1107 aa23.14■■□□□ 1.29
SMIM4-202ENST00000476842 MSL1Q68DK7 614 aa23.14■■□□□ 1.29
SMIM4-202ENST00000476842 NLGN1Q8N2Q7 840 aa23.14■■□□□ 1.29
SMIM4-202ENST00000476842 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
SMIM4-202ENST00000476842 COL15A1P39059 1388 aa23.14■■□□□ 1.29
SMIM4-202ENST00000476842 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
SMIM4-202ENST00000476842 NBPF26B4DH59 902 aa23.13■■□□□ 1.29
SMIM4-202ENST00000476842 ZPR1O75312 459 aa23.13■■□□□ 1.29
SMIM4-202ENST00000476842 KRT24Q2M2I5 525 aa23.13■■□□□ 1.29
SMIM4-202ENST00000476842 NBPF10Q6P3W6 841 aaKnown RBP23.13■■□□□ 1.29
SMIM4-202ENST00000476842 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
SMIM4-202ENST00000476842 NBPF15Q8N660 670 aa23.13■■□□□ 1.29
SMIM4-202ENST00000476842 LRP5O75197 1615 aa23.12■■□□□ 1.29
SMIM4-202ENST00000476842 HOXB7P09629 217 aa23.12■■□□□ 1.29
SMIM4-202ENST00000476842 PIP4K2AP48426 406 aaPredicted RBP23.12■■□□□ 1.29
SMIM4-202ENST00000476842 SRP68Q9UHB9 627 aaKnown RBP23.12■■□□□ 1.29
SMIM4-202ENST00000476842 EIF2S2P20042 333 aaKnown RBP23.11■■□□□ 1.29
SMIM4-202ENST00000476842 ARXQ96QS3 562 aa23.11■■□□□ 1.29
SMIM4-202ENST00000476842 PPP1R1BQ9UD71 204 aaPredicted RBP23.11■■□□□ 1.29
SMIM4-202ENST00000476842 ERBB4Q15303 1308 aa23.1■■□□□ 1.29
SMIM4-202ENST00000476842 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
SMIM4-202ENST00000476842 USPL1Q5W0Q7 1092 aa23.1■■□□□ 1.29
SMIM4-202ENST00000476842 ZNF330Q9Y3S2 320 aaPredicted RBP23.1■■□□□ 1.29
SMIM4-202ENST00000476842 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
SMIM4-202ENST00000476842 TSR2Q969E8 191 aaKnown RBP23.09■■□□□ 1.29
SMIM4-202ENST00000476842 C8orf58Q8NAV2 365 aa23.08■■□□□ 1.29
SMIM4-202ENST00000476842 TBC1D2BQ9UPU7 963 aa23.08■■□□□ 1.29
SMIM4-202ENST00000476842 FKBP8Q14318 412 aa23.07■■□□□ 1.28
SMIM4-202ENST00000476842 PDIA6Q15084 440 aa23.07■■□□□ 1.28
SMIM4-202ENST00000476842 DZIP3Q86Y13 1208 aaKnown RBP23.06■■□□□ 1.28
SMIM4-202ENST00000476842 BCL2L12Q9HB09 334 aa23.06■■□□□ 1.28
SMIM4-202ENST00000476842 SPINK5Q9NQ38 1064 aaPredicted RBP23.06■■□□□ 1.28
SMIM4-202ENST00000476842 ELL2O00472 640 aaPredicted RBP23.05■■□□□ 1.28
SMIM4-202ENST00000476842 MMP10P09238 476 aa23.05■■□□□ 1.28
SMIM4-202ENST00000476842 MYL6BP14649 208 aa23.05■■□□□ 1.28
SMIM4-202ENST00000476842 TM4SF1P30408 202 aa23.05■■□□□ 1.28
SMIM4-202ENST00000476842 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
SMIM4-202ENST00000476842 NECTIN2Q92692 538 aa23.05■■□□□ 1.28
SMIM4-202ENST00000476842 CAMTA2O94983 1202 aa23.04■■□□□ 1.28
SMIM4-202ENST00000476842 GOLGA2Q08379 1002 aa23.04■■□□□ 1.28
SMIM4-202ENST00000476842 CHMP4AQ9BY43 222 aa23.04■■□□□ 1.28
SMIM4-202ENST00000476842 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
SMIM4-202ENST00000476842 COL24A1Q17RW2 1714 aa23.04■■□□□ 1.28
SMIM4-202ENST00000476842 LRP10Q7Z4F1 713 aa23.03■■□□□ 1.28
SMIM4-202ENST00000476842 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
SMIM4-202ENST00000476842 FANCIQ9NVI1 1328 aa23.03■■□□□ 1.28
SMIM4-202ENST00000476842 RGL2O15211 777 aa23.02■■□□□ 1.28
SMIM4-202ENST00000476842 CLEC4GQ6UXB4 293 aa23.02■■□□□ 1.28
SMIM4-202ENST00000476842 TSPYL6Q8N831 410 aa23.02■■□□□ 1.28
SMIM4-202ENST00000476842 PROSER3Q2NL68 480 aa23.01■■□□□ 1.27
SMIM4-202ENST00000476842 FHDC1Q9C0D6 1143 aaPredicted RBP23.01■■□□□ 1.27
SMIM4-202ENST00000476842 DBF4Q9UBU7 674 aaPredicted RBP23.01■■□□□ 1.27
SMIM4-202ENST00000476842 PARP3Q9Y6F1 533 aa23.01■■□□□ 1.27
SMIM4-202ENST00000476842 LAMB4A4D0S4 1761 aa23■■□□□ 1.27
SMIM4-202ENST00000476842 CHPF2Q9P2E5 772 aa23■■□□□ 1.27
SMIM4-202ENST00000476842 C4AP0C0L4 1744 aa22.99■■□□□ 1.27
SMIM4-202ENST00000476842 ERVV-1B6SEH8 477 aa22.99■■□□□ 1.27
SMIM4-202ENST00000476842 ANXA1P04083 346 aa22.99■■□□□ 1.27
SMIM4-202ENST00000476842 NFIXQ14938 502 aa22.99■■□□□ 1.27
SMIM4-202ENST00000476842 TWISTNBQ3B726 338 aaPredicted RBP22.99■■□□□ 1.27
SMIM4-202ENST00000476842 TTLL7Q6ZT98 887 aa22.99■■□□□ 1.27
SMIM4-202ENST00000476842 SYT17Q9BSW7 474 aa22.99■■□□□ 1.27
SMIM4-202ENST00000476842 E9PSI1 815 aa22.98■■□□□ 1.27
SMIM4-202ENST00000476842 POLRMTO00411 1230 aaKnown RBP22.98■■□□□ 1.27
SMIM4-202ENST00000476842 EXOSC9Q06265 439 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms