RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-204	ENST00000475464	SERPINB2	P05120	415 aa		13.83	□□□□□ -0.2
PTP4A2-204	ENST00000475464	LMNB1	P20700	586 aa		13.83	□□□□□ -0.2
PTP4A2-204	ENST00000475464	TTLL6	Q8N841	843 aa		13.83	□□□□□ -0.2
PTP4A2-204	ENST00000475464	SMC1B	Q8NDV3	1235 aa		13.83	□□□□□ -0.2
PTP4A2-204	ENST00000475464	ZBTB1	Q9Y2K1	713 aa		13.83	□□□□□ -0.2
PTP4A2-204	ENST00000475464	COL5A3	P25940	1745 aa	Predicted RBP	13.83	□□□□□ -0.2
PTP4A2-204	ENST00000475464		H0YIN7	160 aa		13.82	□□□□□ -0.2
PTP4A2-204	ENST00000475464	CANX	P27824	592 aa	Known RBP	13.82	□□□□□ -0.2
PTP4A2-204	ENST00000475464	BICDL1	Q6ZP65	573 aa		13.82	□□□□□ -0.2
PTP4A2-204	ENST00000475464	C2CD5	Q86YS7	1000 aa		13.82	□□□□□ -0.2
PTP4A2-204	ENST00000475464	PCNT	O95613	3336 aa		13.81	□□□□□ -0.2
PTP4A2-204	ENST00000475464	STARD3NL	O95772	234 aa		13.81	□□□□□ -0.2
PTP4A2-204	ENST00000475464	MTHFSD	Q2M296	383 aa	Known RBP	13.81	□□□□□ -0.2
PTP4A2-204	ENST00000475464	TTC5	Q8N0Z6	440 aa		13.81	□□□□□ -0.2
PTP4A2-204	ENST00000475464	COL15A1	P39059	1388 aa		13.81	□□□□□ -0.2
PTP4A2-204	ENST00000475464	GLTPD2	A6NH11	291 aa		13.8	□□□□□ -0.2
PTP4A2-204	ENST00000475464	VEGFA	P15692	232 aa	Predicted RBP	13.8	□□□□□ -0.2
PTP4A2-204	ENST00000475464	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.8	□□□□□ -0.2
PTP4A2-204	ENST00000475464	VSIG10	Q8N0Z9	540 aa		13.8	□□□□□ -0.2
PTP4A2-204	ENST00000475464	JMY	Q8N9B5	988 aa		13.8	□□□□□ -0.2
PTP4A2-204	ENST00000475464	BCL2L12	Q9HB09	334 aa		13.8	□□□□□ -0.2
PTP4A2-204	ENST00000475464	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.8	□□□□□ -0.2
PTP4A2-204	ENST00000475464		A0A087WZG4	1122 aa		13.79	□□□□□ -0.2
PTP4A2-204	ENST00000475464	DIAPH1	O60610	1272 aa	Known RBP	13.79	□□□□□ -0.2
PTP4A2-204	ENST00000475464	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.79	□□□□□ -0.2
PTP4A2-204	ENST00000475464	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
PTP4A2-204	ENST00000475464	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.79	□□□□□ -0.2
PTP4A2-204	ENST00000475464	NPM2	Q86SE8	214 aa	Known RBP	13.78	□□□□□ -0.2
PTP4A2-204	ENST00000475464	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.78	□□□□□ -0.2
PTP4A2-204	ENST00000475464	CAPN15	O75808	1086 aa		13.77	□□□□□ -0.21
PTP4A2-204	ENST00000475464	PRELP	P51888	382 aa		13.77	□□□□□ -0.21
PTP4A2-204	ENST00000475464	CNGB1	Q14028	1251 aa	Predicted RBP	13.77	□□□□□ -0.21
PTP4A2-204	ENST00000475464	CC2D1B	Q5T0F9	858 aa	Known RBP	13.77	□□□□□ -0.21
PTP4A2-204	ENST00000475464	DPY19L2	Q6NUT2	758 aa		13.77	□□□□□ -0.21
PTP4A2-204	ENST00000475464	CCER1	Q8TC90	406 aa	Predicted RBP	13.77	□□□□□ -0.21
PTP4A2-204	ENST00000475464	BRCA1	P38398	1863 aa	Known RBP	13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	ARFGEF1	Q9Y6D6	1849 aa		13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	U2SURP	O15042	1029 aa	Known RBP	13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	NPHP1	O15259	732 aa		13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	PDE6B	P35913	854 aa		13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	EIF5	P55010	431 aa	Known RBP	13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	TEF	Q10587	303 aa		13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	TBC1D9B	Q66K14	1250 aa		13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	TBC1D2B	Q9UPU7	963 aa		13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	TJP1	Q07157	1748 aa		13.76	□□□□□ -0.21
PTP4A2-204	ENST00000475464	NFKBIE	O00221	500 aa		13.75	□□□□□ -0.21
PTP4A2-204	ENST00000475464	C21orf2	O43822	256 aa		13.75	□□□□□ -0.21
PTP4A2-204	ENST00000475464	TNS4	Q8IZW8	715 aa		13.75	□□□□□ -0.21
PTP4A2-204	ENST00000475464	CCDC24	Q8N4L8	307 aa		13.75	□□□□□ -0.21
PTP4A2-204	ENST00000475464	ZNF496	Q96IT1	587 aa	Predicted RBP	13.75	□□□□□ -0.21
PTP4A2-204	ENST00000475464	BRIP1	Q9BX63	1249 aa		13.75	□□□□□ -0.21
PTP4A2-204	ENST00000475464	WDR90	Q96KV7	1748 aa		13.74	□□□□□ -0.21
PTP4A2-204	ENST00000475464	GNAT3	A8MTJ3	354 aa		13.74	□□□□□ -0.21
PTP4A2-204	ENST00000475464	ERFE	Q4G0M1	354 aa		13.74	□□□□□ -0.21
PTP4A2-204	ENST00000475464	ZNF790	Q6PG37	636 aa		13.74	□□□□□ -0.21
PTP4A2-204	ENST00000475464	PDZRN3	Q9UPQ7	1066 aa		13.74	□□□□□ -0.21
PTP4A2-204	ENST00000475464	CARMIL3	Q8ND23	1372 aa		13.73	□□□□□ -0.21
PTP4A2-204	ENST00000475464	KIF7	Q2M1P5	1343 aa		13.73	□□□□□ -0.21
PTP4A2-204	ENST00000475464	PRR5L	Q6MZQ0	368 aa		13.73	□□□□□ -0.21
PTP4A2-204	ENST00000475464	IL17RE	Q8NFR9	667 aa		13.73	□□□□□ -0.21
PTP4A2-204	ENST00000475464	GAS2L2	Q8NHY3	880 aa		13.73	□□□□□ -0.21
PTP4A2-204	ENST00000475464	SETDB2	Q96T68	719 aa		13.73	□□□□□ -0.21
PTP4A2-204	ENST00000475464	MRC1	P22897	1456 aa		13.73	□□□□□ -0.21
PTP4A2-204	ENST00000475464	FMNL2	Q96PY5	1086 aa		13.72	□□□□□ -0.21
PTP4A2-204	ENST00000475464	SCN11A	Q9UI33	1791 aa		13.72	□□□□□ -0.21
PTP4A2-204	ENST00000475464	HEG1	Q9ULI3	1381 aa		13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	POTEC	B2RU33	542 aa		13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	PER1	O15534	1290 aa	Predicted RBP	13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	A1BG	P04217	495 aa		13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	HSPA1A	P0DMV8	641 aa	Known RBP	13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	HSPA1B	P0DMV9	641 aa	Known RBP	13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	IL6ST	P40189	918 aa	Predicted RBP	13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	ST5	P78524	1137 aa		13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	CNBD1	Q8NA66	436 aa		13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	CNKSR1	Q969H4	720 aa		13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	ADAMTS7	Q9UKP4	1686 aa		13.71	□□□□□ -0.21
PTP4A2-204	ENST00000475464	TAOK3	Q9H2K8	898 aa		13.7	□□□□□ -0.22
PTP4A2-204	ENST00000475464	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.69	□□□□□ -0.22
PTP4A2-204	ENST00000475464	BTBD11	A6QL63	1104 aa		13.69	□□□□□ -0.22
PTP4A2-204	ENST00000475464	SBF1	O95248	1867 aa		13.69	□□□□□ -0.22
PTP4A2-204	ENST00000475464	DDN	O94850	711 aa	Predicted RBP	13.68	□□□□□ -0.22
PTP4A2-204	ENST00000475464	CAMTA2	O94983	1202 aa		13.68	□□□□□ -0.22
PTP4A2-204	ENST00000475464	SOGA3	Q5TF21	947 aa		13.68	□□□□□ -0.22
PTP4A2-204	ENST00000475464	STYK1	Q6J9G0	422 aa		13.68	□□□□□ -0.22
PTP4A2-204	ENST00000475464	CHADL	Q6NUI6	762 aa		13.68	□□□□□ -0.22
PTP4A2-204	ENST00000475464	PRPF40B	Q6NWY9	871 aa	Known RBP	13.68	□□□□□ -0.22
PTP4A2-204	ENST00000475464	DZIP3	Q86Y13	1208 aa	Known RBP	13.68	□□□□□ -0.22
PTP4A2-204	ENST00000475464	MASTL	Q96GX5	879 aa		13.68	□□□□□ -0.22
PTP4A2-204	ENST00000475464	AFDN	P55196	1824 aa	Known RBP	13.67	□□□□□ -0.22
PTP4A2-204	ENST00000475464	KCNQ3	O43525	872 aa		13.67	□□□□□ -0.22
PTP4A2-204	ENST00000475464	SRGN	P10124	158 aa		13.67	□□□□□ -0.22
PTP4A2-204	ENST00000475464	MKRN1	Q9UHC7	482 aa	Known RBP	13.67	□□□□□ -0.22
PTP4A2-204	ENST00000475464	LTBP3	Q9NS15	1303 aa		13.66	□□□□□ -0.22
PTP4A2-204	ENST00000475464	PIP4K2A	P48426	406 aa	Predicted RBP	13.66	□□□□□ -0.22
PTP4A2-204	ENST00000475464	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.66	□□□□□ -0.22
PTP4A2-204	ENST00000475464	CREBZF	Q9NS37	354 aa		13.66	□□□□□ -0.22
PTP4A2-204	ENST00000475464	NRXN2	Q9P2S2	1712 aa		13.66	□□□□□ -0.22
PTP4A2-204	ENST00000475464	POTEI	P0CG38	1075 aa		13.65	□□□□□ -0.22
PTP4A2-204	ENST00000475464	POTEJ	P0CG39	1038 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms