RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 NLGN2Q8NFZ4 835 aa8.15□□□□□ -1.1
CPSF7-210ENST00000474684 PIGBQ92521 554 aa8.15□□□□□ -1.1
CPSF7-210ENST00000474684 FAM212AQ96EL1 285 aa8.15□□□□□ -1.1
CPSF7-210ENST00000474684 ARXQ96QS3 562 aa8.15□□□□□ -1.1
CPSF7-210ENST00000474684 YY1P25490 414 aa8.14□□□□□ -1.11
CPSF7-210ENST00000474684 NKX1-1Q15270 411 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-210ENST00000474684 AMER1Q5JTC6 1135 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-210ENST00000474684 PLCD3Q8N3E9 789 aa8.14□□□□□ -1.11
CPSF7-210ENST00000474684 LINC00116Q8NCU8 138 aa8.14□□□□□ -1.11
CPSF7-210ENST00000474684 TFCP2L1Q9NZI6 479 aa8.14□□□□□ -1.11
CPSF7-210ENST00000474684 CACNA1SQ13698 1873 aa8.14□□□□□ -1.11
CPSF7-210ENST00000474684 ARFGEF1Q9Y6D6 1849 aa8.14□□□□□ -1.11
CPSF7-210ENST00000474684 PLEKHG2Q9H7P9 1386 aa8.13□□□□□ -1.11
CPSF7-210ENST00000474684 ITPK1Q13572 414 aa8.13□□□□□ -1.11
CPSF7-210ENST00000474684 MARVELD3Q96A59 401 aa8.13□□□□□ -1.11
CPSF7-210ENST00000474684 ASAP1Q9ULH1 1129 aa8.13□□□□□ -1.11
CPSF7-210ENST00000474684 KCPQ6ZWJ8 1503 aa8.13□□□□□ -1.11
CPSF7-210ENST00000474684 DLEC1Q9Y238 1755 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 SCN7AQ01118 1682 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 PHF14O94880 888 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 NUBP1P53384 320 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 EMP3P54852 163 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 MORC1Q86VD1 984 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 SLC16A10Q8TF71 515 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 SLC4A9Q96Q91 983 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.12□□□□□ -1.11
CPSF7-210ENST00000474684 SPG7Q9UQ90 795 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 CCDC88AQ3V6T2 1871 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 BCORQ6W2J9 1755 aa8.12□□□□□ -1.11
CPSF7-210ENST00000474684 LOC102724428A0A0B4J2F2 783 aa8.11□□□□□ -1.11
CPSF7-210ENST00000474684 SIK1P57059 783 aa8.11□□□□□ -1.11
CPSF7-210ENST00000474684 ZNF530Q6P9A1 599 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-210ENST00000474684 IFNL2Q8IZJ0 200 aa8.11□□□□□ -1.11
CPSF7-210ENST00000474684 ATG3Q9NT62 314 aa8.11□□□□□ -1.11
CPSF7-210ENST00000474684 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
CPSF7-210ENST00000474684 SBF1O95248 1867 aa8.11□□□□□ -1.11
CPSF7-210ENST00000474684 ANKRD31Q8N7Z5 1873 aa8.11□□□□□ -1.11
CPSF7-210ENST00000474684 COL11A2P13942 1736 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-210ENST00000474684 NRXN2Q9P2S2 1712 aa8.1□□□□□ -1.11
CPSF7-210ENST00000474684 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.113e-7■■□□□ 12.8
CPSF7-210ENST00000474684 POLD1P28340 1107 aa8.1□□□□□ -1.11
CPSF7-210ENST00000474684 IL13P35225 146 aa8.1□□□□□ -1.11
CPSF7-210ENST00000474684 SMARCC1Q92922 1105 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-210ENST00000474684 AK7Q96M32 723 aa8.1□□□□□ -1.11
CPSF7-210ENST00000474684 LAMB4A4D0S4 1761 aa8.1□□□□□ -1.11
CPSF7-210ENST00000474684 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.09□□□□□ -1.11
CPSF7-210ENST00000474684 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-210ENST00000474684 CC2D1BQ5T0F9 858 aaKnown RBP8.09□□□□□ -1.11
CPSF7-210ENST00000474684 SULT6B1Q6IMI4 303 aa8.09□□□□□ -1.11
CPSF7-210ENST00000474684 WWC3Q9ULE0 1092 aa8.09□□□□□ -1.11
CPSF7-210ENST00000474684 KNSTRNQ9Y448 316 aa8.09□□□□□ -1.11
CPSF7-210ENST00000474684 PXDNLA1KZ92 1463 aa8.08□□□□□ -1.12
CPSF7-210ENST00000474684 GNPATO15228 680 aa8.08□□□□□ -1.12
CPSF7-210ENST00000474684 HMOX1P09601 288 aa8.08□□□□□ -1.12
CPSF7-210ENST00000474684 ATP6V1AP38606 617 aa8.08□□□□□ -1.12
CPSF7-210ENST00000474684 CNGB1Q14028 1251 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-210ENST00000474684 C3orf67Q6ZVT6 689 aa8.08□□□□□ -1.12
CPSF7-210ENST00000474684 L3MBTL3Q96JM7 780 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-210ENST00000474684 C10orf71Q711Q0 1435 aa8.08□□□□□ -1.12
CPSF7-210ENST00000474684 KDM3BQ7LBC6 1761 aa8.07□□□□□ -1.12
CPSF7-210ENST00000474684 SSFA2P28290 1259 aa8.07□□□□□ -1.12
CPSF7-210ENST00000474684 MTHFSP49914 203 aa8.07□□□□□ -1.12
CPSF7-210ENST00000474684 PLEKHO1Q53GL0 409 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-210ENST00000474684 ZNF784Q8NCA9 323 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-210ENST00000474684 DCAF5Q96JK2 942 aa8.07□□□□□ -1.12
CPSF7-210ENST00000474684 NPC1L1Q9UHC9 1359 aa8.07□□□□□ -1.12
CPSF7-210ENST00000474684 TIAM2Q8IVF5 1701 aa8.06□□□□□ -1.12
CPSF7-210ENST00000474684 CNTNAP4Q9C0A0 1308 aa8.06□□□□□ -1.12
CPSF7-210ENST00000474684 GPR162Q16538 588 aa8.06□□□□□ -1.12
CPSF7-210ENST00000474684 HS3ST6Q96QI5 342 aa8.06□□□□□ -1.12
CPSF7-210ENST00000474684 ADCY9O60503 1353 aa8.06□□□□□ -1.12
CPSF7-210ENST00000474684 ARFGEF2Q9Y6D5 1785 aa8.05□□□□□ -1.12
CPSF7-210ENST00000474684 ERVV-2B6SEH9 535 aa8.05□□□□□ -1.12
CPSF7-210ENST00000474684 CABP4P57796 275 aa8.05□□□□□ -1.12
CPSF7-210ENST00000474684 AMOTQ4VCS5 1084 aa8.05□□□□□ -1.12
CPSF7-210ENST00000474684 C1orf141Q5JVX7 400 aa8.05□□□□□ -1.12
CPSF7-210ENST00000474684 FLAD1Q8NFF5 587 aa8.05□□□□□ -1.12
CPSF7-210ENST00000474684 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
CPSF7-210ENST00000474684 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
CPSF7-210ENST00000474684 ATP10DQ9P241 1426 aa8.04□□□□□ -1.12
CPSF7-210ENST00000474684 PTCD1O75127 700 aaKnown RBP8.04□□□□□ -1.12
CPSF7-210ENST00000474684 HSP90AB1P08238 724 aaKnown RBP8.04□□□□□ -1.12
CPSF7-210ENST00000474684 MMP10P09238 476 aa8.04□□□□□ -1.12
CPSF7-210ENST00000474684 MTHFSDQ2M296 383 aaKnown RBP8.04□□□□□ -1.12
CPSF7-210ENST00000474684 NFATC2IPQ8NCF5 419 aa8.04□□□□□ -1.12
CPSF7-210ENST00000474684 LGR6Q9HBX8 967 aa8.04□□□□□ -1.12
CPSF7-210ENST00000474684 DICER1Q9UPY3 1922 aaKnown RBP8.03□□□□□ -1.12
CPSF7-210ENST00000474684 CRKLP46109 303 aaKnown RBP8.03□□□□□ -1.12
CPSF7-210ENST00000474684 SLC39A6Q13433 755 aa8.03□□□□□ -1.12
CPSF7-210ENST00000474684 DNAJC10Q8IXB1 793 aa8.03□□□□□ -1.12
CPSF7-210ENST00000474684 SLC52A2Q9HAB3 445 aa8.03□□□□□ -1.12
CPSF7-210ENST00000474684 SRP68Q9UHB9 627 aaKnown RBP8.03□□□□□ -1.12
CPSF7-210ENST00000474684 NUP98P52948 1817 aa8.03□□□□□ -1.12
CPSF7-210ENST00000474684 FER1L6Q2WGJ9 1857 aa8.02□□□□□ -1.12
CPSF7-210ENST00000474684 FAM205CA6NFA0 338 aa8.02□□□□□ -1.13
CPSF7-210ENST00000474684 RNMTO43148 476 aaKnown RBP8.02□□□□□ -1.13
CPSF7-210ENST00000474684 DIAPH1O60610 1272 aaKnown RBP8.02□□□□□ -1.13
CPSF7-210ENST00000474684 GYS1P13807 737 aa8.02□□□□□ -1.13
CPSF7-210ENST00000474684 AKAP4Q5JQC9 854 aa8.02□□□□□ -1.13
CPSF7-210ENST00000474684 ARHGEF1Q92888 912 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms