RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 BRCA1P38398 1863 aaKnown RBP23.51■■□□□ 1.35
LCLAT1-208ENST00000476535 TEX13AQ9BXU3 409 aaPredicted RBP23.51■■□□□ 1.35
LCLAT1-208ENST00000476535 HTATSF1O43719 755 aaKnown RBP23.5■■□□□ 1.35
LCLAT1-208ENST00000476535 FMNL2Q96PY5 1086 aa23.5■■□□□ 1.35
LCLAT1-208ENST00000476535 NARFQ9UHQ1 456 aa23.5■■□□□ 1.35
LCLAT1-208ENST00000476535 DDR1Q08345 913 aa23.49■■□□□ 1.35
LCLAT1-208ENST00000476535 USPL1Q5W0Q7 1092 aa23.49■■□□□ 1.35
LCLAT1-208ENST00000476535 RTF1Q92541 710 aaKnown RBP23.49■■□□□ 1.35
LCLAT1-208ENST00000476535 BTBD11A6QL63 1104 aa23.48■■□□□ 1.35
LCLAT1-208ENST00000476535 TM4SF1P30408 202 aa23.48■■□□□ 1.35
LCLAT1-208ENST00000476535 DLG5Q8TDM6 1919 aa23.47■■□□□ 1.35
LCLAT1-208ENST00000476535 POLRMTO00411 1230 aaKnown RBP23.47■■□□□ 1.35
LCLAT1-208ENST00000476535 EIF5P55010 431 aaKnown RBP23.47■■□□□ 1.35
LCLAT1-208ENST00000476535 CANXP27824 592 aaKnown RBP23.46■■□□□ 1.35
LCLAT1-208ENST00000476535 AFDNP55196 1824 aaKnown RBP23.46■■□□□ 1.35
LCLAT1-208ENST00000476535 NRXN2Q9P2S2 1712 aa23.46■■□□□ 1.35
LCLAT1-208ENST00000476535 WWC3Q9ULE0 1092 aa23.46■■□□□ 1.35
LCLAT1-208ENST00000476535 A0A0G2JLW4 131 aa23.45■■□□□ 1.34
LCLAT1-208ENST00000476535 RALBP1Q15311 655 aa23.45■■□□□ 1.34
LCLAT1-208ENST00000476535 MCM10Q7L590 875 aa23.45■■□□□ 1.34
LCLAT1-208ENST00000476535 ADCY9O60503 1353 aa23.44■■□□□ 1.34
LCLAT1-208ENST00000476535 A0A087WZG4 1122 aa23.44■■□□□ 1.34
LCLAT1-208ENST00000476535 NEFMP07197 916 aa23.44■■□□□ 1.34
LCLAT1-208ENST00000476535 DPEP1P16444 411 aa23.44■■□□□ 1.34
LCLAT1-208ENST00000476535 BCL2L12Q9HB09 334 aa23.44■■□□□ 1.34
LCLAT1-208ENST00000476535 ARFGEF1Q9Y6D6 1849 aa23.44■■□□□ 1.34
LCLAT1-208ENST00000476535 SCN7AQ01118 1682 aa23.44■■□□□ 1.34
LCLAT1-208ENST00000476535 KCNQ3O43525 872 aa23.43■■□□□ 1.34
LCLAT1-208ENST00000476535 NFIXQ14938 502 aa23.43■■□□□ 1.34
LCLAT1-208ENST00000476535 PLEKHF1Q96S99 279 aa23.43■■□□□ 1.34
LCLAT1-208ENST00000476535 IL6STP40189 918 aaPredicted RBP23.42■■□□□ 1.34
LCLAT1-208ENST00000476535 KCNA3P22001 575 aa23.41■■□□□ 1.34
LCLAT1-208ENST00000476535 PNNQ9H307 717 aaKnown RBP23.41■■□□□ 1.34
LCLAT1-208ENST00000476535 ATP10DQ9P241 1426 aa23.41■■□□□ 1.34
LCLAT1-208ENST00000476535 DCTN1Q14203 1278 aa23.4■■□□□ 1.34
LCLAT1-208ENST00000476535 BCS1LQ9Y276 419 aa23.4■■□□□ 1.34
LCLAT1-208ENST00000476535 DDX10Q13206 875 aaKnown RBP23.39■■□□□ 1.33
LCLAT1-208ENST00000476535 A1BGP04217 495 aa23.38■■□□□ 1.33
LCLAT1-208ENST00000476535 SNRPA1P09661 255 aaKnown RBP23.38■■□□□ 1.33
LCLAT1-208ENST00000476535 TAF7Q15545 349 aaPredicted RBP23.38■■□□□ 1.33
LCLAT1-208ENST00000476535 PIM2Q9P1W9 311 aa23.38■■□□□ 1.33
LCLAT1-208ENST00000476535 BCORQ6W2J9 1755 aa23.37■■□□□ 1.33
LCLAT1-208ENST00000476535 NFE2L2Q16236 605 aa23.37■■□□□ 1.33
LCLAT1-208ENST00000476535 USP16Q9Y5T5 823 aa23.37■■□□□ 1.33
LCLAT1-208ENST00000476535 KDM3BQ7LBC6 1761 aa23.37■■□□□ 1.33
LCLAT1-208ENST00000476535 SERPINB2P05120 415 aa23.36■■□□□ 1.33
LCLAT1-208ENST00000476535 DLEC1Q9Y238 1755 aa23.36■■□□□ 1.33
LCLAT1-208ENST00000476535 MAPK8IP3Q9UPT6 1336 aa23.35■■□□□ 1.33
LCLAT1-208ENST00000476535 LAMB4A4D0S4 1761 aa23.35■■□□□ 1.33
LCLAT1-208ENST00000476535 GIGYF1O75420 1035 aaPredicted RBP23.35■■□□□ 1.33
LCLAT1-208ENST00000476535 NPM2Q86SE8 214 aaKnown RBP23.35■■□□□ 1.33
LCLAT1-208ENST00000476535 MYBBP1AQ9BQG0 1328 aaKnown RBP23.34■■□□□ 1.33
LCLAT1-208ENST00000476535 C1QTNF8P60827 252 aa23.34■■□□□ 1.33
LCLAT1-208ENST00000476535 PNISRQ8TF01 805 aaKnown RBP23.34■■□□□ 1.33
LCLAT1-208ENST00000476535 TBC1D2BQ9UPU7 963 aa23.34■■□□□ 1.33
LCLAT1-208ENST00000476535 ZNF330Q9Y3S2 320 aaPredicted RBP23.34■■□□□ 1.33
LCLAT1-208ENST00000476535 PRAMEF22A3QJZ6 481 aa23.33■■□□□ 1.33
LCLAT1-208ENST00000476535 CAMTA2O94983 1202 aa23.33■■□□□ 1.33
LCLAT1-208ENST00000476535 CHRNA5P30532 468 aa23.33■■□□□ 1.33
LCLAT1-208ENST00000476535 DALRD3Q5D0E6 543 aaKnown RBP23.33■■□□□ 1.33
LCLAT1-208ENST00000476535 TBC1D9BQ66K14 1250 aa23.32■■□□□ 1.32
LCLAT1-208ENST00000476535 CARMIL3Q8ND23 1372 aa23.31■■□□□ 1.32
LCLAT1-208ENST00000476535 ARHGAP27Q6ZUM4 889 aa23.31■■□□□ 1.32
LCLAT1-208ENST00000476535 ANKRD31Q8N7Z5 1873 aa23.3■■□□□ 1.32
LCLAT1-208ENST00000476535 BICDL1Q6ZP65 573 aa23.3■■□□□ 1.32
LCLAT1-208ENST00000476535 DZIP3Q86Y13 1208 aaKnown RBP23.3■■□□□ 1.32
LCLAT1-208ENST00000476535 GPBP1L1Q9HC44 474 aaPredicted RBP23.3■■□□□ 1.32
LCLAT1-208ENST00000476535 MIS18AQ9NYP9 233 aa23.29■■□□□ 1.32
LCLAT1-208ENST00000476535 RGL2O15211 777 aa23.28■■□□□ 1.32
LCLAT1-208ENST00000476535 CLEC4GQ6UXB4 293 aa23.28■■□□□ 1.32
LCLAT1-208ENST00000476535 NBPF26B4DH59 902 aa23.27■■□□□ 1.32
LCLAT1-208ENST00000476535 PIP4K2AP48426 406 aaPredicted RBP23.27■■□□□ 1.32
LCLAT1-208ENST00000476535 NBPF10Q6P3W6 841 aaKnown RBP23.27■■□□□ 1.32
LCLAT1-208ENST00000476535 NBPF15Q8N660 670 aa23.27■■□□□ 1.32
LCLAT1-208ENST00000476535 SETDB2Q96T68 719 aa23.27■■□□□ 1.32
LCLAT1-208ENST00000476535 THUMPD2Q9BTF0 503 aaKnown RBP23.27■■□□□ 1.32
LCLAT1-208ENST00000476535 PDZRN3Q9UPQ7 1066 aa23.27■■□□□ 1.32
LCLAT1-208ENST00000476535 SBF1O95248 1867 aa23.26■■□□□ 1.31
LCLAT1-208ENST00000476535 EIF4A1P60842 406 aaKnown RBP23.26■■□□□ 1.31
LCLAT1-208ENST00000476535 PRR5LQ6MZQ0 368 aa23.25■■□□□ 1.31
LCLAT1-208ENST00000476535 BRIP1Q9BX63 1249 aa23.25■■□□□ 1.31
LCLAT1-208ENST00000476535 ZNF652Q9Y2D9 606 aa23.25■■□□□ 1.31
LCLAT1-208ENST00000476535 H0YIN7 160 aa23.24■■□□□ 1.31
LCLAT1-208ENST00000476535 RIPK4P57078 832 aa23.24■■□□□ 1.31
LCLAT1-208ENST00000476535 C2CD5Q86YS7 1000 aa23.24■■□□□ 1.31
LCLAT1-208ENST00000476535 ZNF526Q8TF50 670 aaPredicted RBP23.24■■□□□ 1.31
LCLAT1-208ENST00000476535 COL11A2P13942 1736 aaPredicted RBP23.23■■□□□ 1.31
LCLAT1-208ENST00000476535 PDE6BP35913 854 aa23.23■■□□□ 1.31
LCLAT1-208ENST00000476535 TMPOP42166 694 aaKnown RBP23.23■■□□□ 1.31
LCLAT1-208ENST00000476535 LMOD3Q0VAK6 560 aa23.23■■□□□ 1.31
LCLAT1-208ENST00000476535 TTLL6Q8N841 843 aa23.23■■□□□ 1.31
LCLAT1-208ENST00000476535 CNBD1Q8NA66 436 aa23.23■■□□□ 1.31
LCLAT1-208ENST00000476535 BABAM1Q9NWV8 329 aa23.22■■□□□ 1.31
LCLAT1-208ENST00000476535 C9orf131Q5VYM1 1079 aa23.21■■□□□ 1.31
LCLAT1-208ENST00000476535 PRKRIP1Q9H875 184 aaPredicted RBP23.21■■□□□ 1.31
LCLAT1-208ENST00000476535 ST5P78524 1137 aa23.2■■□□□ 1.3
LCLAT1-208ENST00000476535 WDR43Q15061 677 aaKnown RBP eCLIP23.19■■□□□ 1.3
LCLAT1-208ENST00000476535 TSPYL4Q9UJ04 414 aa23.19■■□□□ 1.3
LCLAT1-208ENST00000476535 ERBB4Q15303 1308 aa23.18■■□□□ 1.3
LCLAT1-208ENST00000476535 NUP98P52948 1817 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms